RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 HIST1H1EP10412 219 aaKnown RBP9.92□□□□□ -0.82
PTPRF-203ENST00000372407 IER3P46695 156 aa9.92□□□□□ -0.82
PTPRF-203ENST00000372407 P2RY4P51582 365 aa9.92□□□□□ -0.82
PTPRF-203ENST00000372407 FOXL2P58012 376 aa9.92□□□□□ -0.82
PTPRF-203ENST00000372407 TMEM97Q5BJF2 176 aa9.92□□□□□ -0.82
PTPRF-203ENST00000372407 NSUN5P2Q63ZY6 315 aa9.92□□□□□ -0.82
PTPRF-203ENST00000372407 CRIPAKQ8N1N5 446 aa9.92□□□□□ -0.82
PTPRF-203ENST00000372407 LRRC75AQ8NAA5 344 aa9.92□□□□□ -0.82
PTPRF-203ENST00000372407 OR1L1Q8NH94 360 aa9.92□□□□□ -0.82
PTPRF-203ENST00000372407 HEXA-AS1Q9H8Q6 139 aa9.92□□□□□ -0.82
PTPRF-203ENST00000372407 NPVFQ9HCQ7 196 aa9.92□□□□□ -0.82
PTPRF-203ENST00000372407 KCNE5Q9UJ90 142 aa9.92□□□□□ -0.82
PTPRF-203ENST00000372407 PIKFYVEQ9Y2I7 2098 aa9.92□□□□□ -0.82
PTPRF-203ENST00000372407 SPTAN1Q13813 2472 aaKnown RBP9.92□□□□□ -0.82
PTPRF-203ENST00000372407 SRSF10O75494 262 aaKnown RBP9.92□□□□□ -0.82
PTPRF-203ENST00000372407 MELTFP08582 738 aa9.92□□□□□ -0.82
PTPRF-203ENST00000372407 FAM209AQ5JX71 171 aa9.92□□□□□ -0.82
PTPRF-203ENST00000372407 Q8WTZ3 238 aa9.92□□□□□ -0.82
PTPRF-203ENST00000372407 ZNF488Q96MN9 340 aa9.92□□□□□ -0.82
PTPRF-203ENST00000372407 MDC1Q14676 2089 aaKnown RBP9.91□□□□□ -0.82
PTPRF-203ENST00000372407 A0A1W2PRD5 423 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 A0A1W2PRF3 423 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 A0A1W2PRM7 423 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 B4E171 279 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 M0QZK8 103 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 GGCTO75223 188 aaKnown RBP9.91□□□□□ -0.82
PTPRF-203ENST00000372407 AGFG2O95081 481 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 CD1BP29016 333 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 TSPAN7P41732 249 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 RPL30P62888 115 aaKnown RBP9.91□□□□□ -0.82
PTPRF-203ENST00000372407 ZXDCQ2QGD7 858 aaPredicted RBP9.91□□□□□ -0.82
PTPRF-203ENST00000372407 LBHQ53QV2 105 aaPredicted RBP9.91□□□□□ -0.82
PTPRF-203ENST00000372407 SLC25A47Q6Q0C1 308 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 OR1L6Q8NGR2 347 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 RASL11BQ9BPW5 248 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 TMEM222Q9H0R3 208 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 ZNF71Q9NQZ8 489 aaPredicted RBP9.91□□□□□ -0.82
PTPRF-203ENST00000372407 CLN8Q9UBY8 286 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 IL19Q9UHD0 177 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 MGST3O14880 152 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 KCNAB3O43448 404 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 IL11P20809 199 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 IGSF11Q5DX21 431 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 C10orf113Q5VZT2 155 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 TMEM116Q8NCL8 245 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 CTHRC1Q96CG8 243 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 MARS2Q96GW9 593 aaKnown RBP9.91□□□□□ -0.82
PTPRF-203ENST00000372407 ABHD14BQ96IU4 210 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 LOXL4Q96JB6 756 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 OR2V2Q96R30 315 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 LRRC37A2A6NM11 1700 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 ROS1P08922 2347 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 H0Y980 276 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 C1QL1O75973 258 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 PRF1P14222 555 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 OR10J1P30954 320 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 FAM3BP58499 235 aaPredicted RBP9.91□□□□□ -0.82
PTPRF-203ENST00000372407 RPL31P62899 125 aaKnown RBP9.91□□□□□ -0.82
PTPRF-203ENST00000372407 C1orf174Q8IYL3 243 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 RND1Q92730 232 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 TXNDC17Q9BRA2 123 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 AURKAIP1Q9NWT8 199 aaPredicted RBP9.91□□□□□ -0.82
PTPRF-203ENST00000372407 CLEC5AQ9NY25 188 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 NAGKQ9UJ70 344 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 FAM90A10PA6NDY2 464 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 FAM90A18PA6NE21 464 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 FAM90A16PA6NEW6 464 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 FAM90A20PA6NIJ5 464 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 FAM90A8PA6NJQ4 464 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 FAM90A7PA6NKC0 464 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 FAM90A22PA8MWA6 464 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 FAM90A12PA8MX19 464 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 FAM90A5PA8MXJ8 464 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 FAM90A23PA8MXZ1 464 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 PATE3B3GLJ2 98 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 ISLRO14498 428 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 MPDU1O75352 247 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 HPRT1P00492 218 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 FAM90A15PP0C7V4 464 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 FAM90A13PP0C7W8 464 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 FAM90A14PP0C7W9 464 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 FAM90A24PP0C7X0 464 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 SMIM10L1P0DMW3 83 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 IFITM2Q01629 132 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 LYRM7Q5U5X0 104 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 PMS2CLQ68D20 193 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 SMIM10Q96HG1 83 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 FAM117AQ9C073 453 aa9.91□□□□□ -0.82
PTPRF-203ENST00000372407 PRDX2P32119 198 aa9.9□□□□□ -0.82
PTPRF-203ENST00000372407 CEBPEQ15744 281 aa9.9□□□□□ -0.82
PTPRF-203ENST00000372407 FDX2Q6P4F2 183 aa9.9□□□□□ -0.82
PTPRF-203ENST00000372407 LDLRAD3Q86YD5 345 aa9.9□□□□□ -0.82
PTPRF-203ENST00000372407 TMEM251Q8N6I4 163 aa9.9□□□□□ -0.82
PTPRF-203ENST00000372407 RHOVQ96L33 236 aa9.9□□□□□ -0.82
PTPRF-203ENST00000372407 TREM2Q9NZC2 230 aa9.9□□□□□ -0.82
PTPRF-203ENST00000372407 CORTO00230 105 aa9.9□□□□□ -0.82
PTPRF-203ENST00000372407 SLC22A18ASQ8N1D0 253 aa9.9□□□□□ -0.82
PTPRF-203ENST00000372407 UFC1Q9Y3C8 167 aa9.9□□□□□ -0.82
PTPRF-203ENST00000372407 WIPI2Q9Y4P8 454 aa9.9□□□□□ -0.82
PTPRF-203ENST00000372407 RAB29O14966 203 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms