RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 UBAC2Q8NBM4 344 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 RELL2Q8NC24 303 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-202ENST00000359366 OR5A2Q8NGI9 324 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 PCNPQ8WW12 178 aaKnown RBP4.31□□□□□ -1.72
ATXN3-202ENST00000359366 CLUHP3Q96NS8 147 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 SEC11CQ9BY50 192 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 OR51I2Q9H344 312 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 C5orf66Q9H5L9 145 aa4.31□□□□□ -1.72
ATXN3-202ENST00000359366 NOP16Q9Y3C1 178 aaKnown RBP4.31□□□□□ -1.72
ATXN3-202ENST00000359366 USF3Q68DE3 2245 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 CSMD1Q96PZ7 3565 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 TRGV8A0A0C4DH27 118 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 TEX13DA0A0J9YY54 714 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-202ENST00000359366 COLCA2A8K830 154 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 HMSDA8MTL9 139 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 SCGNO76038 276 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 NBEAP1P0C6P0 100 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 PGAM2P15259 253 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 FUT3P21217 361 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 EPHA1P21709 976 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 CEACAM8P31997 349 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-202ENST00000359366 NAAAQ02083 359 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 ATXN7L3Q14CW9 347 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-202ENST00000359366 P2RY6Q15077 328 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 OR8G2PQ6IF36 304 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 FAM53AQ6NSI3 398 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-202ENST00000359366 TMEM88Q6PEY1 159 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 CLEC9AQ6UXN8 241 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 WFDC8Q8IUA0 241 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 MKXQ8IYA7 352 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 ZCCHC24Q8N2G6 241 aaKnown RBP4.3□□□□□ -1.72
ATXN3-202ENST00000359366 OR2AK2Q8NG84 335 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 OR2Z1Q8NG97 314 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 OR5AP2Q8NGF4 316 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 ASB13Q8WXK3 278 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 TMEM230Q96A57 120 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 CPNE2Q96FN4 548 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-202ENST00000359366 GPN1Q9HCN4 374 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-202ENST00000359366 DSCAMO60469 2012 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 TRAV24A0A0B4J272 114 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 C13orf42A0A1B0GVH6 325 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 CXorf65A6NEN9 183 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 PRAF2O60831 178 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 ADAP1O75689 374 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 IGLV1-44P01699 117 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 IL5P05113 134 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 CRYGCP07315 174 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 SCTP09683 121 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 NPSP0C0P6 89 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 OR5H8P0DN80 308 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 GRNP28799 593 aaKnown RBP4.3□□□□□ -1.72
ATXN3-202ENST00000359366 TIMP3P35625 211 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 FGF12P61328 243 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 IL13RA1P78552 427 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 CDSNQ15517 529 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 ATP6V1FQ16864 119 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 SP6Q3SY56 376 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 PHLDA2Q53GA4 152 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 LY6G6FQ5SQ64 297 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 FAM201AQ5SY85 155 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 SSX7Q7RTT5 188 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 ZNF573Q86YE8 665 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 TGIF2LYQ8IUE0 185 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 FAM58AQ8N1B3 248 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 TPRX1Q8N7U7 411 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 SUMF2Q8NBJ7 301 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 BPIFCQ8NFQ6 507 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 OR11L1Q8NGX0 322 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 COQ8AQ8NI60 647 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 PHYHIPLQ96FC7 376 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 SLC25A21Q9BQT8 299 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-202ENST00000359366 RTBDNQ9BSG5 229 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-202ENST00000359366 RTL8AQ9BWD3 113 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 OPN4Q9UHM6 478 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 NAGKQ9UJ70 344 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 ANXA10Q9UJ72 324 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 ANAPC10Q9UM13 185 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 MPC1Q9Y5U8 109 aa4.3□□□□□ -1.72
ATXN3-202ENST00000359366 USP9XQ93008 2570 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-202ENST00000359366 IGHV3OR15-7A0A075B7D8 119 aa4.29□□□□□ -1.72
ATXN3-202ENST00000359366 FXYD6-FXYD2A0A087WZ82 144 aa4.29□□□□□ -1.72
ATXN3-202ENST00000359366 SPRY3O43610 288 aa4.29□□□□□ -1.72
ATXN3-202ENST00000359366 IFNA21P01568 189 aa4.29□□□□□ -1.72
ATXN3-202ENST00000359366 ZBTB25P24278 435 aa4.29□□□□□ -1.72
ATXN3-202ENST00000359366 CD34P28906 385 aa4.29□□□□□ -1.72
ATXN3-202ENST00000359366 GCH1P30793 250 aa4.29□□□□□ -1.72
ATXN3-202ENST00000359366 FCGR2CP31995 323 aa4.29□□□□□ -1.72
ATXN3-202ENST00000359366 PPT1P50897 306 aa4.29□□□□□ -1.72
ATXN3-202ENST00000359366 SEC61A1P61619 476 aaKnown RBP4.29□□□□□ -1.72
ATXN3-202ENST00000359366 SUPT4H1P63272 117 aaKnown RBP4.29□□□□□ -1.72
ATXN3-202ENST00000359366 ANKRD55Q3KP44 614 aa4.29□□□□□ -1.72
ATXN3-202ENST00000359366 SLC25A42Q86VD7 318 aa4.29□□□□□ -1.72
ATXN3-202ENST00000359366 CBLN2Q8IUK8 224 aa4.29□□□□□ -1.72
ATXN3-202ENST00000359366 C1orf162Q8NEQ5 155 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-202ENST00000359366 OR52M1Q8NGK5 317 aa4.29□□□□□ -1.72
ATXN3-202ENST00000359366 MUCL1Q96DR8 90 aa4.29□□□□□ -1.72
ATXN3-202ENST00000359366 SPG11Q96JI7 2443 aa4.29□□□□□ -1.72
ATXN3-202ENST00000359366 PACRGQ96M98 296 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-202ENST00000359366 TECTBQ96PL2 329 aa4.29□□□□□ -1.72
ATXN3-202ENST00000359366 PHB2Q99623 299 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms