RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ZNF727A8MUV8 499 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 NPIPB4C9JG80 1138 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 IGLV1-44P01699 117 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 OR13C7P0DN81 318 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 ADRA2CP18825 462 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 PRSS3P35030 304 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 IL24Q13007 206 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 PMS2P11Q13670 270 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 SPSB3Q6PJ21 355 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 ZNF417Q8TAU3 575 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 THRSPQ92748 146 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 SEC22AQ96IW7 307 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 HIST1H2AAQ96QV6 131 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 FRAS1Q86XX4 4008 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 VAMP5O95183 116 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 COMPP49747 757 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-204ENST00000369530 ZNF41P51814 821 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-204ENST00000369530 FAM3BP58499 235 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-204ENST00000369530 TMEM183BQ1AE95 376 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 STAC2Q6ZMT1 411 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 OR2T27Q8NH04 317 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 ACACAQ13085 2346 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 TMED7-TICAM2A0A0A6YYA0 188 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 SMAD9O15198 467 aaKnown RBP5.84□□□□□ -1.47
CSDE1-204ENST00000369530 ALDH3B1P43353 468 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 ZNF92Q03936 586 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 PET117Q6UWS5 81 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 TMEM123Q8N131 208 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 AGMATQ9BSE5 352 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 CENPMQ9NSP4 180 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 ZNF701Q9NV72 531 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-204ENST00000369530 TMED7Q9Y3B3 224 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 SVILO95425 2214 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 CACNA1BQ00975 2339 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 TRAV1-1A0A0B4J248 108 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 RBFOX3A6NFN3 312 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 OR5B21A6NL26 309 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 GEMIN2O14893 280 aaKnown RBP5.84□□□□□ -1.47
CSDE1-204ENST00000369530 APOBEC1P41238 236 aaKnown RBP5.84□□□□□ -1.47
CSDE1-204ENST00000369530 P2RY1P47900 373 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 UBE2KP61086 200 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 RPL18Q07020 188 aaKnown RBP5.84□□□□□ -1.47
CSDE1-204ENST00000369530 ATXN7L3Q14CW9 347 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-204ENST00000369530 CARD17Q5XLA6 110 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 ZNF705AQ6ZN79 300 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-204ENST00000369530 SYT9Q86SS6 491 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 SLC35F2Q8IXU6 374 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 ZNF676Q8N7Q3 588 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 CD300LFQ8TDQ1 290 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 ABHD3Q8WU67 409 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 TOMM40LQ969M1 308 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 C2orf50Q96LR7 162 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 ALG12Q9BV10 488 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 POLEQ07864 2286 aa5.84□□□□□ -1.47
CSDE1-204ENST00000369530 C22orf46C9J442 243 aa5.84□□□□□ -1.48
CSDE1-204ENST00000369530 NPIPA5E9PKD4 350 aa5.84□□□□□ -1.48
CSDE1-204ENST00000369530 KLRC4-KLRK1H3BQV0 150 aa5.84□□□□□ -1.48
CSDE1-204ENST00000369530 K7ERU9 68 aa5.84□□□□□ -1.48
CSDE1-204ENST00000369530 SLC16A7O60669 478 aa5.84□□□□□ -1.48
CSDE1-204ENST00000369530 OR5G3P0C626 314 aa5.84□□□□□ -1.48
CSDE1-204ENST00000369530 PTHLHP12272 177 aa5.84□□□□□ -1.48
CSDE1-204ENST00000369530 FUT3P21217 361 aa5.84□□□□□ -1.48
CSDE1-204ENST00000369530 ICAM4Q14773 271 aa5.84□□□□□ -1.48
CSDE1-204ENST00000369530 DPPA3Q6W0C5 159 aa5.84□□□□□ -1.48
CSDE1-204ENST00000369530 DPY19L4Q7Z388 723 aa5.84□□□□□ -1.48
CSDE1-204ENST00000369530 PDCD1LG2Q9BQ51 273 aa5.84□□□□□ -1.48
CSDE1-204ENST00000369530 ABHD14AQ9BUJ0 271 aa5.84□□□□□ -1.48
CSDE1-204ENST00000369530 NMNAT2Q9BZQ4 307 aa5.84□□□□□ -1.48
CSDE1-204ENST00000369530 OR6C3Q9NZP0 311 aa5.84□□□□□ -1.48
CSDE1-204ENST00000369530 ZNF581Q9P0T4 197 aa5.84□□□□□ -1.48
CSDE1-204ENST00000369530 NPIPA1Q9UND3 350 aa5.84□□□□□ -1.48
CSDE1-204ENST00000369530 CSMD3Q7Z407 3707 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 ABCA12Q86UK0 2595 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 VWC2LB2RUY7 222 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 J3KRW8 73 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 CLDN14O95500 239 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 GLRA1P23415 457 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 FPR2P25090 351 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 HLA-DRB3P79483 266 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 FAM189A2Q15884 450 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 ZNF429Q86V71 674 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 HOGA1Q86XE5 327 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 PNKDQ8N490 385 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 OR4B1Q8NGF8 309 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 SLC6A7Q99884 636 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 RNF24Q9Y225 148 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 ZNF503-AS2A6NEH8 195 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 SERPINE3A8MV23 424 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 ZNF823P16415 610 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 HOXB4P17483 251 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-204ENST00000369530 GUCA1AP43080 201 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-204ENST00000369530 POU3F1Q03052 451 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-204ENST00000369530 ZNF74Q16587 644 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 LRRC37A5PQ49AS3 106 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 RAET1LQ5VY80 246 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 ZNF787Q6DD87 383 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 HIST2H2BCQ6DN03 193 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 MRGPRGQ86SM5 289 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 MCHR2Q969V1 340 aa5.83□□□□□ -1.48
CSDE1-204ENST00000369530 ZNF479Q96JC4 524 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms