RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 OR5D13Q8NGL4 314 aa8.96□□□□□ -0.97
SMC3-201ENST00000361804 GNPNAT1Q96EK6 184 aaPredicted RBP8.96□□□□□ -0.97
SMC3-201ENST00000361804 THOC3Q96J01 351 aaKnown RBP8.96□□□□□ -0.97
SMC3-201ENST00000361804 OR4C12Q96R67 309 aa8.96□□□□□ -0.97
SMC3-201ENST00000361804 SLC25A22Q9H936 323 aa8.96□□□□□ -0.97
SMC3-201ENST00000361804 OR2W1Q9Y3N9 320 aa8.96□□□□□ -0.97
SMC3-201ENST00000361804 IFNA5P01569 189 aa8.96□□□□□ -0.98
SMC3-201ENST00000361804 RNF224P0DH78 156 aa8.96□□□□□ -0.98
SMC3-201ENST00000361804 MAS1LP35410 378 aa8.96□□□□□ -0.98
SMC3-201ENST00000361804 CYB561P49447 251 aa8.96□□□□□ -0.98
SMC3-201ENST00000361804 SRPXP78539 464 aa8.96□□□□□ -0.98
SMC3-201ENST00000361804 CLN3Q13286 438 aa8.96□□□□□ -0.98
SMC3-201ENST00000361804 LILRB2Q8N423 598 aa8.96□□□□□ -0.98
SMC3-201ENST00000361804 MEGF10Q96KG7 1140 aa8.96□□□□□ -0.98
SMC3-201ENST00000361804 PRDM14Q9GZV8 571 aa8.96□□□□□ -0.98
SMC3-201ENST00000361804 ZNF585BQ52M93 769 aa8.96□□□□□ -0.98
SMC3-201ENST00000361804 ZNF525Q8N782 197 aa8.96□□□□□ -0.98
SMC3-201ENST00000361804 CA5BP1Q8WTZ4 195 aa8.96□□□□□ -0.98
SMC3-201ENST00000361804 OR5P3Q8WZ94 311 aa8.96□□□□□ -0.98
SMC3-201ENST00000361804 CSMD2Q7Z408 3487 aa8.96□□□□□ -0.98
SMC3-201ENST00000361804 PPP1R2P9O14990 202 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 SOX15O60248 233 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 BCL2P10415 239 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 WDR86Q86TI4 376 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 FAM185AQ8N0U4 392 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 TPRX1Q8N7U7 411 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 CT55Q8WUE5 264 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 KCNE4Q8WWG9 221 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 GAB2Q9UQC2 676 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 SYNGR2O43760 224 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 MT-CO3P00414 261 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 PMP22Q01453 160 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 ZNF816Q0VGE8 651 aaPredicted RBP8.95□□□□□ -0.98
SMC3-201ENST00000361804 IL24Q13007 206 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 BTNL3Q6UXE8 466 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 A0A1B0GV90 55 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 KRASP01116 189 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 RIPPLY2Q5TAB7 128 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 FAM58AQ8N1B3 248 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 SCGB1C1Q8TD33 95 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 CLN8Q9UBY8 286 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 CADP27708 2225 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 KIR2DS1A0A191URI9 304 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 KIR2DS4P43632 304 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 KIR2DS1Q14954 304 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 RPP25LQ8N5L8 163 aaKnown RBP8.95□□□□□ -0.98
SMC3-201ENST00000361804 OR10V1Q8NGI7 309 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 ZDHHC16Q969W1 377 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 HIST1H2AAQ96QV6 131 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 DMRT1Q9Y5R6 373 aa8.95□□□□□ -0.98
SMC3-201ENST00000361804 CELSR1Q9NYQ6 3014 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 CLEC18AA5D8T8 446 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 GZMHP20718 246 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 G6PCP35575 357 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 LHX2P50458 406 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 BAXQ07812 192 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 P2RY6Q15077 328 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 H1FOOQ8IZA3 346 aaPredicted RBP8.94□□□□□ -0.98
SMC3-201ENST00000361804 CLEC18CQ8NCF0 446 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 CABLES2Q9BTV7 478 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 HRNRQ86YZ3 2850 aaPredicted RBP8.94□□□□□ -0.98
SMC3-201ENST00000361804 A0A1B0GU03 582 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 MAP1LC3B2A6NCE7 125 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 SEC14L6B5MCN3 397 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 DEGS1O15121 323 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 CLDN1O95832 211 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 IGHV3-13P01766 116 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 IGHV3-7P01780 117 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 LURAP1LQ8IV03 231 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 WDYHV1Q96HA8 205 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 POM121L2Q96KW2 1035 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 MAP1LC3BQ9GZQ8 125 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 TRAPPC2LQ9UL33 140 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 CDIPTO14735 213 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 NEURL1O76050 574 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 CEACAM6P40199 344 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 CLDN18P56856 261 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 ACSM6Q6P461 480 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 ZNF600Q6ZNG1 722 aa8.94□□□□□ -0.98
SMC3-201ENST00000361804 UNKLQ9H9P5 680 aaKnown RBP8.94□□□□□ -0.98
SMC3-201ENST00000361804 CACNA1GO43497 2377 aa8.93□□□□□ -0.98
SMC3-201ENST00000361804 A0A087WWC5 75 aa8.93□□□□□ -0.98
SMC3-201ENST00000361804 A0A1B0GUS0 222 aa8.93□□□□□ -0.98
SMC3-201ENST00000361804 ZNF729A6NN14 1252 aaPredicted RBP8.93□□□□□ -0.98
SMC3-201ENST00000361804 WNT9BO14905 357 aa8.93□□□□□ -0.98
SMC3-201ENST00000361804 GRPP07492 148 aa8.93□□□□□ -0.98
SMC3-201ENST00000361804 MDH2P40926 338 aaKnown RBP8.93□□□□□ -0.98
SMC3-201ENST00000361804 CD81P60033 236 aa8.93□□□□□ -0.98
SMC3-201ENST00000361804 FIP1L1Q6UN15 594 aaKnown RBP8.93□□□□□ -0.98
SMC3-201ENST00000361804 ZNF826PQ6ZT77 177 aa8.93□□□□□ -0.98
SMC3-201ENST00000361804 SLC35E3Q7Z769 313 aa8.93□□□□□ -0.98
SMC3-201ENST00000361804 LRP11Q86VZ4 500 aa8.93□□□□□ -0.98
SMC3-201ENST00000361804 DMRTC2Q8IXT2 367 aaPredicted RBP8.93□□□□□ -0.98
SMC3-201ENST00000361804 Q8NFD4 153 aa8.93□□□□□ -0.98
SMC3-201ENST00000361804 C5orf30Q96GV9 206 aa8.93□□□□□ -0.98
SMC3-201ENST00000361804 C14orf144Q96I85 54 aa8.93□□□□□ -0.98
SMC3-201ENST00000361804 OR5H1A6NKK0 313 aa8.93□□□□□ -0.98
SMC3-201ENST00000361804 WISP2O76076 250 aa8.93□□□□□ -0.98
SMC3-201ENST00000361804 CEACAM1P13688 526 aa8.93□□□□□ -0.98
SMC3-201ENST00000361804 RPL30P62888 115 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms