RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 MPLP40238 635 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 TEX30Q5JUR7 227 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 FAM209AQ5JX71 171 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 OR5A1Q8NGJ0 315 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 NRIP2Q9BQI9 281 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 QTRT1Q9BXR0 403 aaKnown RBP8.16□□□□□ -1.1
VPS13A-203ENST00000360280 PDFQ9HBH1 243 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 WNT5AP41221 380 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 OR8G5Q8NG78 346 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 OR11H7Q8NGC8 314 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 AICDAQ9GZX7 198 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 HEXA-AS1Q9H8Q6 139 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 EPHA8P29322 1005 aaPredicted RBP8.16□□□□□ -1.1
VPS13A-203ENST00000360280 C1orf174Q8IYL3 243 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 OR5AC2Q9NZP5 309 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 TMEM56-RWDD3S4R434 201 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 NHSQ6T4R5 1651 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 PI4KAP42356 2102 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 TRGC2P03986 189 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 SAMD13Q5VXD3 122 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 SLC17A3O00476 420 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 HSPB1P04792 205 aaKnown RBP8.16□□□□□ -1.1
VPS13A-203ENST00000360280 OR6X1Q8NH79 312 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 CNRIP1Q96F85 164 aaPredicted RBP8.16□□□□□ -1.1
VPS13A-203ENST00000360280 SH2D5Q6ZV89 423 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 OR1K1Q8NGR3 316 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 A0A1W2PQM1 296 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 A1L4Q6 167 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 K7N7A8 449 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 METTL1Q9UBP6 276 aaKnown RBP8.16□□□□□ -1.1
VPS13A-203ENST00000360280 FGF5P12034 268 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 COL22A1Q8NFW1 1626 aaPredicted RBP8.16□□□□□ -1.1
VPS13A-203ENST00000360280 RBMY1BA6NDE4 496 aaKnown RBP8.16□□□□□ -1.1
VPS13A-203ENST00000360280 RBMY1EA6NEQ0 496 aaKnown RBP8.16□□□□□ -1.1
VPS13A-203ENST00000360280 RBMY1DP0C7P1 496 aaKnown RBP8.16□□□□□ -1.1
VPS13A-203ENST00000360280 RBMY1A1P0DJD3 496 aaKnown RBP8.16□□□□□ -1.1
VPS13A-203ENST00000360280 RBMY1CP0DJD4 496 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 EIF3IQ13347 325 aaKnown RBP8.16□□□□□ -1.1
VPS13A-203ENST00000360280 GCSAMLQ5JQS6 135 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 TMEM101Q96IK0 257 aa8.16□□□□□ -1.1
VPS13A-203ENST00000360280 HYPMO75409 117 aa8.15□□□□□ -1.1
VPS13A-203ENST00000360280 GPR35Q9HC97 309 aa8.15□□□□□ -1.1
VPS13A-203ENST00000360280 SBK3P0C264 359 aa8.15□□□□□ -1.1
VPS13A-203ENST00000360280 KLF9Q13886 244 aaPredicted RBP8.15□□□□□ -1.1
VPS13A-203ENST00000360280 PSMG4Q5JS54 123 aa8.15□□□□□ -1.1
VPS13A-203ENST00000360280 PQLC2Q6ZP29 291 aa8.15□□□□□ -1.1
VPS13A-203ENST00000360280 PATE1Q8WXA2 126 aa8.15□□□□□ -1.1
VPS13A-203ENST00000360280 TMEM250H0YL14 139 aa8.15□□□□□ -1.1
VPS13A-203ENST00000360280 CA1P00915 261 aaPredicted RBP8.15□□□□□ -1.1
VPS13A-203ENST00000360280 INSL4Q14641 139 aa8.15□□□□□ -1.1
VPS13A-203ENST00000360280 RTN4RL1Q86UN2 441 aaPredicted RBP8.15□□□□□ -1.1
VPS13A-203ENST00000360280 PSG2P11465 335 aa8.15□□□□□ -1.1
VPS13A-203ENST00000360280 NKX2-2O95096 273 aa8.15□□□□□ -1.1
VPS13A-203ENST00000360280 HPRT1P00492 218 aa8.15□□□□□ -1.1
VPS13A-203ENST00000360280 ANKRD34AQ69YU3 496 aa8.15□□□□□ -1.1
VPS13A-203ENST00000360280 ZDHHC8Q9ULC8 765 aa8.15□□□□□ -1.1
VPS13A-203ENST00000360280 FZR1Q9UM11 496 aa8.15□□□□□ -1.1
VPS13A-203ENST00000360280 MUC1P15941 1255 aaPredicted RBP8.15□□□□□ -1.1
VPS13A-203ENST00000360280 PLAURQ03405 335 aa8.15□□□□□ -1.1
VPS13A-203ENST00000360280 TRBV5-4A0A0C4DH59 114 aa8.15□□□□□ -1.11
VPS13A-203ENST00000360280 PGLYRP3Q96LB9 341 aa8.15□□□□□ -1.11
VPS13A-203ENST00000360280 RGP1Q92546 391 aaPredicted RBP8.15□□□□□ -1.11
VPS13A-203ENST00000360280 MS4A7Q9GZW8 240 aaPredicted RBP8.15□□□□□ -1.11
VPS13A-203ENST00000360280 LMO7DNF2Z398 122 aa8.15□□□□□ -1.11
VPS13A-203ENST00000360280 ANOS1P23352 680 aa8.15□□□□□ -1.11
VPS13A-203ENST00000360280 MVDP53602 400 aa8.15□□□□□ -1.11
VPS13A-203ENST00000360280 PTPMT1Q8WUK0 201 aaPredicted RBP8.15□□□□□ -1.11
VPS13A-203ENST00000360280 ATP6V0CP27449 155 aa8.15□□□□□ -1.11
VPS13A-203ENST00000360280 SUMO2P61956 95 aaKnown RBP8.15□□□□□ -1.11
VPS13A-203ENST00000360280 C17orf99Q6UX52 265 aa8.15□□□□□ -1.11
VPS13A-203ENST00000360280 NEU1Q99519 415 aa8.15□□□□□ -1.11
VPS13A-203ENST00000360280 C19orf24Q9BVV8 132 aa8.15□□□□□ -1.11
VPS13A-203ENST00000360280 BHLHA15Q7RTS1 189 aaPredicted RBP8.15□□□□□ -1.11
VPS13A-203ENST00000360280 ASB16Q96NS5 453 aa8.15□□□□□ -1.11
VPS13A-203ENST00000360280 DERL1Q9BUN8 251 aa8.15□□□□□ -1.11
VPS13A-203ENST00000360280 SHISA7A6NL88 538 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 ZNF815PA8K554 130 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 TMEM50AO95807 157 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 SPNS2Q8IVW8 549 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 C17orf47Q8NEP4 570 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 GPR82Q96P67 336 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 HDHD3Q9BSH5 251 aaPredicted RBP8.14□□□□□ -1.11
VPS13A-203ENST00000360280 AURKAIP1Q9NWT8 199 aaPredicted RBP8.14□□□□□ -1.11
VPS13A-203ENST00000360280 DDB2Q92466 427 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 APC2O95996 2303 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 EIF3GO75821 320 aaKnown RBP eCLIP8.14□□□□□ -1.11
VPS13A-203ENST00000360280 NDUFB4O95168 129 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 PDCD1Q15116 288 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 ANAPC13Q9BS18 74 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 SMOC1Q9H4F8 434 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 RALGAPA2Q2PPJ7 1873 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 A0A1B0GWB2 263 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 GLULP15104 373 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 WFDC5Q8TCV5 224 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 CBLN4Q9NTU7 201 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 CEACAM18A8MTB9 384 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 FCGR2BP31994 310 aaPredicted RBP8.14□□□□□ -1.11
VPS13A-203ENST00000360280 OR13C6PQ8NH95 151 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 NKX2-6A6NCS4 301 aa8.14□□□□□ -1.11
VPS13A-203ENST00000360280 SLC25A20O43772 301 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms