RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 CDH26Q8IXH8 852 aa4.43□□□□□ -1.7
CDC42SE2-201ENST00000360515 LINC00518Q8N0U6 118 aa4.43□□□□□ -1.7
CDC42SE2-201ENST00000360515 LHFPL5Q8TAF8 219 aa4.43□□□□□ -1.7
CDC42SE2-201ENST00000360515 JAM3Q9BX67 310 aa4.43□□□□□ -1.7
CDC42SE2-201ENST00000360515 RETNQ9HD89 108 aa4.43□□□□□ -1.7
CDC42SE2-201ENST00000360515 SLC2A8Q9NY64 477 aa4.43□□□□□ -1.7
CDC42SE2-201ENST00000360515 MAGEL2Q9UJ55 1249 aa4.43□□□□□ -1.7
CDC42SE2-201ENST00000360515 COPS3Q9UNS2 423 aa4.43□□□□□ -1.7
CDC42SE2-201ENST00000360515 SORL1Q92673 2214 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 H3BMQ9 156 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 J3QRE1 110 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 BET1O15155 118 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 YPEL1O60688 119 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 RPS27P42677 84 aaKnown RBP4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 OR5AN1Q8NGI8 311 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 PHLDA1Q8WV24 401 aaPredicted RBP4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 YPEL2Q96QA6 119 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 ZNF251Q9BRH9 671 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 SRD5A3Q9H8P0 318 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 CLN6Q9NWW5 311 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 OR52A1Q9UKL2 312 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 OR5H14A6NHG9 310 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 APOC4P55056 127 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 MRGPRG-AS1Q2M3A8 158 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 MPV17LQ2QL34 196 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 ANKRD55Q3KP44 614 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 TMEM41BQ5BJD5 291 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 ZNF880Q6PDB4 577 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 OR5H6Q8NGV6 325 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 OR6N2Q8NGY6 317 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 CNIH3Q8TBE1 160 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 MARC2Q969Z3 335 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 SLAMF9Q96A28 289 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 PTX4Q96A99 478 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 MYRFQ9Y2G1 1151 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 DIRAS3O95661 229 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 GASTP01350 101 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 CLUP10909 449 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 NPBWR2P48146 333 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 DYRK1AQ13627 763 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 ALKBH1Q13686 389 aaKnown RBP4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 GFOD2Q3B7J2 385 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 C9orf152Q5JTZ5 239 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 C2CD4CQ8TF44 421 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 RGP1Q92546 391 aaPredicted RBP4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 GPR173Q9NS66 373 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 JPT1Q9UK76 154 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 AP4S1Q9Y587 144 aa4.42□□□□□ -1.7
CDC42SE2-201ENST00000360515 TRBV6-6A0A0A6YYG2 114 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 TCRBV5S2A0A599 114 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 PRSS29PA6NIE9 313 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 RRHO14718 337 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 HSPA13P48723 471 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 CDK10Q15131 360 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 GRPEL2Q8TAA5 225 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 RBFOX1Q9NWB1 397 aaKnown RBP4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 PEF1Q9UBV8 284 aaKnown RBP4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 DHDHQ9UQ10 334 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 HMCN2Q8NDA2 5059 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 TRAV2A0A0B4J234 112 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 DEDDO75618 318 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 FABP3P05413 133 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 CD37P11049 281 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 ZNF182P17025 639 aaPredicted RBP4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 DCKP27707 260 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 CMC4P56277 68 aaPredicted RBP4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 RAB25P57735 213 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 AESQ08117 197 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 ZNF846Q147U1 533 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 SRSF7Q16629 238 aaKnown RBP eCLIP4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 SLC25A30Q5SVS4 291 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 BCL2L15Q5TBC7 163 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 PQLC1Q8N2U9 271 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 PARP16Q8N5Y8 322 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 OPALINQ96PE5 141 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 TSSK6Q9BXA6 273 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 ZNF436Q9C0F3 470 aaPredicted RBP4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 TUBA4BQ9H853 241 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 IL36RNQ9UBH0 155 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 OR14J1Q9UGF5 321 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 ENOPH1Q9UHY7 261 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 TAGLN3Q9UI15 199 aa4.41□□□□□ -1.7
CDC42SE2-201ENST00000360515 A0A0J9YWU9 116 aa4.4□□□□□ -1.7
CDC42SE2-201ENST00000360515 H3BSH0 61 aa4.4□□□□□ -1.7
CDC42SE2-201ENST00000360515 SELENOFO60613 162 aa4.4□□□□□ -1.7
CDC42SE2-201ENST00000360515 KRT8P05787 483 aa4.4□□□□□ -1.7
CDC42SE2-201ENST00000360515 PIPP12273 146 aaPredicted RBP4.4□□□□□ -1.7
CDC42SE2-201ENST00000360515 TATDN3Q17R31 274 aa4.4□□□□□ -1.7
CDC42SE2-201ENST00000360515 RNF212Q495C1 297 aa4.4□□□□□ -1.7
CDC42SE2-201ENST00000360515 CT45A1Q5HYN5 189 aa4.4□□□□□ -1.7
CDC42SE2-201ENST00000360515 C6orf141Q5SZD1 244 aa4.4□□□□□ -1.7
CDC42SE2-201ENST00000360515 LIN54Q6MZP7 749 aa4.4□□□□□ -1.7
CDC42SE2-201ENST00000360515 PLEKHG7Q6ZR37 379 aa4.4□□□□□ -1.7
CDC42SE2-201ENST00000360515 SLC25A26Q70HW3 274 aa4.4□□□□□ -1.7
CDC42SE2-201ENST00000360515 FKBP9P1Q75LS8 142 aa4.4□□□□□ -1.7
CDC42SE2-201ENST00000360515 CT45A3Q8NHU0 189 aa4.4□□□□□ -1.7
CDC42SE2-201ENST00000360515 ALG8Q9BVK2 526 aa4.4□□□□□ -1.7
CDC42SE2-201ENST00000360515 ALX4Q9H161 411 aaPredicted RBP4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms