RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 FAM74A7A6NL05 159 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 OR2A4O95047 310 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 IGHV4-34P06331 123 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 BTF3P20290 206 aaKnown RBP13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 OR2A7Q96R45 310 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 PRO1933Q9H354 126 aa13.64□□□□□ -0.23
NUCKS1-201ENST00000367142 MPDU1O75352 247 aa13.63□□□□□ -0.23
NUCKS1-201ENST00000367142 AWAT1Q58HT5 328 aa13.63□□□□□ -0.23
NUCKS1-201ENST00000367142 LYZL2Q7Z4W2 148 aa13.63□□□□□ -0.23
NUCKS1-201ENST00000367142 TMEM229AB2RXF0 380 aa13.63□□□□□ -0.23
NUCKS1-201ENST00000367142 PITX3O75364 302 aa13.63□□□□□ -0.23
NUCKS1-201ENST00000367142 SUCLG1P53597 346 aaKnown RBP13.63□□□□□ -0.23
NUCKS1-201ENST00000367142 LBHQ53QV2 105 aaPredicted RBP13.63□□□□□ -0.23
NUCKS1-201ENST00000367142 A0A0J9YW62 118 aa13.63□□□□□ -0.23
NUCKS1-201ENST00000367142 RNASE1P07998 156 aaKnown RBP13.63□□□□□ -0.23
NUCKS1-201ENST00000367142 SELENOTP62341 195 aa13.63□□□□□ -0.23
NUCKS1-201ENST00000367142 NEURL2Q9BR09 285 aa13.63□□□□□ -0.23
NUCKS1-201ENST00000367142 ZNF645Q8N7E2 425 aa13.63□□□□□ -0.23
NUCKS1-201ENST00000367142 SIRT7Q9NRC8 400 aa13.63□□□□□ -0.23
NUCKS1-201ENST00000367142 SP9P0CG40 484 aa13.63□□□□□ -0.23
NUCKS1-201ENST00000367142 MPV17P39210 176 aa13.63□□□□□ -0.23
NUCKS1-201ENST00000367142 RPL8P62917 257 aaKnown RBP13.63□□□□□ -0.23
NUCKS1-201ENST00000367142 PSG4Q00888 419 aa13.63□□□□□ -0.23
NUCKS1-201ENST00000367142 HOGA1Q86XE5 327 aa13.63□□□□□ -0.23
NUCKS1-201ENST00000367142 SFXN3Q9BWM7 321 aa13.63□□□□□ -0.23
NUCKS1-201ENST00000367142 MYO18AQ92614 2054 aaKnown RBP13.63□□□□□ -0.23
NUCKS1-201ENST00000367142 IGKV3D-11A0A0A0MRZ8 115 aa13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 TMEM218A2RU14 115 aa13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 IGKV3-11P04433 115 aa13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 HOXB1P14653 301 aaPredicted RBP13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 OR10J1P30954 320 aa13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 DDX60LQ5H9U9 1706 aaKnown RBP13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 HSPB7Q9UBY9 170 aa13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 FOXH1O75593 365 aa13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 CD74P04233 296 aa13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 VSIG8P0DPA2 414 aa13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 RELQ04864 619 aaPredicted RBP13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 ELOVL1Q9BW60 279 aa13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 CGB1A6NKQ9 187 aa13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 SLC25A53Q5H9E4 307 aa13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 FAM216AQ8WUB2 273 aa13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 EEF1AKMT3Q96AZ1 226 aa13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 PHLDA3Q9Y5J5 127 aa13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 NHSQ6T4R5 1651 aa13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 COMPP49747 757 aaPredicted RBP13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 GALNT14Q96FL9 552 aa13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 SDK1Q7Z5N4 2213 aa13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 PRR19A6NJB7 356 aa13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 FOXS1O43638 330 aa13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 FUT9Q9Y231 359 aa13.62□□□□□ -0.23
NUCKS1-201ENST00000367142 A0A1W2PPV9 198 aa13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 OR4C45A6NMZ5 311 aa13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 RPS20P60866 119 aaKnown RBP13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 SNRPD3P62318 126 aaKnown RBP13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 FAM219BQ5XKK7 198 aa13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 TP53RKQ96S44 253 aa13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 PXMP4Q9Y6I8 212 aa13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 A0A1W2PQF6 199 aa13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 MMP16P51512 607 aa13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 TPRX1Q8N7U7 411 aa13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 THY1P04216 161 aa13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 NGFRP08138 427 aa13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 XAF1Q6GPH4 301 aa13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 FOXD3Q9UJU5 478 aaPredicted RBP13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 A8MWL6 223 aa13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 HOXA6P31267 233 aa13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 NMUP48645 174 aa13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 FGF12P61328 243 aa13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 MGAT2Q10469 447 aa13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 CIRBPQ14011 172 aaKnown RBP13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 HCP5Q6MZN7 132 aa13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 OR2H2O95918 312 aa13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 CCL27Q9Y4X3 112 aa13.61□□□□□ -0.23
NUCKS1-201ENST00000367142 A0A0U1RQV5 110 aa13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 SP7Q8TDD2 431 aaPredicted RBP13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 ELOVL5Q9NYP7 299 aa13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 ALS2Q96Q42 1657 aa13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 ANKRD12Q6UB98 2062 aa13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 FGF5P12034 268 aa13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 CX3CL1P78423 397 aa13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 ADAT3Q96EY9 351 aaPredicted RBP13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 ABHD1Q96SE0 405 aa13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 ZNF430Q9H8G1 570 aaPredicted RBP13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 RAXQ9Y2V3 346 aa13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 FCGR3AP08637 254 aa13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 LINC00869P0C866 280 aa13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 ADAD2Q8NCV1 583 aaKnown RBP13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 CACNA1SQ13698 1873 aa13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 C17orf51A8MQB3 221 aa13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 CYB5R3P00387 301 aaPredicted RBP13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 NAT2P11245 290 aa13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 ZNF880Q6PDB4 577 aa13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 OVCH2Q7RTZ1 564 aa13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 ZAR1Q86SH2 424 aa13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 OR8G5Q8NG78 346 aa13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 NRTNQ99748 197 aa13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 PDE4DIPQ5VU43 2346 aa13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 LAMB1P07942 1786 aa13.6□□□□□ -0.23
NUCKS1-201ENST00000367142 CFDP00746 253 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms