RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 WDR89Q96FK6 387 aaPredicted RBP19.13■□□□□ 0.65
SDF4-202ENST00000360001 GPHA2Q96T91 129 aa19.13■□□□□ 0.65
SDF4-202ENST00000360001 GNG12Q9UBI6 72 aa19.13■□□□□ 0.65
SDF4-202ENST00000360001 KCNIP3Q9Y2W7 256 aa19.13■□□□□ 0.65
SDF4-202ENST00000360001 GIPP09681 153 aaPredicted RBP19.13■□□□□ 0.65
SDF4-202ENST00000360001 C11orf91Q3C1V1 193 aa19.13■□□□□ 0.65
SDF4-202ENST00000360001 SP6Q3SY56 376 aa19.13■□□□□ 0.65
SDF4-202ENST00000360001 TMEM200BQ69YZ2 307 aa19.13■□□□□ 0.65
SDF4-202ENST00000360001 TAS2R3Q9NYW6 316 aa19.13■□□□□ 0.65
SDF4-202ENST00000360001 CCSO14618 274 aa19.12■□□□□ 0.65
SDF4-202ENST00000360001 YPEL1O60688 119 aa19.12■□□□□ 0.65
SDF4-202ENST00000360001 TMEM187Q14656 261 aa19.12■□□□□ 0.65
SDF4-202ENST00000360001 MORN2Q502X0 79 aa19.12■□□□□ 0.65
SDF4-202ENST00000360001 YPEL2Q96QA6 119 aa19.12■□□□□ 0.65
SDF4-202ENST00000360001 LPAR3Q9UBY5 353 aa19.12■□□□□ 0.65
SDF4-202ENST00000360001 PGLYRP1O75594 196 aaPredicted RBP19.12■□□□□ 0.65
SDF4-202ENST00000360001 NKX2-5P52952 324 aaPredicted RBP19.12■□□□□ 0.65
SDF4-202ENST00000360001 AKR1E2Q96JD6 320 aa19.12■□□□□ 0.65
SDF4-202ENST00000360001 TP53RKQ96S44 253 aa19.12■□□□□ 0.65
SDF4-202ENST00000360001 SUCNR1Q9BXA5 334 aa19.12■□□□□ 0.65
SDF4-202ENST00000360001 KCNS2Q9ULS6 477 aa19.12■□□□□ 0.65
SDF4-202ENST00000360001 CRYBG3Q68DQ2 2970 aa19.11■□□□□ 0.65
SDF4-202ENST00000360001 C3orf85A0A1B0GTC6 90 aa19.11■□□□□ 0.65
SDF4-202ENST00000360001 TNFSF12O43508 249 aa19.11■□□□□ 0.65
SDF4-202ENST00000360001 C1QBP02746 253 aa19.11■□□□□ 0.65
SDF4-202ENST00000360001 UTF1Q5T230 341 aa19.11■□□□□ 0.65
SDF4-202ENST00000360001 GLYATL2Q8WU03 294 aa19.11■□□□□ 0.65
SDF4-202ENST00000360001 CCL19Q99731 98 aa19.11■□□□□ 0.65
SDF4-202ENST00000360001 AGMATQ9BSE5 352 aa19.11■□□□□ 0.65
SDF4-202ENST00000360001 GFOD1Q9NXC2 390 aa19.11■□□□□ 0.65
SDF4-202ENST00000360001 IDI2-AS1Q9NZ38 188 aa19.11■□□□□ 0.65
SDF4-202ENST00000360001 MIOXQ9UGB7 285 aa19.11■□□□□ 0.65
SDF4-202ENST00000360001 RNF150Q9ULK6 438 aa19.11■□□□□ 0.65
SDF4-202ENST00000360001 MMP23AO75900 390 aa19.1■□□□□ 0.65
SDF4-202ENST00000360001 WNT2P09544 360 aa19.1■□□□□ 0.65
SDF4-202ENST00000360001 DRAM1Q8N682 238 aa19.1■□□□□ 0.65
SDF4-202ENST00000360001 ZNF645Q8N7E2 425 aa19.1■□□□□ 0.65
SDF4-202ENST00000360001 OR2D2Q9H210 308 aa19.1■□□□□ 0.65
SDF4-202ENST00000360001 GAL3ST2Q9H3Q3 398 aa19.1■□□□□ 0.65
SDF4-202ENST00000360001 DOCK11Q5JSL3 2073 aa19.1■□□□□ 0.65
SDF4-202ENST00000360001 G3V3Q6 166 aa19.1■□□□□ 0.65
SDF4-202ENST00000360001 J3QKU1 62 aa19.1■□□□□ 0.65
SDF4-202ENST00000360001 PHF1O43189 567 aaPredicted RBP19.1■□□□□ 0.65
SDF4-202ENST00000360001 CCL3L1P16619 93 aa19.1■□□□□ 0.65
SDF4-202ENST00000360001 RAP2BP61225 183 aa19.1■□□□□ 0.65
SDF4-202ENST00000360001 TENM4Q6N022 2769 aa19.1■□□□□ 0.65
SDF4-202ENST00000360001 NOXA1Q86UR1 476 aa19.1■□□□□ 0.65
SDF4-202ENST00000360001 EDARADDQ8WWZ3 215 aa19.1■□□□□ 0.65
SDF4-202ENST00000360001 MSI2Q96DH6 328 aaKnown RBP19.1■□□□□ 0.65
SDF4-202ENST00000360001 NEIL1Q96FI4 390 aaPredicted RBP19.1■□□□□ 0.65
SDF4-202ENST00000360001 ZNF714Q96N38 554 aa19.1■□□□□ 0.65
SDF4-202ENST00000360001 RAB18Q9NP72 206 aa19.1■□□□□ 0.65
SDF4-202ENST00000360001 TACC2O95359 2948 aa19.09■□□□□ 0.65
SDF4-202ENST00000360001 YLPM1P49750 1951 aaKnown RBP19.09■□□□□ 0.65
SDF4-202ENST00000360001 USP9YO00507 2555 aaPredicted RBP19.09■□□□□ 0.65
SDF4-202ENST00000360001 ADAP1O75689 374 aa19.09■□□□□ 0.65
SDF4-202ENST00000360001 PRAMEF5Q5TYX0 476 aa19.09■□□□□ 0.65
SDF4-202ENST00000360001 ZNF295-AS1Q8N0V1 137 aa19.09■□□□□ 0.65
SDF4-202ENST00000360001 OR8B3Q8NGG8 313 aa19.09■□□□□ 0.65
SDF4-202ENST00000360001 OR2T35Q8NGX2 323 aa19.09■□□□□ 0.65
SDF4-202ENST00000360001 C5orf30Q96GV9 206 aa19.09■□□□□ 0.65
SDF4-202ENST00000360001 OR8B2Q96RD0 313 aa19.09■□□□□ 0.65
SDF4-202ENST00000360001 PSG11Q9UQ72 335 aa19.09■□□□□ 0.65
SDF4-202ENST00000360001 MALRD1Q5VYJ5 2156 aa19.09■□□□□ 0.65
SDF4-202ENST00000360001 TRBV23-1A0A0A0MS06 115 aa19.08■□□□□ 0.65
SDF4-202ENST00000360001 ST8SIA5O15466 376 aa19.08■□□□□ 0.65
SDF4-202ENST00000360001 IGHV4-39P01824 125 aa19.08■□□□□ 0.65
SDF4-202ENST00000360001 S100GP29377 79 aa19.08■□□□□ 0.65
SDF4-202ENST00000360001 GPR6P46095 362 aaPredicted RBP19.08■□□□□ 0.65
SDF4-202ENST00000360001 GZMKP49863 264 aa19.08■□□□□ 0.65
SDF4-202ENST00000360001 SRSF4Q08170 494 aaKnown RBP19.08■□□□□ 0.65
SDF4-202ENST00000360001 TMEM30BQ3MIR4 351 aa19.08■□□□□ 0.65
SDF4-202ENST00000360001 LIAT1Q6ZQX7 453 aa19.08■□□□□ 0.65
SDF4-202ENST00000360001 LRTM2Q8N967 370 aa19.08■□□□□ 0.65
SDF4-202ENST00000360001 OR52M1Q8NGK5 317 aa19.08■□□□□ 0.65
SDF4-202ENST00000360001 RGS11O94810 467 aa19.08■□□□□ 0.64
SDF4-202ENST00000360001 IGHV3-7P01780 117 aa19.08■□□□□ 0.64
SDF4-202ENST00000360001 F2RP25116 425 aa19.08■□□□□ 0.64
SDF4-202ENST00000360001 ZNF134P52741 427 aa19.08■□□□□ 0.64
SDF4-202ENST00000360001 Q5BKY6 102 aa19.08■□□□□ 0.64
SDF4-202ENST00000360001 FAM216AQ8WUB2 273 aa19.08■□□□□ 0.64
SDF4-202ENST00000360001 ASB13Q8WXK3 278 aa19.08■□□□□ 0.64
SDF4-202ENST00000360001 LEAP2Q969E1 77 aa19.08■□□□□ 0.64
SDF4-202ENST00000360001 TMEM222Q9H0R3 208 aa19.08■□□□□ 0.64
SDF4-202ENST00000360001 RPUSD1Q9UJJ7 312 aaKnown RBP19.08■□□□□ 0.64
SDF4-202ENST00000360001 GPR37O15354 613 aa19.07■□□□□ 0.64
SDF4-202ENST00000360001 NFYBP25208 207 aa19.07■□□□□ 0.64
SDF4-202ENST00000360001 DLX6P56179 175 aa19.07■□□□□ 0.64
SDF4-202ENST00000360001 ERVFRD-1P60508 538 aa19.07■□□□□ 0.64
SDF4-202ENST00000360001 MSMO1Q15800 293 aa19.07■□□□□ 0.64
SDF4-202ENST00000360001 WDR25Q64LD2 544 aaPredicted RBP19.07■□□□□ 0.64
SDF4-202ENST00000360001 HEPN1Q6WQI6 88 aa19.07■□□□□ 0.64
SDF4-202ENST00000360001 ZBTB34Q8NCN2 500 aa19.07■□□□□ 0.64
SDF4-202ENST00000360001 OR10A7Q8NGE5 316 aa19.07■□□□□ 0.64
SDF4-202ENST00000360001 LHFPL5Q8TAF8 219 aa19.07■□□□□ 0.64
SDF4-202ENST00000360001 ABHD14BQ96IU4 210 aa19.07■□□□□ 0.64
SDF4-202ENST00000360001 PATZ1Q9HBE1 687 aaKnown RBP19.07■□□□□ 0.64
SDF4-202ENST00000360001 FAM25EA8MYX2 175 aa19.06■□□□□ 0.64
SDF4-202ENST00000360001 H0Y980 276 aa19.06■□□□□ 0.64
SDF4-202ENST00000360001 EIF4EBP1Q13541 118 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms