RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 ZP3P21754 424 aa10.89□□□□□ -0.67
PTCH1-202ENST00000375271 CNTFRP26992 372 aa10.89□□□□□ -0.67
PTCH1-202ENST00000375271 RAB40BQ12829 278 aa10.89□□□□□ -0.67
PTCH1-202ENST00000375271 KIAA0141Q14154 515 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-202ENST00000375271 LRRC36Q1X8D7 754 aa10.89□□□□□ -0.67
PTCH1-202ENST00000375271 ZIK1Q3SY52 487 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-202ENST00000375271 MORN2Q502X0 79 aa10.89□□□□□ -0.67
PTCH1-202ENST00000375271 ZNF529Q6P280 563 aa10.89□□□□□ -0.67
PTCH1-202ENST00000375271 UNQ5815/PRO19632Q6UWF5 114 aa10.89□□□□□ -0.67
PTCH1-202ENST00000375271 HAPLN4Q86UW8 402 aa10.89□□□□□ -0.67
PTCH1-202ENST00000375271 JAGN1Q8N5M9 183 aa10.89□□□□□ -0.67
PTCH1-202ENST00000375271 RBMXL1Q96E39 390 aaKnown RBP10.89□□□□□ -0.67
PTCH1-202ENST00000375271 MS4A10Q96PG2 267 aa10.89□□□□□ -0.67
PTCH1-202ENST00000375271 SLA2Q9H6Q3 261 aa10.89□□□□□ -0.67
PTCH1-202ENST00000375271 ABRACLQ9P1F3 81 aa10.89□□□□□ -0.67
PTCH1-202ENST00000375271 STEAP1Q9UHE8 339 aa10.89□□□□□ -0.67
PTCH1-202ENST00000375271 C13orf42A0A1B0GVH6 325 aa10.88□□□□□ -0.67
PTCH1-202ENST00000375271 H7C2Y5 167 aa10.88□□□□□ -0.67
PTCH1-202ENST00000375271 MAS1P04201 325 aa10.88□□□□□ -0.67
PTCH1-202ENST00000375271 RCC1P18754 421 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-202ENST00000375271 PPP1CCP36873 323 aaKnown RBP10.88□□□□□ -0.67
PTCH1-202ENST00000375271 AWAT2Q6E213 333 aa10.88□□□□□ -0.67
PTCH1-202ENST00000375271 RPL22L1Q6P5R6 122 aaKnown RBP10.88□□□□□ -0.67
PTCH1-202ENST00000375271 TMPRSS11AQ6ZMR5 421 aa10.88□□□□□ -0.67
PTCH1-202ENST00000375271 PPP1R27Q86WC6 154 aa10.88□□□□□ -0.67
PTCH1-202ENST00000375271 GALMQ96C23 342 aa10.88□□□□□ -0.67
PTCH1-202ENST00000375271 NABP2Q9BQ15 211 aa10.88□□□□□ -0.67
PTCH1-202ENST00000375271 FBXL15Q9H469 300 aa10.88□□□□□ -0.67
PTCH1-202ENST00000375271 A0A1W2PP11 408 aa10.87□□□□□ -0.67
PTCH1-202ENST00000375271 UBE2QL1A1L167 161 aa10.87□□□□□ -0.67
PTCH1-202ENST00000375271 A8MZ25 164 aa10.87□□□□□ -0.67
PTCH1-202ENST00000375271 EI24O14681 340 aa10.87□□□□□ -0.67
PTCH1-202ENST00000375271 CRTAPO75718 401 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-202ENST00000375271 TRGV3P03979 118 aa10.87□□□□□ -0.67
PTCH1-202ENST00000375271 VHLP40337 213 aa10.87□□□□□ -0.67
PTCH1-202ENST00000375271 GTF2A1P52655 376 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-202ENST00000375271 GNMTQ14749 295 aa10.87□□□□□ -0.67
PTCH1-202ENST00000375271 TATDN3Q17R31 274 aa10.87□□□□□ -0.67
PTCH1-202ENST00000375271 CCDC58Q4VC31 144 aa10.87□□□□□ -0.67
PTCH1-202ENST00000375271 C6orf141Q5SZD1 244 aa10.87□□□□□ -0.67
PTCH1-202ENST00000375271 GLIPR1L1Q6UWM5 242 aa10.87□□□□□ -0.67
PTCH1-202ENST00000375271 FAM131AQ6UXB0 335 aa10.87□□□□□ -0.67
PTCH1-202ENST00000375271 ZNF554Q86TJ5 538 aa10.87□□□□□ -0.67
PTCH1-202ENST00000375271 NPBQ8NG41 125 aa10.87□□□□□ -0.67
PTCH1-202ENST00000375271 OR52L2PQ8NGH6 319 aa10.87□□□□□ -0.67
PTCH1-202ENST00000375271 MUL1Q969V5 352 aa10.87□□□□□ -0.67
PTCH1-202ENST00000375271 SLC7A6OSQ96CW6 309 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-202ENST00000375271 SELENOIQ9C0D9 397 aa10.87□□□□□ -0.67
PTCH1-202ENST00000375271 RANGRFQ9HD47 186 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-202ENST00000375271 AMBNQ9NP70 447 aa10.87□□□□□ -0.67
PTCH1-202ENST00000375271 PIPOXQ9P0Z9 390 aa10.87□□□□□ -0.67
PTCH1-202ENST00000375271 RPL36Q9Y3U8 105 aaKnown RBP10.87□□□□□ -0.67
PTCH1-202ENST00000375271 STARD9Q9P2P6 4700 aa10.86□□□□□ -0.67
PTCH1-202ENST00000375271 SAA2-SAA4A0A096LPE2 208 aa10.86□□□□□ -0.67
PTCH1-202ENST00000375271 RRHO14718 337 aa10.86□□□□□ -0.67
PTCH1-202ENST00000375271 SLC25A17O43808 307 aa10.86□□□□□ -0.67
PTCH1-202ENST00000375271 NDUFA3O95167 84 aa10.86□□□□□ -0.67
PTCH1-202ENST00000375271 IGLV1-51P01701 117 aa10.86□□□□□ -0.67
PTCH1-202ENST00000375271 TFAP2AP05549 437 aa10.86□□□□□ -0.67
PTCH1-202ENST00000375271 SAA2P0DJI9 122 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-202ENST00000375271 FUT3P21217 361 aa10.86□□□□□ -0.67
PTCH1-202ENST00000375271 OR3A3P47888 321 aa10.86□□□□□ -0.67
PTCH1-202ENST00000375271 CX3CL1P78423 397 aa10.86□□□□□ -0.67
PTCH1-202ENST00000375271 ADARB1P78563 741 aaKnown RBP10.86□□□□□ -0.67
PTCH1-202ENST00000375271 LCN12Q6JVE5 192 aa10.86□□□□□ -0.67
PTCH1-202ENST00000375271 IL1F10Q8WWZ1 152 aa10.86□□□□□ -0.67
PTCH1-202ENST00000375271 CLCC1Q96S66 551 aa10.86□□□□□ -0.67
PTCH1-202ENST00000375271 C19orf73Q9NVV2 129 aa10.86□□□□□ -0.67
PTCH1-202ENST00000375271 CNOT2Q9NZN8 540 aaKnown RBP10.86□□□□□ -0.67
PTCH1-202ENST00000375271 RCC2Q9P258 522 aaKnown RBP10.86□□□□□ -0.67
PTCH1-202ENST00000375271 LRRC42Q9Y546 428 aa10.86□□□□□ -0.67
PTCH1-202ENST00000375271 A0A0G2JLM5 398 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 OR5H14A6NHG9 310 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 FAM90A7PA6NKC0 464 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 FAM90A23PA8MXZ1 464 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 RAB29O14966 203 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 YPEL1O60688 119 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 RBBP9O75884 186 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 ALPLP05186 524 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 MC5RP33032 325 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 ALDH3A2P51648 485 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 HTD2P86397 168 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 NDPQ00604 133 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 MED21Q13503 144 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 HAGHQ16775 308 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 FAM71F2Q6NXP2 309 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 CD200R1LQ6Q8B3 271 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 ZNF833PQ6ZTB9 187 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 LFNGQ8NES3 379 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 OR52I1Q8NGK6 324 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 RGP1Q92546 391 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-202ENST00000375271 RITA1Q96K30 269 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 RDH12Q96NR8 316 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 YPEL2Q96QA6 119 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 FAM103A1Q9BTL3 118 aaKnown RBP10.85□□□□□ -0.67
PTCH1-202ENST00000375271 BANF2Q9H503 90 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 CHMP1AQ9HD42 196 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-202ENST00000375271 METTL1Q9UBP6 276 aaKnown RBP10.85□□□□□ -0.67
PTCH1-202ENST00000375271 AASSQ9UDR5 926 aa10.85□□□□□ -0.67
PTCH1-202ENST00000375271 SLC22A1O15245 554 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms