RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 KLHDC7BQ96G42 594 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 PLPPR2Q96GM1 343 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 OR4C12Q96R67 309 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 RASL10BQ96S79 203 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 ATP5SQ99766 215 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 FAM103A1Q9BTL3 118 aaKnown RBP4.62□□□□□ -1.67
ATG4A-204ENST00000372246 MAP1LC3BQ9GZQ8 125 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 PARLQ9H300 379 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 CACNG5Q9UF02 275 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 V9GYS6 101 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 FREM1Q5H8C1 2179 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 A0A1B0GW64 132 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF732B4DXR9 585 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 B4E171 279 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 H7BYZ3 331 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 TNFSF11O14788 317 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 PAGE4O60829 102 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 DFFBO76075 338 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 MSR1P21757 451 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 TNFSF10P50591 281 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 RND2P52198 227 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 SLC35B1P78383 322 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 TFF3Q07654 80 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 OR5I1Q13606 314 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 BSXQ3C1V8 233 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.61□□□□□ -1.67
ATG4A-204ENST00000372246 TIPARPQ7Z3E1 657 aaKnown RBP4.61□□□□□ -1.67
ATG4A-204ENST00000372246 ATOH7Q8N100 152 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF611Q8N823 705 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 EXTL1Q92935 676 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 GAL3ST2Q9H3Q3 398 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 TPSG1Q9NRR2 321 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 FGF21Q9NSA1 209 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 FKBP11Q9NYL4 201 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 CD207Q9UJ71 328 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 RNF150Q9ULK6 438 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 GOLT1BQ9Y3E0 138 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 TRBV24-1A0A075B6N3 115 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 A0A096LPE4 126 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 A0A1W2PN81 502 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 A0A1W2PPZ6 126 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 SYNGR1O43759 233 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 PGLYRP1O75594 196 aaPredicted RBP4.61□□□□□ -1.67
ATG4A-204ENST00000372246 NAPSAO96009 420 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 HPRT1P00492 218 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 NRASP01111 189 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF32P17041 273 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 APOBEC3AP31941 199 aaPredicted RBP4.61□□□□□ -1.67
ATG4A-204ENST00000372246 ATP5G3P48201 142 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 GPM6AP51674 278 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 FOXG1P55316 489 aaPredicted RBP4.61□□□□□ -1.67
ATG4A-204ENST00000372246 HTD2P86397 168 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 ID3Q02535 119 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 RAET1LQ5VY80 246 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 Q6ZWC4 215 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.61□□□□□ -1.67
ATG4A-204ENST00000372246 LRTM2Q8N967 370 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 ST6GALNAC3Q8NDV1 305 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 MRPL30Q8TCC3 161 aaKnown RBP4.61□□□□□ -1.67
ATG4A-204ENST00000372246 VN1R17PQ8TDU5 208 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 ADGRG7Q96K78 797 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 SRXN1Q9BYN0 137 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 ACTR3CQ9C0K3 210 aaPredicted RBP4.61□□□□□ -1.67
ATG4A-204ENST00000372246 SRD5A3Q9H8P0 318 aa4.61□□□□□ -1.67
ATG4A-204ENST00000372246 GTF3C1Q12789 2109 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 LRP4O75096 1905 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 SVEP1Q4LDE5 3571 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 A0A0G2JMM0 328 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 A0A1W2PPB8 328 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 A0A1W2PRS3 328 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF320A2RRD8 509 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 KIR3DP1A8MWS1 328 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 M0R143 59 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 SLC17A3O00476 420 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 SH2D1BO14796 132 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 DLEU1O43261 78 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 PDCD6O75340 191 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 CDS2O95674 445 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 IGLV3-1P01715 115 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 GYPAP02724 150 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 IFI6P09912 130 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 TCN2P20062 427 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 CBLN1P23435 193 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 IL3RAP26951 378 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 MPLP40238 635 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 MDH2P40926 338 aaKnown RBP4.6□□□□□ -1.67
ATG4A-204ENST00000372246 GUCA1AP43080 201 aaPredicted RBP4.6□□□□□ -1.67
ATG4A-204ENST00000372246 TNFRSF4P43489 277 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 CDKN1BP46527 198 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 LINC00310P59036 64 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 YPEL5P62699 121 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 RBX1P62877 108 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 MALLQ13021 153 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 ARL6IP1Q15041 203 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 MMDQ15546 238 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 TMEM241Q24JQ0 296 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 KIAA1644Q3SXP7 199 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 DPPA3Q6W0C5 159 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 ANKRD37Q7Z713 158 aa4.6□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF525Q8N782 197 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms