RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 CD300CQ08708 224 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 TMEM155Q4W5P6 130 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 PHLDA2Q53GA4 152 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 AVPI1Q5T686 147 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 COQ8AQ8NI60 647 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 MITD1Q8WV92 249 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 IGFBPL1Q8WX77 278 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 H1FXQ92522 213 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 CORO2AQ92828 525 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 SMR3AQ99954 134 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 TOLLIPQ9H0E2 274 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 NAA60Q9H7X0 242 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 RANGRFQ9HD47 186 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 SLC2A9Q9NRM0 540 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 CTSZQ9UBR2 303 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 SHPKQ9UHJ6 478 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 UBE2J1Q9Y385 318 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 RBM7Q9Y580 266 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 LINC00312Q9Y6C7 94 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 F2RL2O00254 374 aa11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 DVL1O14640 695 aa11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 RGS11O94810 467 aa11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 IFNA2P01563 188 aa11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 RPS2P15880 293 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 SLC9A3R2Q15599 337 aa11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 NLRC3Q7RTR2 1065 aa11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 CMTM1Q8IZ96 169 aa11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 TCTE3Q8IZS6 198 aa11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 UXS1Q8NBZ7 420 aa11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 OR52L2PQ8NGH6 319 aa11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 RFESDQ8TAC1 157 aa11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 FAM216AQ8WUB2 273 aa11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 RTN4IP1Q8WWV3 396 aaPredicted RBP11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 GAL3ST2Q9H3Q3 398 aa11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 BARX1Q9HBU1 254 aaPredicted RBP11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 OR2S2Q9NQN1 319 aa11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 TAS2R3Q9NYW6 316 aa11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 GNG12Q9UBI6 72 aa11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 MIOXQ9UGB7 285 aa11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 KCNS2Q9ULS6 477 aa11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 KCNIP3Q9Y2W7 256 aa11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 FN1P02751 2386 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-203ENST00000359265 KBTBD11-OT1A0A1B0GTJ5 212 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 MEX3AA1L020 520 aaKnown RBP11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 GOSR2O14653 212 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 HSD17B6O14756 317 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 SLC22A5O76082 557 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 CGB3P0DN86 165 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 CGB7P0DN87 165 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 CXCL3P19876 107 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 GNRHRP30968 328 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 TMEM33P57088 247 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 RPL31P62899 125 aaKnown RBP11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 SUPT4H1P63272 117 aaKnown RBP11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 GNMTQ14749 295 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 LTC4SQ16873 150 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 C17orf58Q2M2W7 97 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 TCF23Q7RTU1 214 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 FGFRL1Q8N441 504 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 OR8B3Q8NGG8 313 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 EDARADDQ8WWZ3 215 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 NRGNQ92686 78 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 NEIL1Q96FI4 390 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 GALNT14Q96FL9 552 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 AKR1E2Q96JD6 320 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 OR8B2Q96RD0 313 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 SUCNR1Q9BXA5 334 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 ZNF436Q9C0F3 470 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 CCL28Q9NRJ3 127 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 C19orf12Q9NSK7 152 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 IDI2-AS1Q9NZ38 188 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 CLN8Q9UBY8 286 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 COL6A5A8TX70 2615 aa11.44□□□□□ -0.58
PDLIM5-203ENST00000359265 TRBV23-1A0A0A0MS06 115 aa11.43□□□□□ -0.58
PDLIM5-203ENST00000359265 IGHV3-43A0A0B4J1X8 118 aa11.43□□□□□ -0.58
PDLIM5-203ENST00000359265 GPR37O15354 613 aa11.43□□□□□ -0.58
PDLIM5-203ENST00000359265 YPEL1O60688 119 aa11.43□□□□□ -0.58
PDLIM5-203ENST00000359265 GIPP09681 153 aaPredicted RBP11.43□□□□□ -0.58
PDLIM5-203ENST00000359265 OR8U9P0C7N5 309 aa11.43□□□□□ -0.58
PDLIM5-203ENST00000359265 IGHV3-43DP0DP04 118 aa11.43□□□□□ -0.58
PDLIM5-203ENST00000359265 PPP1CCP36873 323 aaKnown RBP11.43□□□□□ -0.58
PDLIM5-203ENST00000359265 GPR6P46095 362 aaPredicted RBP11.43□□□□□ -0.58
PDLIM5-203ENST00000359265 MSMO1Q15800 293 aa11.43□□□□□ -0.58
PDLIM5-203ENST00000359265 ZFP69Q49AA0 526 aa11.43□□□□□ -0.58
PDLIM5-203ENST00000359265 LIN54Q6MZP7 749 aa11.43□□□□□ -0.58
PDLIM5-203ENST00000359265 ZNF818PQ6ZRF7 136 aa11.43□□□□□ -0.58
PDLIM5-203ENST00000359265 BVESQ8NE79 360 aa11.43□□□□□ -0.58
PDLIM5-203ENST00000359265 OR10A7Q8NGE5 316 aa11.43□□□□□ -0.58
PDLIM5-203ENST00000359265 OR8U1Q8NH10 309 aa11.43□□□□□ -0.58
PDLIM5-203ENST00000359265 ASB13Q8WXK3 278 aa11.43□□□□□ -0.58
PDLIM5-203ENST00000359265 ZNF714Q96N38 554 aa11.43□□□□□ -0.58
PDLIM5-203ENST00000359265 YPEL2Q96QA6 119 aa11.43□□□□□ -0.58
PDLIM5-203ENST00000359265 FYTTD1Q96QD9 318 aaKnown RBP11.43□□□□□ -0.58
PDLIM5-203ENST00000359265 PARP12Q9H0J9 701 aaKnown RBP11.43□□□□□ -0.58
PDLIM5-203ENST00000359265 MPPED1O15442 326 aa11.42□□□□□ -0.58
PDLIM5-203ENST00000359265 NDUFS7O75251 213 aa11.42□□□□□ -0.58
PDLIM5-203ENST00000359265 FCN3O75636 299 aa11.42□□□□□ -0.58
PDLIM5-203ENST00000359265 OR5AC1P0C628 307 aa11.42□□□□□ -0.58
PDLIM5-203ENST00000359265 PAX1P15863 534 aa11.42□□□□□ -0.58
PDLIM5-203ENST00000359265 EIF2B2P49770 351 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms