RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 DCKP27707 260 aa10.09□□□□□ -0.79
TRAPPC3-201ENST00000373159 SLURP1P55000 103 aa10.09□□□□□ -0.79
TRAPPC3-201ENST00000373159 HTD2P86397 168 aa10.09□□□□□ -0.79
TRAPPC3-201ENST00000373159 GLIPR1L1Q6UWM5 242 aa10.09□□□□□ -0.79
TRAPPC3-201ENST00000373159 TMPRSS11AQ6ZMR5 421 aa10.09□□□□□ -0.79
TRAPPC3-201ENST00000373159 ZNF833PQ6ZTB9 187 aa10.09□□□□□ -0.79
TRAPPC3-201ENST00000373159 TCTEX1D1Q8N7M0 179 aa10.09□□□□□ -0.79
TRAPPC3-201ENST00000373159 OR52L2PQ8NGH6 319 aa10.09□□□□□ -0.79
TRAPPC3-201ENST00000373159 SMIM19Q96E16 107 aa10.09□□□□□ -0.79
TRAPPC3-201ENST00000373159 YPEL2Q96QA6 119 aa10.09□□□□□ -0.79
TRAPPC3-201ENST00000373159 ABHD14AQ9BUJ0 271 aa10.09□□□□□ -0.79
TRAPPC3-201ENST00000373159 CST11Q9H112 138 aa10.09□□□□□ -0.79
TRAPPC3-201ENST00000373159 GAR1Q9NY12 217 aaKnown RBP10.09□□□□□ -0.79
TRAPPC3-201ENST00000373159 KIAA1456Q9P272 454 aa10.09□□□□□ -0.79
TRAPPC3-201ENST00000373159 CKLFQ9UBR5 152 aa10.09□□□□□ -0.79
TRAPPC3-201ENST00000373159 JPT1Q9UK76 154 aa10.09□□□□□ -0.79
TRAPPC3-201ENST00000373159 LRRC42Q9Y546 428 aa10.09□□□□□ -0.79
TRAPPC3-201ENST00000373159 NUBP2Q9Y5Y2 271 aa10.09□□□□□ -0.79
TRAPPC3-201ENST00000373159 LOC100130705A0A1B0GUX0 176 aa10.08□□□□□ -0.8
TRAPPC3-201ENST00000373159 H3BNX3 289 aa10.08□□□□□ -0.8
TRAPPC3-201ENST00000373159 ARPC1BO15143 372 aaKnown RBP10.08□□□□□ -0.8
TRAPPC3-201ENST00000373159 LDLRAD4O15165 306 aa10.08□□□□□ -0.8
TRAPPC3-201ENST00000373159 HSPB1P04792 205 aaKnown RBP10.08□□□□□ -0.8
TRAPPC3-201ENST00000373159 LGALS1P09382 135 aaKnown RBP10.08□□□□□ -0.8
TRAPPC3-201ENST00000373159 ETV1P50549 477 aa10.08□□□□□ -0.8
TRAPPC3-201ENST00000373159 CX3CL1P78423 397 aa10.08□□□□□ -0.8
TRAPPC3-201ENST00000373159 GNMTQ14749 295 aa10.08□□□□□ -0.8
TRAPPC3-201ENST00000373159 OR2G6Q5TZ20 316 aa10.08□□□□□ -0.8
TRAPPC3-201ENST00000373159 CDH26Q8IXH8 852 aa10.08□□□□□ -0.8
TRAPPC3-201ENST00000373159 APH1BQ8WW43 257 aa10.08□□□□□ -0.8
TRAPPC3-201ENST00000373159 ARPC1AQ92747 370 aa10.08□□□□□ -0.8
TRAPPC3-201ENST00000373159 GHSRQ92847 366 aa10.08□□□□□ -0.8
TRAPPC3-201ENST00000373159 MUL1Q969V5 352 aa10.08□□□□□ -0.8
TRAPPC3-201ENST00000373159 RDH12Q96NR8 316 aa10.08□□□□□ -0.8
TRAPPC3-201ENST00000373159 OR4C12Q96R67 309 aa10.08□□□□□ -0.8
TRAPPC3-201ENST00000373159 EDA2RQ9HAV5 297 aa10.08□□□□□ -0.8
TRAPPC3-201ENST00000373159 FOXA2Q9Y261 457 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC3-201ENST00000373159 FBXO7Q9Y3I1 522 aa10.08□□□□□ -0.8
TRAPPC3-201ENST00000373159 TRAV8-7A0A075B6U6 113 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 IGHV4OR15-8A0A075B7B6 117 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 A0A087WW49 117 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 A0A1W2PN81 502 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 UBE2QL1A1L167 161 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 A8MZ25 164 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 RGS11O94810 467 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 EGR2P11161 476 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 FSTP19883 344 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 CHRNA7P36544 502 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 PPP1CCP36873 323 aaKnown RBP10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 OR3A3P47888 321 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 RPS11P62280 158 aaKnown RBP eCLIP10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 NDPQ00604 133 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 TMEM267Q0VDI3 215 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 ECSCRQ19T08 205 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 Q499Y3 187 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 DMKNQ6E0U4 476 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 ZFAND6Q6FIF0 208 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 SIGIRRQ6IA17 410 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 ZFP1Q6P2D0 407 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 CD200R1LQ6Q8B3 271 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 LYPD6Q86Y78 171 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 Q8N1Y9 231 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 JAGN1Q8N5M9 183 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 OR13C5Q8NGS8 318 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 FLYWCH2Q96CP2 140 aaKnown RBP10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 SLC29A1Q99808 456 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 SELENOIQ9C0D9 397 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 BANF2Q9H503 90 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 C19orf73Q9NVV2 129 aa10.07□□□□□ -0.8
TRAPPC3-201ENST00000373159 SAA2-SAA4A0A096LPE2 208 aa10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 TRBV5-7A0A0A0MS05 114 aa10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 WBP4O75554 376 aaKnown RBP10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 LALBAP00709 142 aa10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 MAS1P04201 325 aa10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 SAA2P0DJI9 122 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 IGHV4-30-4P0DP06 118 aa10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 MGMTP16455 207 aa10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 VEGFCP49767 419 aa10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 PITPNAQ00169 270 aa10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 SMN1Q16637 294 aaKnown RBP10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 AKIRIN2Q53H80 203 aa10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 YIF1BQ5BJH7 314 aa10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 PYHIN1Q6K0P9 492 aa10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 FAM71F2Q6NXP2 309 aa10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 C5orf24Q7Z6I8 188 aa10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 OR2AK2Q8NG84 335 aa10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 MRPL30Q8TCC3 161 aaKnown RBP10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 GALMQ96C23 342 aa10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 RHOVQ96L33 236 aa10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 Q96M66 194 aa10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 C9orf16Q9BUW7 83 aa10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 RNF150Q9ULK6 438 aa10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 TNCP24821 2201 aa10.06□□□□□ -0.8
TRAPPC3-201ENST00000373159 HYDINQ4G0P3 5121 aa10.05□□□□□ -0.8
TRAPPC3-201ENST00000373159 FCN1O00602 326 aa10.05□□□□□ -0.8
TRAPPC3-201ENST00000373159 RRHO14718 337 aa10.05□□□□□ -0.8
TRAPPC3-201ENST00000373159 PDCD6O75340 191 aa10.05□□□□□ -0.8
TRAPPC3-201ENST00000373159 CRTAPO75718 401 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC3-201ENST00000373159 CT45A6P0DMU7 189 aa10.05□□□□□ -0.8
TRAPPC3-201ENST00000373159 CT45A5P0DMU8 189 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms