RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 TMED6Q8WW62 240 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 SFXN3Q9BWM7 321 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 OPN3Q9H1Y3 402 aaPredicted RBP11.84□□□□□ -0.51
LDB3-204ENST00000372066 SEBOXQ9HB31 216 aaPredicted RBP11.84□□□□□ -0.51
LDB3-204ENST00000372066 LPAR3Q9UBY5 353 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 FBXL17Q9UF56 701 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 TRAPPC2LQ9UL33 140 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 SPEF1Q9Y4P9 236 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 NAV3Q8IVL0 2385 aa11.83□□□□□ -0.52
LDB3-204ENST00000372066 TMEM30CPA0ZSE6 113 aa11.83□□□□□ -0.52
LDB3-204ENST00000372066 IFNL4K9M1U5 179 aa11.83□□□□□ -0.52
LDB3-204ENST00000372066 SIRPB1O00241 398 aa11.83□□□□□ -0.52
LDB3-204ENST00000372066 GRPP07492 148 aa11.83□□□□□ -0.52
LDB3-204ENST00000372066 F2RP25116 425 aa11.83□□□□□ -0.52
LDB3-204ENST00000372066 BLOC1S1P78537 153 aa11.83□□□□□ -0.52
LDB3-204ENST00000372066 DEFB113Q30KQ7 82 aa11.83□□□□□ -0.52
LDB3-204ENST00000372066 ALKBH6Q3KRA9 238 aa11.83□□□□□ -0.52
LDB3-204ENST00000372066 SLC35E4Q6ICL7 350 aa11.83□□□□□ -0.52
LDB3-204ENST00000372066 PLPPR1Q8TBJ4 325 aa11.83□□□□□ -0.52
LDB3-204ENST00000372066 USB1Q9BQ65 265 aaKnown RBP11.83□□□□□ -0.52
LDB3-204ENST00000372066 ARV1Q9H2C2 271 aa11.83□□□□□ -0.52
LDB3-204ENST00000372066 NARFLQ9H6Q4 476 aa11.83□□□□□ -0.52
LDB3-204ENST00000372066 OR2S2Q9NQN1 319 aa11.83□□□□□ -0.52
LDB3-204ENST00000372066 CCL28Q9NRJ3 127 aa11.83□□□□□ -0.52
LDB3-204ENST00000372066 KCNIP1Q9NZI2 227 aa11.83□□□□□ -0.52
LDB3-204ENST00000372066 CHD3Q12873 2000 aaKnown RBP11.83□□□□□ -0.52
LDB3-204ENST00000372066 ACANP16112 2415 aa11.82□□□□□ -0.52
LDB3-204ENST00000372066 ZSCAN5BA6NJL1 495 aa11.82□□□□□ -0.52
LDB3-204ENST00000372066 H0YL77 283 aa11.82□□□□□ -0.52
LDB3-204ENST00000372066 PGLYRP1O75594 196 aaPredicted RBP11.82□□□□□ -0.52
LDB3-204ENST00000372066 RCC1P18754 421 aaPredicted RBP11.82□□□□□ -0.52
LDB3-204ENST00000372066 CD200P41217 278 aa11.82□□□□□ -0.52
LDB3-204ENST00000372066 NKX2-1P43699 371 aaPredicted RBP11.82□□□□□ -0.52
LDB3-204ENST00000372066 SULT1A2P50226 295 aa11.82□□□□□ -0.52
LDB3-204ENST00000372066 TMEM33P57088 247 aa11.82□□□□□ -0.52
LDB3-204ENST00000372066 PAX5Q02548 391 aa11.82□□□□□ -0.52
LDB3-204ENST00000372066 MSMO1Q15800 293 aa11.82□□□□□ -0.52
LDB3-204ENST00000372066 SMIM21Q3B7S5 101 aa11.82□□□□□ -0.52
LDB3-204ENST00000372066 NMSQ5H8A3 153 aa11.82□□□□□ -0.52
LDB3-204ENST00000372066 RPL7L1Q6DKI1 246 aaKnown RBP11.82□□□□□ -0.52
LDB3-204ENST00000372066 ACP7Q6ZNF0 438 aa11.82□□□□□ -0.52
LDB3-204ENST00000372066 OR52M1Q8NGK5 317 aa11.82□□□□□ -0.52
LDB3-204ENST00000372066 OR1S2Q8NGQ3 325 aa11.82□□□□□ -0.52
LDB3-204ENST00000372066 SMIM8Q96KF7 97 aa11.82□□□□□ -0.52
LDB3-204ENST00000372066 MMP26Q9NRE1 261 aa11.82□□□□□ -0.52
LDB3-204ENST00000372066 RCL1Q9Y2P8 373 aaKnown RBP11.82□□□□□ -0.52
LDB3-204ENST00000372066 ANKHD1Q8IWZ3 2542 aaKnown RBP11.82□□□□□ -0.52
LDB3-204ENST00000372066 MAP1AP78559 2803 aaPredicted RBP11.82□□□□□ -0.52
LDB3-204ENST00000372066 RNF212BA8MTL3 300 aa11.81□□□□□ -0.52
LDB3-204ENST00000372066 HSD17B6O14756 317 aa11.81□□□□□ -0.52
LDB3-204ENST00000372066 FAM157CP0CG43 387 aa11.81□□□□□ -0.52
LDB3-204ENST00000372066 TRAT1Q6PIZ9 186 aa11.81□□□□□ -0.52
LDB3-204ENST00000372066 FAM90A1Q86YD7 464 aa11.81□□□□□ -0.52
LDB3-204ENST00000372066 ZBTB34Q8NCN2 500 aa11.81□□□□□ -0.52
LDB3-204ENST00000372066 WFDC11Q8NEX6 87 aa11.81□□□□□ -0.52
LDB3-204ENST00000372066 OR10Z1Q8NGY1 313 aa11.81□□□□□ -0.52
LDB3-204ENST00000372066 C1QTNF6Q9BXI9 259 aa11.81□□□□□ -0.52
LDB3-204ENST00000372066 SLC25A31Q9H0C2 315 aa11.81□□□□□ -0.52
LDB3-204ENST00000372066 TOLLIPQ9H0E2 274 aa11.81□□□□□ -0.52
LDB3-204ENST00000372066 C11orf1Q9H5F2 150 aa11.81□□□□□ -0.52
LDB3-204ENST00000372066 PLEKHF2Q9H8W4 249 aa11.81□□□□□ -0.52
LDB3-204ENST00000372066 NIPBLQ6KC79 2804 aaeCLIP11.81□□□□□ -0.52
LDB3-204ENST00000372066 LOC105371267A0A1B0GV96 52 aa11.8□□□□□ -0.52
LDB3-204ENST00000372066 OOEPA6NGQ2 149 aa11.8□□□□□ -0.52
LDB3-204ENST00000372066 A6NLC8 198 aa11.8□□□□□ -0.52
LDB3-204ENST00000372066 PTBP3O95758 552 aaKnown RBP11.8□□□□□ -0.52
LDB3-204ENST00000372066 SEC11BP0C7V7 166 aa11.8□□□□□ -0.52
LDB3-204ENST00000372066 RPS23P62266 143 aaKnown RBP11.8□□□□□ -0.52
LDB3-204ENST00000372066 TAGLNQ01995 201 aaKnown RBP11.8□□□□□ -0.52
LDB3-204ENST00000372066 TUSC1Q2TAM9 212 aa11.8□□□□□ -0.52
LDB3-204ENST00000372066 WDR82Q6UXN9 313 aa11.8□□□□□ -0.52
LDB3-204ENST00000372066 C11orf53Q8IXP5 236 aa11.8□□□□□ -0.52
LDB3-204ENST00000372066 DMBX1Q8NFW5 382 aa11.8□□□□□ -0.52
LDB3-204ENST00000372066 FAM216AQ8WUB2 273 aa11.8□□□□□ -0.52
LDB3-204ENST00000372066 LIN7CQ9NUP9 197 aaKnown RBP11.8□□□□□ -0.52
LDB3-204ENST00000372066 JKAMPQ9P055 326 aa11.8□□□□□ -0.52
LDB3-204ENST00000372066 ZNF469Q96JG9 3925 aaPredicted RBP11.8□□□□□ -0.52
LDB3-204ENST00000372066 HEATR1Q9H583 2144 aaKnown RBP11.8□□□□□ -0.52
LDB3-204ENST00000372066 A0A1B0GU03 582 aa11.79□□□□□ -0.52
LDB3-204ENST00000372066 ZNF705EA8MWA4 302 aaPredicted RBP11.79□□□□□ -0.52
LDB3-204ENST00000372066 HSPA12AO43301 675 aa11.79□□□□□ -0.52
LDB3-204ENST00000372066 HEXAP06865 529 aa11.79□□□□□ -0.52
LDB3-204ENST00000372066 SERPINE2P07093 398 aa11.79□□□□□ -0.52
LDB3-204ENST00000372066 CFHR2P36980 270 aa11.79□□□□□ -0.52
LDB3-204ENST00000372066 Q6ZR03 302 aa11.79□□□□□ -0.52
LDB3-204ENST00000372066 LSM10Q969L4 123 aaKnown RBP11.79□□□□□ -0.52
LDB3-204ENST00000372066 MUCL1Q96DR8 90 aa11.79□□□□□ -0.52
LDB3-204ENST00000372066 GINS3Q9BRX5 216 aa11.79□□□□□ -0.52
LDB3-204ENST00000372066 PARP11Q9NR21 331 aa11.79□□□□□ -0.52
LDB3-204ENST00000372066 ADAM20O43506 726 aa11.79□□□□□ -0.52
LDB3-204ENST00000372066 CRYAAP02489 173 aa11.79□□□□□ -0.52
LDB3-204ENST00000372066 GLRXP35754 106 aa11.79□□□□□ -0.52
LDB3-204ENST00000372066 RAB5CP51148 216 aa11.79□□□□□ -0.52
LDB3-204ENST00000372066 FABP6P51161 128 aa11.79□□□□□ -0.52
LDB3-204ENST00000372066 VAMP2P63027 116 aa11.79□□□□□ -0.52
LDB3-204ENST00000372066 ID3Q02535 119 aa11.79□□□□□ -0.52
LDB3-204ENST00000372066 BAXQ07812 192 aa11.79□□□□□ -0.52
LDB3-204ENST00000372066 PJVKQ0ZLH3 352 aa11.79□□□□□ -0.52
LDB3-204ENST00000372066 Q71RC1 249 aaPredicted RBP11.79□□□□□ -0.52
LDB3-204ENST00000372066 OR2C3Q8N628 320 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms