RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 IGKV3-15P01624 115 aa10.87□□□□□ -0.67
GPC3-201ENST00000370818 IL24Q13007 206 aa10.87□□□□□ -0.67
GPC3-201ENST00000370818 ALKBH6Q3KRA9 238 aa10.87□□□□□ -0.67
GPC3-201ENST00000370818 Q6ZS92 163 aa10.87□□□□□ -0.67
GPC3-201ENST00000370818 WDR86Q86TI4 376 aa10.87□□□□□ -0.67
GPC3-201ENST00000370818 TOMM40LQ969M1 308 aa10.87□□□□□ -0.67
GPC3-201ENST00000370818 ERGIC1Q969X5 290 aa10.87□□□□□ -0.67
GPC3-201ENST00000370818 ACTR3CQ9C0K3 210 aaPredicted RBP10.87□□□□□ -0.67
GPC3-201ENST00000370818 PLSCR4Q9NRQ2 329 aa10.87□□□□□ -0.67
GPC3-201ENST00000370818 MGAQ8IWI9 3026 aa10.87□□□□□ -0.67
GPC3-201ENST00000370818 SHANK1Q9Y566 2161 aa10.87□□□□□ -0.67
GPC3-201ENST00000370818 KLK10O43240 276 aa10.87□□□□□ -0.67
GPC3-201ENST00000370818 ZNF728P0DKX0 622 aa10.87□□□□□ -0.67
GPC3-201ENST00000370818 PIGPP57054 158 aa10.87□□□□□ -0.67
GPC3-201ENST00000370818 FXYD4P59646 89 aa10.87□□□□□ -0.67
GPC3-201ENST00000370818 ASCL5Q7RTU5 278 aa10.87□□□□□ -0.67
GPC3-201ENST00000370818 C17orf78Q8N4C9 275 aa10.87□□□□□ -0.67
GPC3-201ENST00000370818 SLC25A40Q8TBP6 338 aa10.87□□□□□ -0.67
GPC3-201ENST00000370818 RNASEH2CQ8TDP1 164 aaKnown RBP10.87□□□□□ -0.67
GPC3-201ENST00000370818 BSCL2Q96G97 398 aaPredicted RBP10.87□□□□□ -0.67
GPC3-201ENST00000370818 PKIBQ9C010 78 aa10.87□□□□□ -0.67
GPC3-201ENST00000370818 GOLT1BQ9Y3E0 138 aa10.87□□□□□ -0.67
GPC3-201ENST00000370818 DCHS1Q96JQ0 3298 aa10.87□□□□□ -0.67
GPC3-201ENST00000370818 MED19A0JLT2 244 aaPredicted RBP10.86□□□□□ -0.67
GPC3-201ENST00000370818 HSPB6O14558 160 aa10.86□□□□□ -0.67
GPC3-201ENST00000370818 AGFG2O95081 481 aa10.86□□□□□ -0.67
GPC3-201ENST00000370818 CGAP01215 116 aa10.86□□□□□ -0.67
GPC3-201ENST00000370818 PPP1CCP36873 323 aaKnown RBP10.86□□□□□ -0.67
GPC3-201ENST00000370818 UBE2KP61086 200 aa10.86□□□□□ -0.67
GPC3-201ENST00000370818 Q6ZS49 121 aa10.86□□□□□ -0.67
GPC3-201ENST00000370818 SGPP2Q8IWX5 399 aa10.86□□□□□ -0.67
GPC3-201ENST00000370818 C1orf162Q8NEQ5 155 aaPredicted RBP10.86□□□□□ -0.67
GPC3-201ENST00000370818 MOB3AQ96BX8 217 aa10.86□□□□□ -0.67
GPC3-201ENST00000370818 STARD4Q96DR4 205 aa10.86□□□□□ -0.67
GPC3-201ENST00000370818 SMDT1Q9H4I9 107 aa10.86□□□□□ -0.67
GPC3-201ENST00000370818 Q9N2K0 584 aa10.86□□□□□ -0.67
GPC3-201ENST00000370818 A0A1B0GV50 99 aa10.86□□□□□ -0.67
GPC3-201ENST00000370818 HSD17B6O14756 317 aa10.86□□□□□ -0.67
GPC3-201ENST00000370818 DLK1P80370 383 aa10.86□□□□□ -0.67
GPC3-201ENST00000370818 PSG7Q13046 419 aa10.86□□□□□ -0.67
GPC3-201ENST00000370818 HNF4GQ14541 408 aa10.86□□□□□ -0.67
GPC3-201ENST00000370818 HAGHQ16775 308 aa10.86□□□□□ -0.67
GPC3-201ENST00000370818 C4orf17Q53FE4 359 aa10.86□□□□□ -0.67
GPC3-201ENST00000370818 TMEM208Q9BTX3 173 aa10.86□□□□□ -0.67
GPC3-201ENST00000370818 OPN3Q9H1Y3 402 aaPredicted RBP10.86□□□□□ -0.67
GPC3-201ENST00000370818 WFDC1Q9HC57 220 aa10.86□□□□□ -0.67
GPC3-201ENST00000370818 MEMO1Q9Y316 297 aa10.86□□□□□ -0.67
GPC3-201ENST00000370818 DLEU1O43261 78 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 WDR1O75083 606 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 PRH1P02810 166 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 RAC2P15153 192 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 AADACP22760 399 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 RBMXP38159 391 aaKnown RBP10.85□□□□□ -0.67
GPC3-201ENST00000370818 GLIPR1P48060 266 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 SRSF7Q16629 238 aaKnown RBP eCLIP10.85□□□□□ -0.672e-8■■■■■ 29.5
GPC3-201ENST00000370818 CXorf67Q86X51 503 aaPredicted RBP10.85□□□□□ -0.67
GPC3-201ENST00000370818 FAM58AQ8N1B3 248 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 RBMXL3Q8N7X1 1067 aaKnown RBP10.85□□□□□ -0.67
GPC3-201ENST00000370818 RCC1LQ96I51 464 aaKnown RBP10.85□□□□□ -0.67
GPC3-201ENST00000370818 GINS3Q9BRX5 216 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 PLK3Q9H4B4 646 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 C1orf123Q9NWV4 160 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 TRAV24A0A0B4J272 114 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 MBD3L4A6NDZ8 208 aaPredicted RBP10.85□□□□□ -0.67
GPC3-201ENST00000370818 MBD3L3A6NE82 208 aaPredicted RBP10.85□□□□□ -0.67
GPC3-201ENST00000370818 MBD3L5A6NJ08 208 aaPredicted RBP10.85□□□□□ -0.67
GPC3-201ENST00000370818 H0YL77 283 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 J3QT63 122 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 DEDDO75618 318 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 PGA5P0DJD9 388 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 MPV17P39210 176 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 UCP3P55916 312 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 ALKBH2Q6NS38 261 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 LINC00596Q86U02 117 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 MBD3L2Q8NHZ7 208 aaPredicted RBP10.85□□□□□ -0.67
GPC3-201ENST00000370818 DTD1Q8TEA8 209 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 RTN4IP1Q8WWV3 396 aaPredicted RBP10.85□□□□□ -0.67
GPC3-201ENST00000370818 RTL8AQ9BWD3 113 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 ZNF71Q9NQZ8 489 aaPredicted RBP10.85□□□□□ -0.67
GPC3-201ENST00000370818 SLC2A9Q9NRM0 540 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 PITPNC1Q9UKF7 332 aa10.85□□□□□ -0.67
GPC3-201ENST00000370818 STRAPQ9Y3F4 350 aaKnown RBP10.85□□□□□ -0.67
GPC3-201ENST00000370818 BSNQ9UPA5 3926 aa10.84□□□□□ -0.67
GPC3-201ENST00000370818 IQCF6A8MYZ5 107 aa10.84□□□□□ -0.67
GPC3-201ENST00000370818 CRYABP02511 175 aaKnown RBP10.84□□□□□ -0.67
GPC3-201ENST00000370818 AMBPP02760 352 aa10.84□□□□□ -0.67
GPC3-201ENST00000370818 SCTP09683 121 aa10.84□□□□□ -0.67
GPC3-201ENST00000370818 NPSP0C0P6 89 aa10.84□□□□□ -0.67
GPC3-201ENST00000370818 HOXC12P31275 282 aa10.84□□□□□ -0.67
GPC3-201ENST00000370818 TDGF1P3P51864 188 aa10.84□□□□□ -0.67
GPC3-201ENST00000370818 CCL20P78556 96 aa10.84□□□□□ -0.67
GPC3-201ENST00000370818 IL13RA2Q14627 380 aa10.84□□□□□ -0.67
GPC3-201ENST00000370818 HERPUD1Q15011 391 aa10.84□□□□□ -0.67
GPC3-201ENST00000370818 IAH1Q2TAA2 248 aaPredicted RBP10.84□□□□□ -0.67
GPC3-201ENST00000370818 PHLDA2Q53GA4 152 aa10.84□□□□□ -0.67
GPC3-201ENST00000370818 C20orf204Q6ZNR8 217 aa10.84□□□□□ -0.67
GPC3-201ENST00000370818 HSD17B11Q8NBQ5 300 aa10.84□□□□□ -0.67
GPC3-201ENST00000370818 KLF14Q8TD94 323 aaPredicted RBP10.84□□□□□ -0.67
GPC3-201ENST00000370818 FAM210BQ96KR6 192 aa10.84□□□□□ -0.67
GPC3-201ENST00000370818 NAA60Q9H7X0 242 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms