RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 FOXB1Q99853 325 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 EDA2RQ9HAV5 297 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 ORM2P19652 201 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 CDKN2AP42771 156 aaKnown RBP12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 SPANXN1Q5VSR9 72 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 LDLRAD3Q86YD5 345 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 H1FOOQ8IZA3 346 aaPredicted RBP12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 OR1B1Q8NGR6 318 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 PTPMT1Q8WUK0 201 aaPredicted RBP12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 SLCO1C1Q9NYB5 712 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 OR11H12B2RN74 326 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 FGF9P31371 208 aaPredicted RBP12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 LYZP61626 148 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 TCF23Q7RTU1 214 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 MRGPREQ86SM8 312 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 ZDHHC23Q8IYP9 409 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 FADS6Q8N9I5 356 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 OR11H1Q8NG94 326 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 OR2K2Q8NGT1 345 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 OR11H2Q8NH07 326 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 MRAPQ8TCY5 172 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 PPP1R17O96001 155 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 BCL2P10415 239 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 DCAF10Q5QP82 559 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 ORAI1Q96D31 301 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 ZNF665Q9H7R5 613 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 LAMTOR2Q9Y2Q5 125 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 NPIPB6E9PJ23 425 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 CDX4O14627 284 aaPredicted RBP12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 CSRP2Q16527 193 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 ZNF770Q6IQ21 691 aaPredicted RBP12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 SLC23A3Q6PIS1 610 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 OR10D3Q8NH80 312 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 NPFFR1Q9GZQ6 430 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 RBM38Q9H0Z9 239 aaKnown RBP12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 FOCADQ5VW36 1801 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 HYAL3O43820 417 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 GCM2O75603 506 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 SSBP2P81877 361 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 CCL21O00585 134 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 MPZL1O95297 269 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 EML2O95834 649 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 CRYBB2P43320 205 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 KIRREL2Q6UWL6 708 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 C16orf47Q6ZP98 133 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 ZNF441Q8N8Z8 693 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 SIGLEC11Q96RL6 698 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 NEU1Q99519 415 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 TRPM7Q96QT4 1865 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 A0A1W2PR80 420 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 TNFRSF1AP19438 455 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 CKS2P33552 79 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 VN1R4Q7Z5H5 301 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 TRMT61AQ96FX7 289 aaKnown RBP12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 FUT3P21217 361 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 SPATA46Q5T0L3 261 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 DEGS2Q6QHC5 323 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 CYB561D1Q8N8Q1 229 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 TRIP11Q15643 1979 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 TMEM30CPA0ZSE6 113 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 TMEM50AO95807 157 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 FAM27D1Q5T7N8 215 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 OR1F12Q8NHA8 337 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 WNT5BQ9H1J7 359 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 SIRT5Q9NXA8 310 aa12.31□□□□□ -0.44
RAPGEF1-202ENST00000372190 HSPB1P04792 205 aaKnown RBP12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 HOXD4P09016 255 aaPredicted RBP12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 SLC22A18ASQ8N1D0 253 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 AICDAQ9GZX7 198 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 A0A087WUJ7 227 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 NKX2-2O95096 273 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 HPRT1P00492 218 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 MAS1LP35410 378 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 MAGEA5P43359 124 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 FUT6P51993 359 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 NAAAQ02083 359 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 MESP2Q0VG99 397 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 WDR31Q8NA23 367 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 WDR54Q9H977 334 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 CROCCQ5TZA2 2017 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 GHRHP01286 108 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 CD3EP07766 207 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 FAM71F2Q6NXP2 309 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 OR8B2Q96RD0 313 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 PCOLCE2Q9UKZ9 415 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 TDRD15B5MCY1 1934 aaKnown RBP12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 RBBP6Q7Z6E9 1792 aaKnown RBP12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 ALG1L2C9J202 215 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 RPS27P42677 84 aaKnown RBP12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 AMER3Q8N944 861 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 WDR13Q9H1Z4 485 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 ZNFX1Q9P2E3 1918 aaKnown RBP12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 MEX3AA1L020 520 aaKnown RBP12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 DNASE2O00115 360 aaPredicted RBP12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 OR11H7Q8NGC8 314 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 OR1K1Q8NGR3 316 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 SLC6A13Q9NSD5 602 aa12.3□□□□□ -0.44
RAPGEF1-202ENST00000372190 PPIHO43447 177 aaKnown RBP12.29□□□□□ -0.44
RAPGEF1-202ENST00000372190 TNFSF10P50591 281 aa12.29□□□□□ -0.44
RAPGEF1-202ENST00000372190 RAE1P78406 368 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms