RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 MDP1Q86V88 176 aa13.96□□□□□ -0.17
COL18A1-203ENST00000359759 C1QL1O75973 258 aa13.96□□□□□ -0.17
COL18A1-203ENST00000359759 CTGFP29279 349 aa13.96□□□□□ -0.17
COL18A1-203ENST00000359759 PLPPR5Q32ZL2 321 aa13.96□□□□□ -0.17
COL18A1-203ENST00000359759 METTL26Q96S19 204 aa13.96□□□□□ -0.17
COL18A1-203ENST00000359759 DMRTA2Q96SC8 542 aa13.96□□□□□ -0.17
COL18A1-203ENST00000359759 PRSS27Q9BQR3 290 aa13.96□□□□□ -0.17
COL18A1-203ENST00000359759 PPP1R17O96001 155 aa13.96□□□□□ -0.17
COL18A1-203ENST00000359759 LSM6P62312 80 aaKnown RBP13.96□□□□□ -0.17
COL18A1-203ENST00000359759 SGK494Q96LW2 274 aa13.96□□□□□ -0.17
COL18A1-203ENST00000359759 HSPB7Q9UBY9 170 aa13.96□□□□□ -0.17
COL18A1-203ENST00000359759 ZIC1Q15915 447 aa13.96□□□□□ -0.18
COL18A1-203ENST00000359759 TMEM78Q5T7P6 136 aa13.96□□□□□ -0.18
COL18A1-203ENST00000359759 OR4C13Q8NGP0 309 aa13.96□□□□□ -0.18
COL18A1-203ENST00000359759 ZCCHC14Q8WYQ9 949 aaKnown RBP13.96□□□□□ -0.18
COL18A1-203ENST00000359759 FOXC2Q99958 501 aa13.96□□□□□ -0.18
COL18A1-203ENST00000359759 COL25A1Q9BXS0 654 aaPredicted RBP13.96□□□□□ -0.18
COL18A1-203ENST00000359759 AMY1AP04745 511 aa13.95□□□□□ -0.18
COL18A1-203ENST00000359759 RBKSQ9H477 322 aa13.95□□□□□ -0.18
COL18A1-203ENST00000359759 MOB4Q9Y3A3 225 aa13.95□□□□□ -0.18
COL18A1-203ENST00000359759 TMEM91Q6ZNR0 172 aa13.95□□□□□ -0.18
COL18A1-203ENST00000359759 CBLN4Q9NTU7 201 aa13.95□□□□□ -0.18
COL18A1-203ENST00000359759 SS18L1O75177 396 aaPredicted RBP13.95□□□□□ -0.18
COL18A1-203ENST00000359759 TEX30Q5JUR7 227 aa13.95□□□□□ -0.18
COL18A1-203ENST00000359759 EBLN2Q6P2I7 272 aa13.95□□□□□ -0.18
COL18A1-203ENST00000359759 IL11P20809 199 aa13.95□□□□□ -0.18
COL18A1-203ENST00000359759 KIAA1644Q3SXP7 199 aa13.95□□□□□ -0.18
COL18A1-203ENST00000359759 ZNF506Q5JVG8 444 aa13.95□□□□□ -0.18
COL18A1-203ENST00000359759 H1FOOQ8IZA3 346 aaPredicted RBP13.95□□□□□ -0.18
COL18A1-203ENST00000359759 SYT8Q8NBV8 401 aa13.95□□□□□ -0.18
COL18A1-203ENST00000359759 STXBP6Q8NFX7 210 aa13.95□□□□□ -0.18
COL18A1-203ENST00000359759 CADM4Q8NFZ8 388 aa13.95□□□□□ -0.18
COL18A1-203ENST00000359759 LHFPL5Q8TAF8 219 aa13.95□□□□□ -0.18
COL18A1-203ENST00000359759 EID2BQ96D98 161 aa13.95□□□□□ -0.18
COL18A1-203ENST00000359759 GUCD1Q96NT3 240 aa13.95□□□□□ -0.18
COL18A1-203ENST00000359759 CDX2Q99626 313 aaPredicted RBP13.95□□□□□ -0.18
COL18A1-203ENST00000359759 HEXA-AS1Q9H8Q6 139 aa13.95□□□□□ -0.18
COL18A1-203ENST00000359759 DLX6P56179 175 aa13.95□□□□□ -0.18
COL18A1-203ENST00000359759 TRIP6Q15654 476 aaKnown RBP13.95□□□□□ -0.18
COL18A1-203ENST00000359759 NRIP2Q9BQI9 281 aa13.95□□□□□ -0.18
COL18A1-203ENST00000359759 IGHV1OR15-9A0A0B4J2B8 117 aa13.94□□□□□ -0.18
COL18A1-203ENST00000359759 OR10S1Q8NGN2 331 aa13.94□□□□□ -0.18
COL18A1-203ENST00000359759 RNF133Q8WVZ7 376 aa13.94□□□□□ -0.18
COL18A1-203ENST00000359759 GPHA2Q96T91 129 aa13.94□□□□□ -0.18
COL18A1-203ENST00000359759 WBP1LQ9NX94 342 aa13.94□□□□□ -0.18
COL18A1-203ENST00000359759 MYO5AQ9Y4I1 1855 aaKnown RBP13.94□□□□□ -0.18
COL18A1-203ENST00000359759 FAM181BA6NEQ2 426 aa13.94□□□□□ -0.18
COL18A1-203ENST00000359759 H3BTX0 84 aa13.94□□□□□ -0.18
COL18A1-203ENST00000359759 J3QT63 122 aa13.94□□□□□ -0.18
COL18A1-203ENST00000359759 FCGR3AP08637 254 aa13.94□□□□□ -0.18
COL18A1-203ENST00000359759 OR4C45A6NMZ5 311 aa13.94□□□□□ -0.18
COL18A1-203ENST00000359759 NAT2P11245 290 aa13.94□□□□□ -0.18
COL18A1-203ENST00000359759 NUP37Q8NFH4 326 aa13.94□□□□□ -0.18
COL18A1-203ENST00000359759 ZNF418Q8TF45 676 aaPredicted RBP13.94□□□□□ -0.18
COL18A1-203ENST00000359759 LEPROTL1O95214 131 aa13.94□□□□□ -0.18
COL18A1-203ENST00000359759 CDS2O95674 445 aa13.94□□□□□ -0.18
COL18A1-203ENST00000359759 MEIG1Q5JSS6 88 aa13.94□□□□□ -0.18
COL18A1-203ENST00000359759 LINC00469Q8N7U9 141 aa13.94□□□□□ -0.18
COL18A1-203ENST00000359759 TOGARAM1Q9Y4F4 1720 aa13.94□□□□□ -0.18
COL18A1-203ENST00000359759 BGLAPP02818 100 aa13.94□□□□□ -0.18
COL18A1-203ENST00000359759 PLCH1Q4KWH8 1693 aa13.94□□□□□ -0.18
COL18A1-203ENST00000359759 A0A1B0GV90 55 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 PGPA6NDG6 321 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 LIMS2Q7Z4I7 341 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 HOGA1Q86XE5 327 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 C10orf35Q96D05 121 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 WDR34Q96EX3 536 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 WNT5BQ9H1J7 359 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 A8MWL6 223 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 ZIC3O60481 467 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 MRAP2Q96G30 205 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 CCL13Q99616 98 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 RBFOX2O43251 390 aaKnown RBP eCLIP13.93□□□□□ -0.183e-7■■■■□ 22.3
COL18A1-203ENST00000359759 RBM11P57052 281 aaKnown RBP13.93□□□□□ -0.18
COL18A1-203ENST00000359759 ZNF345Q14585 488 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 NPVFQ9HCQ7 196 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 ST6GALNAC2Q9UJ37 374 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 CCL4P13236 92 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 FOXL2P58012 376 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 ST6GALNAC3Q8NDV1 305 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 METTL1Q9UBP6 276 aaKnown RBP13.93□□□□□ -0.18
COL18A1-203ENST00000359759 CDC42EP3Q9UKI2 254 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 GRIFINA4D1Z8 144 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 CISD3P0C7P0 127 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 PRDX2P32119 198 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 SH3BGRL3Q9H299 93 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 MAP1LC3AQ9H492 121 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 TBX21Q9UL17 535 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 WIPI2Q9Y4P8 454 aa13.93□□□□□ -0.18
COL18A1-203ENST00000359759 REG1AP05451 166 aa13.92□□□□□ -0.18
COL18A1-203ENST00000359759 LINC00869P0C866 280 aa13.92□□□□□ -0.18
COL18A1-203ENST00000359759 MIC13Q5XKP0 118 aa13.92□□□□□ -0.18
COL18A1-203ENST00000359759 OR13C6PQ8NH95 151 aa13.92□□□□□ -0.18
COL18A1-203ENST00000359759 DDA1Q9BW61 102 aa13.92□□□□□ -0.18
COL18A1-203ENST00000359759 SF3B5Q9BWJ5 86 aaKnown RBP13.92□□□□□ -0.18
COL18A1-203ENST00000359759 H0YL77 283 aa13.92□□□□□ -0.18
COL18A1-203ENST00000359759 SLC25A17O43808 307 aa13.92□□□□□ -0.18
COL18A1-203ENST00000359759 PRSS23O95084 383 aa13.92□□□□□ -0.18
COL18A1-203ENST00000359759 SCTP09683 121 aa13.92□□□□□ -0.18
COL18A1-203ENST00000359759 NPBWR2P48146 333 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms