RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 KIR2DS1A0A191URI9 304 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 PINLYPA6NC86 204 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 OPN1MWP04001 364 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 OPN1MW2P0DN77 364 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 OPN1MW3P0DN78 364 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 VDAC1P21796 283 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 KIR2DS4P43632 304 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 KIR2DS1Q14954 304 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 NMSQ5H8A3 153 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 TBC1D26Q86UD7 250 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 TGIF2LXQ8IUE1 241 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 ZNF664Q8N3J9 261 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 TMEM217Q8N7C4 229 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 BEND2Q8NDZ0 799 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 RIMS4Q9H426 269 aaPredicted RBP12.53□□□□□ -0.4
PRKN-204ENST00000366896 SDF2L1Q9HCN8 221 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 UBE2J1Q9Y385 318 aaPredicted RBP12.53□□□□□ -0.4
PRKN-204ENST00000366896 ZFHX4Q86UP3 3567 aa12.52□□□□□ -0.4
PRKN-204ENST00000366896 AMBPP02760 352 aa12.52□□□□□ -0.4
PRKN-204ENST00000366896 WNT2P09544 360 aa12.52□□□□□ -0.4
PRKN-204ENST00000366896 BCL3P20749 454 aa12.52□□□□□ -0.4
PRKN-204ENST00000366896 GFRA1P56159 465 aa12.52□□□□□ -0.4
PRKN-204ENST00000366896 OR8G1Q15617 311 aa12.52□□□□□ -0.4
PRKN-204ENST00000366896 SPACA3Q8IXA5 215 aa12.52□□□□□ -0.4
PRKN-204ENST00000366896 H1FOOQ8IZA3 346 aaPredicted RBP12.52□□□□□ -0.4
PRKN-204ENST00000366896 OR4X1Q8NH49 305 aa12.52□□□□□ -0.4
PRKN-204ENST00000366896 SIGLEC12Q96PQ1 595 aa12.52□□□□□ -0.4
PRKN-204ENST00000366896 ATP5SQ99766 215 aa12.52□□□□□ -0.4
PRKN-204ENST00000366896 CABLES2Q9BTV7 478 aa12.52□□□□□ -0.4
PRKN-204ENST00000366896 GNG13Q9P2W3 67 aa12.52□□□□□ -0.4
PRKN-204ENST00000366896 IL36RNQ9UBH0 155 aa12.52□□□□□ -0.4
PRKN-204ENST00000366896 TRBV6-6A0A0A6YYG2 114 aa12.52□□□□□ -0.41
PRKN-204ENST00000366896 TCAPO15273 167 aa12.52□□□□□ -0.41
PRKN-204ENST00000366896 ADAM20O43506 726 aa12.52□□□□□ -0.41
PRKN-204ENST00000366896 RNPS1Q15287 305 aaKnown RBP12.52□□□□□ -0.41
PRKN-204ENST00000366896 DEFB109BQ30KR1 87 aa12.52□□□□□ -0.41
PRKN-204ENST00000366896 C9orf135Q5VTT2 229 aa12.52□□□□□ -0.41
PRKN-204ENST00000366896 LINC00596Q86U02 117 aa12.52□□□□□ -0.41
PRKN-204ENST00000366896 SNRPCP09234 159 aaKnown RBP12.51□□□□□ -0.41
PRKN-204ENST00000366896 BCL2P10415 239 aa12.51□□□□□ -0.41
PRKN-204ENST00000366896 IL24Q13007 206 aa12.51□□□□□ -0.41
PRKN-204ENST00000366896 ZNF154Q13106 437 aa12.51□□□□□ -0.41
PRKN-204ENST00000366896 ABHD17BQ5VST6 288 aa12.51□□□□□ -0.41
PRKN-204ENST00000366896 OR10A7Q8NGE5 316 aa12.51□□□□□ -0.41
PRKN-204ENST00000366896 OR56B2PQ8NGI1 322 aa12.51□□□□□ -0.41
PRKN-204ENST00000366896 OR5D13Q8NGL4 314 aa12.51□□□□□ -0.41
PRKN-204ENST00000366896 CTDSP1Q9GZU7 261 aa12.51□□□□□ -0.41
PRKN-204ENST00000366896 SLC33A1O00400 549 aaPredicted RBP12.51□□□□□ -0.41
PRKN-204ENST00000366896 HSPB6O14558 160 aa12.51□□□□□ -0.41
PRKN-204ENST00000366896 SCTP09683 121 aa12.51□□□□□ -0.41
PRKN-204ENST00000366896 SLC25A6P12236 298 aa12.51□□□□□ -0.41
PRKN-204ENST00000366896 CCL2P13500 99 aa12.51□□□□□ -0.41
PRKN-204ENST00000366896 USF2Q15853 346 aaPredicted RBP12.51□□□□□ -0.41
PRKN-204ENST00000366896 CEACAM21Q3KPI0 293 aa12.51□□□□□ -0.41
PRKN-204ENST00000366896 SPIN3Q5JUX0 258 aa12.51□□□□□ -0.41
PRKN-204ENST00000366896 ZNF818PQ6ZRF7 136 aa12.51□□□□□ -0.41
PRKN-204ENST00000366896 PLPPR1Q8TBJ4 325 aa12.51□□□□□ -0.41
PRKN-204ENST00000366896 PLK3Q9H4B4 646 aa12.51□□□□□ -0.41
PRKN-204ENST00000366896 SRD5A3Q9H8P0 318 aa12.51□□□□□ -0.41
PRKN-204ENST00000366896 ATP23Q9Y6H3 246 aa12.51□□□□□ -0.41
PRKN-204ENST00000366896 IGKV1D-13A0A0B4J2D9 117 aa12.5□□□□□ -0.41
PRKN-204ENST00000366896 SLC22A20A6NK97 555 aa12.5□□□□□ -0.41
PRKN-204ENST00000366896 H0Y980 276 aa12.5□□□□□ -0.41
PRKN-204ENST00000366896 SS18L1O75177 396 aaPredicted RBP12.5□□□□□ -0.41
PRKN-204ENST00000366896 NXPH3O95157 252 aa12.5□□□□□ -0.41
PRKN-204ENST00000366896 IGKV1-13P0DP09 117 aa12.5□□□□□ -0.41
PRKN-204ENST00000366896 CCNOP22674 350 aa12.5□□□□□ -0.41
PRKN-204ENST00000366896 GDF1P27539 372 aa12.5□□□□□ -0.41
PRKN-204ENST00000366896 NUTF2P61970 127 aaKnown RBP12.5□□□□□ -0.41
PRKN-204ENST00000366896 HERPUD1Q15011 391 aa12.5□□□□□ -0.41
PRKN-204ENST00000366896 COA6Q5JTJ3 125 aaKnown RBP12.5□□□□□ -0.41
PRKN-204ENST00000366896 ZNF880Q6PDB4 577 aa12.5□□□□□ -0.41
PRKN-204ENST00000366896 OR1P1Q8NH06 330 aa12.5□□□□□ -0.41
PRKN-204ENST00000366896 CA5BP1Q8WTZ4 195 aa12.5□□□□□ -0.41
PRKN-204ENST00000366896 MRPL37Q9BZE1 423 aaKnown RBP12.5□□□□□ -0.41
PRKN-204ENST00000366896 ACACAQ13085 2346 aa12.5□□□□□ -0.41
PRKN-204ENST00000366896 CACNA1AO00555 2505 aa12.5□□□□□ -0.41
PRKN-204ENST00000366896 A0A096LPE4 126 aa12.5□□□□□ -0.41
PRKN-204ENST00000366896 A0A1W2PPZ6 126 aa12.5□□□□□ -0.41
PRKN-204ENST00000366896 MDKP21741 143 aaPredicted RBP12.5□□□□□ -0.41
PRKN-204ENST00000366896 CCL11P51671 97 aa12.5□□□□□ -0.41
PRKN-204ENST00000366896 LINC00696Q6ZRV3 163 aa12.5□□□□□ -0.41
PRKN-204ENST00000366896 MKXQ8IYA7 352 aa12.5□□□□□ -0.41
PRKN-204ENST00000366896 GAPTQ8N292 157 aa12.5□□□□□ -0.41
PRKN-204ENST00000366896 ZNF552Q9H707 407 aaPredicted RBP12.5□□□□□ -0.41
PRKN-204ENST00000366896 ABI3Q9P2A4 366 aa12.5□□□□□ -0.41
PRKN-204ENST00000366896 ZFP92A6NM28 416 aa12.49□□□□□ -0.41
PRKN-204ENST00000366896 CHST1O43916 411 aa12.49□□□□□ -0.41
PRKN-204ENST00000366896 IL18BPO95998 194 aa12.49□□□□□ -0.41
PRKN-204ENST00000366896 CYB561P49447 251 aa12.49□□□□□ -0.41
PRKN-204ENST00000366896 GPM6AP51674 278 aa12.49□□□□□ -0.41
PRKN-204ENST00000366896 PAX9P55771 341 aa12.49□□□□□ -0.41
PRKN-204ENST00000366896 COL10A1Q03692 680 aa12.49□□□□□ -0.41
PRKN-204ENST00000366896 PRDX4Q13162 271 aa12.49□□□□□ -0.41
PRKN-204ENST00000366896 THNSL2Q86YJ6 484 aa12.49□□□□□ -0.41
PRKN-204ENST00000366896 P2RX4Q99571 388 aa12.49□□□□□ -0.41
PRKN-204ENST00000366896 ZNF665Q9H7R5 613 aa12.49□□□□□ -0.41
PRKN-204ENST00000366896 DFFBO76075 338 aa12.49□□□□□ -0.41
PRKN-204ENST00000366896 GCGP01275 180 aa12.49□□□□□ -0.41
PRKN-204ENST00000366896 ZDHHC23Q8IYP9 409 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms