RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 WDR13Q9H1Z4 485 aa7□□□□□ -1.29
UBR4-202ENST00000375224 POLDIP2Q9Y2S7 368 aa7□□□□□ -1.29
UBR4-202ENST00000375224 SERTM2A0A1B0GWG4 89 aa7□□□□□ -1.29
UBR4-202ENST00000375224 MSTNO14793 375 aa7□□□□□ -1.29
UBR4-202ENST00000375224 TK1P04183 234 aa7□□□□□ -1.29
UBR4-202ENST00000375224 C1orf174Q8IYL3 243 aa7□□□□□ -1.29
UBR4-202ENST00000375224 FAM58AQ8N1B3 248 aa7□□□□□ -1.29
UBR4-202ENST00000375224 POC1AQ8NBT0 407 aa7□□□□□ -1.29
UBR4-202ENST00000375224 PRSS33Q8NF86 280 aa7□□□□□ -1.29
UBR4-202ENST00000375224 OR4A4PQ8NGN8 299 aa7□□□□□ -1.29
UBR4-202ENST00000375224 RTN4IP1Q8WWV3 396 aaPredicted RBP7□□□□□ -1.29
UBR4-202ENST00000375224 DYRK2Q92630 601 aa7□□□□□ -1.29
UBR4-202ENST00000375224 Q9N2K0 584 aa7□□□□□ -1.29
UBR4-202ENST00000375224 OBP2BQ9NPH6 170 aa7□□□□□ -1.29
UBR4-202ENST00000375224 ZNF581Q9P0T4 197 aa7□□□□□ -1.29
UBR4-202ENST00000375224 FAM221AA4D161 298 aa7□□□□□ -1.29
UBR4-202ENST00000375224 LRP5LA4QPB2 252 aa7□□□□□ -1.29
UBR4-202ENST00000375224 NKX6-3A6NJ46 265 aa7□□□□□ -1.29
UBR4-202ENST00000375224 CYB5BO43169 146 aa7□□□□□ -1.29
UBR4-202ENST00000375224 NAPSAO96009 420 aa7□□□□□ -1.29
UBR4-202ENST00000375224 IRF2P14316 349 aa7□□□□□ -1.29
UBR4-202ENST00000375224 COX5AP20674 150 aa7□□□□□ -1.29
UBR4-202ENST00000375224 CA6P23280 308 aa7□□□□□ -1.29
UBR4-202ENST00000375224 FGF8P55075 233 aaPredicted RBP7□□□□□ -1.29
UBR4-202ENST00000375224 FXYD4P59646 89 aa7□□□□□ -1.29
UBR4-202ENST00000375224 SRPXP78539 464 aa7□□□□□ -1.29
UBR4-202ENST00000375224 NAAAQ02083 359 aa7□□□□□ -1.29
UBR4-202ENST00000375224 C17orf78Q8N4C9 275 aa7□□□□□ -1.29
UBR4-202ENST00000375224 LRTM2Q8N967 370 aa7□□□□□ -1.29
UBR4-202ENST00000375224 RNF126Q9BV68 326 aa7□□□□□ -1.29
UBR4-202ENST00000375224 OR51I2Q9H344 312 aa7□□□□□ -1.29
UBR4-202ENST00000375224 CACFD1Q9UGQ2 172 aa7□□□□□ -1.29
UBR4-202ENST00000375224 PUS1Q9Y606 427 aaKnown RBP eCLIP7□□□□□ -1.29
UBR4-202ENST00000375224 TRBV6-6A0A0A6YYG2 114 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 LYZL6O75951 148 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 GCGP01275 180 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 SCGB2A2Q13296 93 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 PDCD1Q15116 288 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 KRTCAP3Q53RY4 240 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 SMIM12Q96EX1 92 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 OR10C1Q96KK4 312 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 ARV1Q9H2C2 271 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 PLSCR4Q9NRQ2 329 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 CRIM1Q9NZV1 1036 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 PIGBOS1A0A0B4J2F0 54 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.99□□□□□ -1.29
UBR4-202ENST00000375224 IQCF6A8MYZ5 107 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 SYNGR1O43759 233 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 SLC25A17O43808 307 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 SCGB1D1O95968 90 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 PPYP01298 95 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 PPBPP02775 128 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 GZMBP10144 247 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 MDH2P40926 338 aaKnown RBP6.99□□□□□ -1.29
UBR4-202ENST00000375224 KIR2DL2P43627 348 aaPredicted RBP6.99□□□□□ -1.29
UBR4-202ENST00000375224 DVL1P1P54792 670 aaPredicted RBP6.99□□□□□ -1.29
UBR4-202ENST00000375224 UCP2P55851 309 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 UBE2KP61086 200 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 PAX5Q02548 391 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 IL15RAQ13261 267 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 IAH1Q2TAA2 248 aaPredicted RBP6.99□□□□□ -1.29
UBR4-202ENST00000375224 ACSF3Q4G176 576 aaPredicted RBP6.99□□□□□ -1.29
UBR4-202ENST00000375224 LGI3Q8N145 548 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 AQP10Q96PS8 301 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 KCNJ16Q9NPI9 418 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 SLC2A9Q9NRM0 540 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 PROCRQ9UNN8 238 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 ATP23Q9Y6H3 246 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 TAAR5O14804 337 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 TM4SF5O14894 197 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 RAB7AP51149 207 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 TMEM187Q14656 261 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 P2RY6Q15077 328 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 FAM180AQ6UWF9 173 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 LIAT1Q6ZQX7 453 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 C9orf106Q8NAJ2 232 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 SUMF2Q8NBJ7 301 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 OR1L6Q8NGR2 347 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 SECTM1Q8WVN6 248 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 EIF5A2Q9GZV4 153 aaKnown RBP6.99□□□□□ -1.29
UBR4-202ENST00000375224 LIME1Q9H400 295 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 TUBD1Q9UJT1 453 aa6.99□□□□□ -1.29
UBR4-202ENST00000375224 F8VVB4 439 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 F8VWA3 439 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 ZNHIT1O43257 154 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 FGF16O43320 207 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 HIST1H2BKO60814 126 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 HIST1H2BJP06899 126 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 AADACP22760 399 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 HIST1H2BOP23527 126 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 S100GP29377 79 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 CHRNB4P30926 498 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 HIST1H2BBP33778 126 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 HIST1H2BDP58876 126 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 HIST1H2BCP62807 126 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 RAB32Q13637 225 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 DAZAP2Q15038 168 aaPredicted RBP6.98□□□□□ -1.29
UBR4-202ENST00000375224 HIST2H2BEQ16778 126 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.98□□□□□ -1.29
UBR4-202ENST00000375224 SPATA46Q5T0L3 261 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms