RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 ZNF471Q9BX82 626 aaPredicted RBP10.44□□□□□ -0.74
PRPF4-202ENST00000374199 DYSFO75923 2080 aa10.44□□□□□ -0.74
PRPF4-202ENST00000374199 ITPR1Q14643 2758 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 RNF212BA8MTL3 300 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 NUDT19A8MXV4 375 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 F5H0A9 414 aaPredicted RBP10.43□□□□□ -0.74
PRPF4-202ENST00000374199 ADAM20O43506 726 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 JTBO76095 146 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 TMEM33P57088 247 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 TNFAIP6P98066 277 aaPredicted RBP10.43□□□□□ -0.74
PRPF4-202ENST00000374199 MIDNQ504T8 468 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 GPR146Q96CH1 333 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 SAT2Q96F10 170 aaPredicted RBP10.43□□□□□ -0.74
PRPF4-202ENST00000374199 GSKIPQ9P0R6 139 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 FBXL17Q9UF56 701 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 PTPRQQ9UMZ3 2332 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 IGHV3-64DA0A0J9YX35 117 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 FAM90A26D6RGX4 464 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 SIGLEC5O15389 551 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 S100GP29377 79 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 TAS2R30P59541 319 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 ADORA2A-AS1P86434 159 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 Q6ZRM9 215 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 FAM219AQ8IW50 185 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 OR52L2PQ8NGH6 319 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 HEATR1Q9H583 2144 aaKnown RBP10.43□□□□□ -0.74
PRPF4-202ENST00000374199 FAM90A9PA6NNJ1 464 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 OR4A8P0C604 315 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 SSTR5P35346 364 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 ARHGDIBP52566 201 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 MORN2Q502X0 79 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 OR10A7Q8NGE5 316 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 DDB2Q92466 427 aa10.43□□□□□ -0.74
PRPF4-202ENST00000374199 RNASE6Q93091 150 aaKnown RBP10.43□□□□□ -0.74
PRPF4-202ENST00000374199 BSCL2Q96G97 398 aaPredicted RBP10.43□□□□□ -0.74
PRPF4-202ENST00000374199 SPRY3O43610 288 aa10.42□□□□□ -0.74
PRPF4-202ENST00000374199 SPP1P10451 314 aa10.42□□□□□ -0.74
PRPF4-202ENST00000374199 CHRNB4P30926 498 aa10.42□□□□□ -0.74
PRPF4-202ENST00000374199 SULT1A2P50226 295 aa10.42□□□□□ -0.74
PRPF4-202ENST00000374199 SELENOVP59797 346 aa10.42□□□□□ -0.74
PRPF4-202ENST00000374199 S100A10P60903 97 aa10.42□□□□□ -0.74
PRPF4-202ENST00000374199 BAXQ07812 192 aa10.42□□□□□ -0.74
PRPF4-202ENST00000374199 ZNF596Q8TC21 504 aa10.42□□□□□ -0.74
PRPF4-202ENST00000374199 GPHA2Q96T91 129 aa10.42□□□□□ -0.74
PRPF4-202ENST00000374199 RAB19A4D1S5 217 aa10.42□□□□□ -0.74
PRPF4-202ENST00000374199 SIAH2O43255 324 aa10.42□□□□□ -0.74
PRPF4-202ENST00000374199 RPL30P62888 115 aaKnown RBP10.42□□□□□ -0.74
PRPF4-202ENST00000374199 SMCO1Q147U7 214 aa10.42□□□□□ -0.74
PRPF4-202ENST00000374199 C10orf91Q5T1B1 145 aa10.42□□□□□ -0.74
PRPF4-202ENST00000374199 RPL7L1Q6DKI1 246 aaKnown RBP10.42□□□□□ -0.74
PRPF4-202ENST00000374199 UQCC3Q6UW78 93 aa10.42□□□□□ -0.74
PRPF4-202ENST00000374199 MRGPRDQ8TDS7 321 aa10.42□□□□□ -0.74
PRPF4-202ENST00000374199 IL1F10Q8WWZ1 152 aa10.42□□□□□ -0.74
PRPF4-202ENST00000374199 PARD6GQ9BYG4 376 aaPredicted RBP10.42□□□□□ -0.74
PRPF4-202ENST00000374199 LPAR3Q9UBY5 353 aa10.42□□□□□ -0.74
PRPF4-202ENST00000374199 CEP295Q9C0D2 2601 aa10.41□□□□□ -0.74
PRPF4-202ENST00000374199 E7EQL1 145 aa10.41□□□□□ -0.74
PRPF4-202ENST00000374199 TNFSF4P23510 183 aa10.41□□□□□ -0.74
PRPF4-202ENST00000374199 NUP62P37198 522 aaPredicted RBP10.41□□□□□ -0.74
PRPF4-202ENST00000374199 EIF5AP63241 154 aaKnown RBP10.41□□□□□ -0.74
PRPF4-202ENST00000374199 MEX3BQ6ZN04 569 aaKnown RBP10.41□□□□□ -0.74
PRPF4-202ENST00000374199 PPP1R35Q8TAP8 253 aa10.41□□□□□ -0.74
PRPF4-202ENST00000374199 IFI27L2Q9H2X8 130 aa10.41□□□□□ -0.74
PRPF4-202ENST00000374199 PLEKHF2Q9H8W4 249 aa10.41□□□□□ -0.74
PRPF4-202ENST00000374199 OR6C3Q9NZP0 311 aa10.41□□□□□ -0.74
PRPF4-202ENST00000374199 KAAG1Q9UBP8 84 aa10.41□□□□□ -0.74
PRPF4-202ENST00000374199 MMP24Q9Y5R2 645 aa10.41□□□□□ -0.74
PRPF4-202ENST00000374199 IGSF23A1L1A6 192 aa10.41□□□□□ -0.74
PRPF4-202ENST00000374199 RBFOX2O43251 390 aaKnown RBP eCLIP10.41□□□□□ -0.74
PRPF4-202ENST00000374199 SEC11BP0C7V7 166 aa10.41□□□□□ -0.74
PRPF4-202ENST00000374199 NKX2-1P43699 371 aaPredicted RBP10.41□□□□□ -0.74
PRPF4-202ENST00000374199 Q3ZCU0 254 aa10.41□□□□□ -0.74
PRPF4-202ENST00000374199 CXorf66Q5JRM2 361 aaPredicted RBP10.41□□□□□ -0.74
PRPF4-202ENST00000374199 FAM53AQ6NSI3 398 aaPredicted RBP10.41□□□□□ -0.74
PRPF4-202ENST00000374199 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.41□□□□□ -0.74
PRPF4-202ENST00000374199 RNF141Q8WVD5 230 aa10.41□□□□□ -0.74
PRPF4-202ENST00000374199 PCNPQ8WW12 178 aaKnown RBP10.41□□□□□ -0.74
PRPF4-202ENST00000374199 GABRA2P47869 451 aa10.41□□□□□ -0.74
PRPF4-202ENST00000374199 EWSR1Q01844 656 aaKnown RBP eCLIP10.41□□□□□ -0.74
PRPF4-202ENST00000374199 FAM74A1Q5RGS3 127 aa10.41□□□□□ -0.74
PRPF4-202ENST00000374199 OR2C3Q8N628 320 aa10.41□□□□□ -0.74
PRPF4-202ENST00000374199 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.41□□□□□ -0.74
PRPF4-202ENST00000374199 HSD17B10Q99714 261 aaKnown RBP10.41□□□□□ -0.74
PRPF4-202ENST00000374199 NGBQ9NPG2 151 aa10.41□□□□□ -0.74
PRPF4-202ENST00000374199 WSB1Q9Y6I7 421 aa10.41□□□□□ -0.74
PRPF4-202ENST00000374199 KBTBD11-OT1A0A1B0GTJ5 212 aa10.4□□□□□ -0.74
PRPF4-202ENST00000374199 TMEM178BH3BS89 294 aa10.4□□□□□ -0.74
PRPF4-202ENST00000374199 TXNL1O43396 289 aa10.4□□□□□ -0.74
PRPF4-202ENST00000374199 TNFSF12O43508 249 aa10.4□□□□□ -0.74
PRPF4-202ENST00000374199 OR8U9P0C7N5 309 aa10.4□□□□□ -0.74
PRPF4-202ENST00000374199 SFTPCP11686 197 aa10.4□□□□□ -0.74
PRPF4-202ENST00000374199 TNFRSF1AP19438 455 aa10.4□□□□□ -0.74
PRPF4-202ENST00000374199 C8orf31Q8N9H6 132 aa10.4□□□□□ -0.74
PRPF4-202ENST00000374199 OR8U1Q8NH10 309 aa10.4□□□□□ -0.74
PRPF4-202ENST00000374199 ZNF251Q9BRH9 671 aa10.4□□□□□ -0.74
PRPF4-202ENST00000374199 ESRP2Q9H6T0 727 aaKnown RBP10.4□□□□□ -0.74
PRPF4-202ENST00000374199 CLN8Q9UBY8 286 aa10.4□□□□□ -0.74
PRPF4-202ENST00000374199 HSPB7Q9UBY9 170 aa10.4□□□□□ -0.74
PRPF4-202ENST00000374199 LSM5Q9Y4Y9 91 aaKnown RBP10.4□□□□□ -0.74
PRPF4-202ENST00000374199 LOC105371267A0A1B0GV96 52 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms