RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 FAM221AA4D161 298 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 A6NLC8 198 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 CDIPTO14735 213 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 OR7C1O76099 320 aaPredicted RBP11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 CDS2O95674 445 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 CD3EP07766 207 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 ADAM5Q6NVV9 412 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 BRICD5Q6PL45 260 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 LINC00596Q86U02 117 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 FAM58AQ8N1B3 248 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 LFNGQ8NES3 379 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 SECTM1Q8WVN6 248 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 PLPPR2Q96GM1 343 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 SPIN2AQ99865 258 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 SPIN2BQ9BPZ2 258 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 MRPL37Q9BZE1 423 aaKnown RBP11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 EIF5A2Q9GZV4 153 aaKnown RBP11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 RPS10P5Q9NQ39 176 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 C19orf12Q9NSK7 152 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 KMT2BQ9UMN6 2715 aaPredicted RBP11.08□□□□□ -0.64
SQSTM1-201ENST00000360718 PKDREJQ9NTG1 2253 aa11.08□□□□□ -0.64
SQSTM1-201ENST00000360718 C3orf85A0A1B0GTC6 90 aa11.08□□□□□ -0.64
SQSTM1-201ENST00000360718 C9JQL5 133 aa11.08□□□□□ -0.64
SQSTM1-201ENST00000360718 SIAH2O43255 324 aa11.08□□□□□ -0.64
SQSTM1-201ENST00000360718 AGAP20933 346 aa11.08□□□□□ -0.64
SQSTM1-201ENST00000360718 MEOX2P50222 304 aa11.08□□□□□ -0.64
SQSTM1-201ENST00000360718 SRSF7Q16629 238 aaKnown RBP eCLIP11.08□□□□□ -0.644e-8■□□□□ 9.2
SQSTM1-201ENST00000360718 MPV17LQ2QL34 196 aa11.08□□□□□ -0.64
SQSTM1-201ENST00000360718 RNF212Q495C1 297 aa11.08□□□□□ -0.64
SQSTM1-201ENST00000360718 FIP1L1Q6UN15 594 aaKnown RBP11.08□□□□□ -0.64
SQSTM1-201ENST00000360718 ZNF808Q8N4W9 903 aaPredicted RBP11.08□□□□□ -0.64
SQSTM1-201ENST00000360718 ITLN2Q8WWU7 325 aaPredicted RBP11.08□□□□□ -0.64
SQSTM1-201ENST00000360718 DYRK2Q92630 601 aa11.08□□□□□ -0.64
SQSTM1-201ENST00000360718 HS3ST6Q96QI5 342 aa11.08□□□□□ -0.64
SQSTM1-201ENST00000360718 TUBA4BQ9H853 241 aa11.08□□□□□ -0.64
SQSTM1-201ENST00000360718 ZMAT5Q9UDW3 170 aaKnown RBP11.08□□□□□ -0.64
SQSTM1-201ENST00000360718 RCL1Q9Y2P8 373 aaKnown RBP11.08□□□□□ -0.64
SQSTM1-201ENST00000360718 HRNRQ86YZ3 2850 aaPredicted RBP11.08□□□□□ -0.64
SQSTM1-201ENST00000360718 COL12A1Q99715 3063 aa11.08□□□□□ -0.64
SQSTM1-201ENST00000360718 C1orf196B1AJZ1 125 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 MPPED1O15442 326 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 RHBDL1O75783 438 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 CLDN14O95500 239 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 PPYP01298 95 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 AADACP22760 399 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 DAZAP2Q15038 168 aaPredicted RBP11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 Q6ZS49 121 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 DMRTC2Q8IXT2 367 aaPredicted RBP11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 ZNF843Q8N446 348 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 OR52M1Q8NGK5 317 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 OR4D5Q8NGN0 318 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 EGLN1Q9GZT9 426 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 WFDC1Q9HC57 220 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 ABCA4P78363 2273 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 USP9XQ93008 2570 aaPredicted RBP11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 NXPH2O95156 264 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 ZNF205O95201 554 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 TNFSF4P23510 183 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 ZNF266Q14584 549 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 AKIRIN2Q53H80 203 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 CLEC9AQ6UXN8 241 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 LURAP1LQ8IV03 231 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 SLC35G3Q8N808 338 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 ZNF565Q8N9K5 539 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 C14orf79Q96F83 325 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 ABHD14BQ96IU4 210 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 ZNF488Q96MN9 340 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 PARP12Q9H0J9 701 aaKnown RBP11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 SMDT1Q9H4I9 107 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 UBE2J1Q9Y385 318 aaPredicted RBP11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 CACNA1DQ01668 2161 aa11.07□□□□□ -0.64
SQSTM1-201ENST00000360718 TRDCB7Z8K6 153 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 MT-ND4LP03901 98 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 TK1P04183 234 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 ACAA1P09110 424 aaPredicted RBP11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 OR4A8P0C604 315 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 PGA5P0DJD9 388 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 CD200P41217 278 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 MEX3BQ6ZN04 569 aaKnown RBP11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 ZNF695Q8IW36 515 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 OR11L1Q8NGX0 322 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 NEUROG1Q92886 237 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 BSCL2Q96G97 398 aaPredicted RBP11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 SLC25A31Q9H0C2 315 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 TMEM222Q9H0R3 208 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 SPACA1Q9HBV2 294 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 ZDHHC8Q9ULC8 765 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 LRBAP50851 2863 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 CHD6Q8TD26 2715 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 MYO18BQ8IUG5 2567 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 DYSFO75923 2080 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 SHISA9B4DS77 424 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 SPRY3O43610 288 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 RND3P61587 244 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 HOXA4Q00056 320 aaPredicted RBP11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 NHLH2Q02577 135 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 ADIPOQQ15848 244 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 SPRNQ5BIV9 151 aa11.06□□□□□ -0.64
SQSTM1-201ENST00000360718 PRAMEF6Q5VXH4 476 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms