RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 CLLU1Q5K131 121 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 NPAS1Q99742 590 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 UFC1Q9Y3C8 167 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 FABP4P15090 132 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 CAMPP49913 170 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 KRTDAPP60985 99 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 B2MP61769 119 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 ZNF79Q15937 498 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 ZNF561Q8N587 486 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 LEAP2Q969E1 77 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 STARD4Q96DR4 205 aa16■□□□□ 0.15
CLIP2-202ENST00000361545 IGHV3OR16-10A0A075B7F0 116 aa15.99■□□□□ 0.15
CLIP2-202ENST00000361545 IGHV1-69-2A0A0G2JMI3 117 aa15.99■□□□□ 0.15
CLIP2-202ENST00000361545 TMEM229AB2RXF0 380 aa15.99■□□□□ 0.15
CLIP2-202ENST00000361545 C9orf172C9J069 976 aa15.99■□□□□ 0.15
CLIP2-202ENST00000361545 TMEM37Q8WXS4 190 aa15.99■□□□□ 0.15
CLIP2-202ENST00000361545 SLC35B3Q9H1N7 401 aa15.99■□□□□ 0.15
CLIP2-202ENST00000361545 METTL1Q9UBP6 276 aaKnown RBP15.99■□□□□ 0.15
CLIP2-202ENST00000361545 ODAMA1E959 279 aa15.99■□□□□ 0.15
CLIP2-202ENST00000361545 TGOLN2O43493 480 aa15.99■□□□□ 0.15
CLIP2-202ENST00000361545 UMODP07911 640 aa15.99■□□□□ 0.15
CLIP2-202ENST00000361545 RPL27AP46776 148 aaKnown RBP15.99■□□□□ 0.15
CLIP2-202ENST00000361545 ALPK2Q86TB3 2170 aa15.99■□□□□ 0.15
CLIP2-202ENST00000361545 SMAD7O15105 426 aaKnown RBP15.99■□□□□ 0.15
CLIP2-202ENST00000361545 CD1AP06126 327 aa15.99■□□□□ 0.15
CLIP2-202ENST00000361545 GALR1P47211 349 aa15.99■□□□□ 0.15
CLIP2-202ENST00000361545 LILRB1Q8NHL6 650 aaPredicted RBP15.99■□□□□ 0.15
CLIP2-202ENST00000361545 EAF1Q96JC9 268 aaPredicted RBP15.99■□□□□ 0.15
CLIP2-202ENST00000361545 NOL4LQ96MY1 436 aaPredicted RBP15.99■□□□□ 0.15
CLIP2-202ENST00000361545 VPS25Q9BRG1 176 aa15.99■□□□□ 0.15
CLIP2-202ENST00000361545 PRDM14Q9GZV8 571 aa15.99■□□□□ 0.15
CLIP2-202ENST00000361545 DLL3Q9NYJ7 618 aa15.99■□□□□ 0.15
CLIP2-202ENST00000361545 IL19Q9UHD0 177 aa15.99■□□□□ 0.15
CLIP2-202ENST00000361545 HMSDA8MTL9 139 aa15.99■□□□□ 0.15
CLIP2-202ENST00000361545 SNRPCP09234 159 aaKnown RBP15.99■□□□□ 0.15
CLIP2-202ENST00000361545 PMCHP20382 165 aa15.99■□□□□ 0.15
CLIP2-202ENST00000361545 ARID2Q68CP9 1835 aa15.99■□□□□ 0.15
CLIP2-202ENST00000361545 NDUFA2O43678 99 aa15.98■□□□□ 0.15
CLIP2-202ENST00000361545 ISG15P05161 165 aa15.98■□□□□ 0.15
CLIP2-202ENST00000361545 LY6EQ16553 131 aa15.98■□□□□ 0.15
CLIP2-202ENST00000361545 ELOVL5Q9NYP7 299 aa15.98■□□□□ 0.15
CLIP2-202ENST00000361545 WNT5AP41221 380 aa15.98■□□□□ 0.15
CLIP2-202ENST00000361545 MRPL14Q6P1L8 145 aaKnown RBP15.98■□□□□ 0.15
CLIP2-202ENST00000361545 CALYQ9NYX4 217 aa15.98■□□□□ 0.15
CLIP2-202ENST00000361545 TCAPO15273 167 aa15.98■□□□□ 0.15
CLIP2-202ENST00000361545 TEPPQ6URK8 271 aa15.98■□□□□ 0.15
CLIP2-202ENST00000361545 AICDAQ9GZX7 198 aa15.98■□□□□ 0.15
CLIP2-202ENST00000361545 HAX1O00165 279 aa15.98■□□□□ 0.15
CLIP2-202ENST00000361545 RCC1P18754 421 aaPredicted RBP15.98■□□□□ 0.15
CLIP2-202ENST00000361545 PAFAH1B2P68402 229 aa15.98■□□□□ 0.15
CLIP2-202ENST00000361545 SLC25A53Q5H9E4 307 aa15.98■□□□□ 0.15
CLIP2-202ENST00000361545 HCP5Q6MZN7 132 aa15.98■□□□□ 0.15
CLIP2-202ENST00000361545 IMMP1LQ96LU5 166 aa15.98■□□□□ 0.15
CLIP2-202ENST00000361545 SDK2Q58EX2 2172 aa15.97■□□□□ 0.15
CLIP2-202ENST00000361545 CSRP1P21291 193 aaKnown RBP15.97■□□□□ 0.15
CLIP2-202ENST00000361545 HTR1DP28221 377 aa15.97■□□□□ 0.15
CLIP2-202ENST00000361545 PKIBQ9C010 78 aa15.97■□□□□ 0.15
CLIP2-202ENST00000361545 TFPI2P48307 235 aa15.97■□□□□ 0.15
CLIP2-202ENST00000361545 UQCC3Q6UW78 93 aa15.97■□□□□ 0.15
CLIP2-202ENST00000361545 PIKFYVEQ9Y2I7 2098 aa15.97■□□□□ 0.15
CLIP2-202ENST00000361545 C11orf94C9JXX5 98 aa15.97■□□□□ 0.15
CLIP2-202ENST00000361545 COX5BP10606 129 aa15.97■□□□□ 0.15
CLIP2-202ENST00000361545 ZP3P21754 424 aa15.97■□□□□ 0.15
CLIP2-202ENST00000361545 TMEM54Q969K7 222 aa15.97■□□□□ 0.15
CLIP2-202ENST00000361545 PERPQ96FX8 193 aa15.97■□□□□ 0.15
CLIP2-202ENST00000361545 SMPD2O60906 423 aa15.97■□□□□ 0.15
CLIP2-202ENST00000361545 ZNF66Q6ZN08 573 aa15.97■□□□□ 0.15
CLIP2-202ENST00000361545 OPN4Q9UHM6 478 aa15.97■□□□□ 0.15
CLIP2-202ENST00000361545 ORM1P02763 201 aa15.97■□□□□ 0.15
CLIP2-202ENST00000361545 MC5RP33032 325 aa15.97■□□□□ 0.15
CLIP2-202ENST00000361545 RNASEKQ6P5S7 137 aaKnown RBP15.97■□□□□ 0.15
CLIP2-202ENST00000361545 ZIC3O60481 467 aa15.96■□□□□ 0.15
CLIP2-202ENST00000361545 IGF2P01344 180 aa15.96■□□□□ 0.15
CLIP2-202ENST00000361545 GPHA2Q96T91 129 aa15.96■□□□□ 0.15
CLIP2-202ENST00000361545 MIOXQ9UGB7 285 aa15.96■□□□□ 0.15
CLIP2-202ENST00000361545 KIAA1324LA8MWY0 1029 aaPredicted RBP15.96■□□□□ 0.15
CLIP2-202ENST00000361545 PDLIM4P50479 330 aa15.96■□□□□ 0.15
CLIP2-202ENST00000361545 UBE2V2Q15819 145 aa15.96■□□□□ 0.15
CLIP2-202ENST00000361545 TMEM18Q96B42 140 aa15.96■□□□□ 0.15
CLIP2-202ENST00000361545 G6PC2Q9NQR9 355 aa15.96■□□□□ 0.15
CLIP2-202ENST00000361545 CCDC88CQ9P219 2028 aa15.96■□□□□ 0.15
CLIP2-202ENST00000361545 PTPRFP10586 1907 aa15.96■□□□□ 0.15
CLIP2-202ENST00000361545 LOC105371242A0A075B767 164 aa15.96■□□□□ 0.15
CLIP2-202ENST00000361545 B9A039 149 aa15.96■□□□□ 0.15
CLIP2-202ENST00000361545 IFNL4K9M1U5 179 aa15.96■□□□□ 0.15
CLIP2-202ENST00000361545 RAB5AP20339 215 aa15.96■□□□□ 0.15
CLIP2-202ENST00000361545 NPBWR2P48146 333 aa15.96■□□□□ 0.15
CLIP2-202ENST00000361545 RHOVQ96L33 236 aa15.96■□□□□ 0.15
CLIP2-202ENST00000361545 RBFOX3A6NFN3 312 aa15.96■□□□□ 0.14
CLIP2-202ENST00000361545 CLDN34H7C241 214 aa15.96■□□□□ 0.14
CLIP2-202ENST00000361545 TCL1AP56279 114 aa15.96■□□□□ 0.14
CLIP2-202ENST00000361545 C1QTNF12Q5T7M4 302 aa15.96■□□□□ 0.14
CLIP2-202ENST00000361545 LINC01590Q5TEZ4 76 aa15.96■□□□□ 0.14
CLIP2-202ENST00000361545 OR11H7Q8NGC8 314 aa15.96■□□□□ 0.14
CLIP2-202ENST00000361545 IDI2-AS1Q9NZ38 188 aa15.96■□□□□ 0.14
CLIP2-202ENST00000361545 WASHC3Q9Y3C0 194 aa15.96■□□□□ 0.14
CLIP2-202ENST00000361545 PHOX2AO14813 284 aa15.95■□□□□ 0.14
CLIP2-202ENST00000361545 MBPP02686 304 aaPredicted RBP15.95■□□□□ 0.14
CLIP2-202ENST00000361545 FAM157CP0CG43 387 aa15.95■□□□□ 0.14
CLIP2-202ENST00000361545 TIMM23BQ5SRD1 257 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms