RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 FAM57AQ8TBR7 257 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 TMEM56Q96MV1 263 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 AQP10Q96PS8 301 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 NRIP2Q9BQI9 281 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 COL4A3Q01955 1670 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 SPTBN2O15020 2390 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 ZNF705FA8MVS1 300 aaPredicted RBP4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 IQCF6A8MYZ5 107 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 C10orf142B7Z368 130 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 AP4M1O00189 453 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 ADAM10O14672 748 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 DEDDO75618 318 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 CNIH1O95406 144 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 CECR9P0C854 216 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 ZNF705DP0CH99 300 aaPredicted RBP4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 ZNF705BP0CI00 300 aaPredicted RBP4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 SPINK2P20155 84 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 FGF7P21781 194 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 SULT1A1P50225 295 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 PRRX1P54821 245 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 ANKRD55Q3KP44 614 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 LCN15Q6UWW0 184 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 OR10D4PQ8NGN7 298 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 VSTM2AQ8TAG5 236 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 HPSE2Q8WWQ2 592 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 SPSB4Q96A44 273 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 R3HDM4Q96D70 268 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 GALNT14Q96FL9 552 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 TMEM68Q96MH6 324 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 ATP5SQ99766 215 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 SPOCK3Q9BQ16 436 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 TMEM147Q9BVK8 224 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 ZDHHC11Q9H8X9 412 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 SH2D2AQ9NP31 389 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 KIAA1456Q9P272 454 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 GNG13Q9P2W3 67 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 SPRR3Q9UBC9 169 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 ALPK3Q96L96 1907 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 C7orf77A4D0Y5 90 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 CCL21O00585 134 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 EIF3GO75821 320 aaKnown RBP eCLIP4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 HBZP02008 142 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 CT45A6P0DMU7 189 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 CT45A5P0DMU8 189 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 CT45A7P0DMV0 189 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 MUC1P15941 1255 aaPredicted RBP4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 CHRNB4P30926 498 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 MPV17P39210 176 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 EWSR1Q01844 656 aaKnown RBP eCLIP4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 HES1Q14469 280 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 TESK1Q15569 626 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 C4orf17Q53FE4 359 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 CT45A1Q5HYN5 189 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 SLC35E4Q6ICL7 350 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 DHRS11Q6UWP2 260 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 C9orf106Q8NAJ2 232 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 CT45A3Q8NHU0 189 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 MRGPRFQ96AM1 343 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 ZNF524Q96C55 264 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 PROK2Q9HC23 129 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 AMMECR1Q9Y4X0 333 aaPredicted RBP4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 PCNX2A6NKB5 2137 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 PPIAL4EA0A075B759 164 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 TRAV39A0A0B4J263 110 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 UBE2L5PA0A1B0GUS4 154 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 PPIAL4DF5H284 164 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 PPIAL4FP0DN26 164 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 PSG2P11465 335 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 HLA-GP17693 338 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 ZNF154Q13106 437 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 POC1AQ8NBT0 407 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 ITLN1Q8WWA0 313 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 PLPPR2Q96GM1 343 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 REG4Q9BYZ8 158 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 TREM2Q9NZC2 230 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 PPIAL4AQ9Y536 164 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 TTC28Q96AY4 2481 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 MED19A0JLT2 244 aaPredicted RBP4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 PGLYRP1O75594 196 aaPredicted RBP4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 IGHG3P01860 377 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 METTL15P1P0C7V9 234 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 DEFA4P12838 97 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 GNG10P50151 68 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 RND3P61587 244 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 TMEM267Q0VDI3 215 aaPredicted RBP4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 BATFQ16520 125 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 ZNF826PQ6ZT77 177 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 FAM90A1Q86YD7 464 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 EIF4E3Q8N5X7 224 aaKnown RBP4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 ZNF645Q8N7E2 425 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 PARP11Q9NR21 331 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 MTCH1Q9NZJ7 389 aa4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 PHF3Q92576 2039 aaKnown RBP4.54□□□□□ -1.68
SMNDC1-202ENST00000369603 IGHV2OR16-5A0A0B4J2B6 119 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 ODAMA1E959 279 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 FAM90A26D6RGX4 464 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 NDUFA2O43678 99 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 ZNF735P0CB33 412 aa4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 RCC1P18754 421 aaPredicted RBP4.53□□□□□ -1.68
SMNDC1-202ENST00000369603 RAB5AP20339 215 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms