RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 ODF3BA8MYP8 253 aa12.09□□□□□ -0.47
CCNE1-202ENST00000357943 J3QR06 171 aa12.09□□□□□ -0.47
CCNE1-202ENST00000357943 IGLV1-47P01700 117 aa12.09□□□□□ -0.47
CCNE1-202ENST00000357943 PMP2P02689 132 aa12.09□□□□□ -0.47
CCNE1-202ENST00000357943 ARG1P05089 322 aa12.09□□□□□ -0.47
CCNE1-202ENST00000357943 HRH1P35367 487 aa12.09□□□□□ -0.47
CCNE1-202ENST00000357943 LDLRAD2Q5SZI1 272 aa12.09□□□□□ -0.47
CCNE1-202ENST00000357943 ZNF626Q68DY1 528 aa12.09□□□□□ -0.47
CCNE1-202ENST00000357943 ZNF439Q8NDP4 499 aa12.09□□□□□ -0.47
CCNE1-202ENST00000357943 OR9G1Q8NH87 305 aa12.09□□□□□ -0.47
CCNE1-202ENST00000357943 TRIM63Q969Q1 353 aa12.09□□□□□ -0.47
CCNE1-202ENST00000357943 GINS4Q9BRT9 223 aa12.09□□□□□ -0.47
CCNE1-202ENST00000357943 RDH8Q9NYR8 311 aa12.09□□□□□ -0.47
CCNE1-202ENST00000357943 NUP50Q9UKX7 468 aa12.09□□□□□ -0.47
CCNE1-202ENST00000357943 SOX21Q9Y651 276 aaPredicted RBP12.09□□□□□ -0.47
CCNE1-202ENST00000357943 MTORP42345 2549 aa12.09□□□□□ -0.47
CCNE1-202ENST00000357943 NPFFO15130 113 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 DIRAS3O95661 229 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 CD3DP04234 171 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 CTXN2P0C2S0 81 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 NFYAP23511 347 aaPredicted RBP12.08□□□□□ -0.48
CCNE1-202ENST00000357943 CT45A1Q5HYN5 189 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 OVCH2Q7RTZ1 564 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 OR4P4Q8NGL7 312 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 CT45A3Q8NHU0 189 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 CHPT1Q8WUD6 406 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 C22orf15Q8WYQ4 148 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 NECAP2Q9NVZ3 263 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 NSD1Q96L73 2696 aaPredicted RBP12.08□□□□□ -0.48
CCNE1-202ENST00000357943 TEP1Q99973 2627 aaKnown RBP12.08□□□□□ -0.48
CCNE1-202ENST00000357943 ZNF736B4DX44 427 aaPredicted RBP12.08□□□□□ -0.48
CCNE1-202ENST00000357943 TOR1AO14656 332 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 OR5H8P0DN80 308 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 HNF1AP20823 631 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 SAA4P35542 130 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 SRP14P37108 136 aaKnown RBP12.08□□□□□ -0.48
CCNE1-202ENST00000357943 OR3A3P47888 321 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 TAS2R46P59540 309 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 SSBP1Q04837 148 aaKnown RBP12.08□□□□□ -0.48
CCNE1-202ENST00000357943 CDK10Q15131 360 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 HLA-DRB5Q30154 266 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 Q3ZCU0 254 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 SLC25A48Q6ZT89 311 aaKnown RBP12.08□□□□□ -0.48
CCNE1-202ENST00000357943 LHFPL4Q7Z7J7 247 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 BEND2Q8NDZ0 799 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 OR5H2Q8NGV7 314 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 C17orf50Q8WW18 174 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 ABHD14AQ9BUJ0 271 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 BEX2Q9BXY8 128 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 MMP28Q9H239 520 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 EHFQ9NZC4 300 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 ZNF69Q9UC07 566 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 TBC1D24Q9ULP9 559 aa12.08□□□□□ -0.48
CCNE1-202ENST00000357943 M0QYG6 137 aa12.07□□□□□ -0.48
CCNE1-202ENST00000357943 ST8SIA5O15466 376 aa12.07□□□□□ -0.48
CCNE1-202ENST00000357943 RGS11O94810 467 aa12.07□□□□□ -0.48
CCNE1-202ENST00000357943 PAX6P26367 422 aa12.07□□□□□ -0.48
CCNE1-202ENST00000357943 PRRX1P54821 245 aa12.07□□□□□ -0.48
CCNE1-202ENST00000357943 TAS2R19P59542 299 aa12.07□□□□□ -0.48
CCNE1-202ENST00000357943 OXA1LQ15070 435 aa12.07□□□□□ -0.48
CCNE1-202ENST00000357943 TRIQKQ629K1 86 aa12.07□□□□□ -0.48
CCNE1-202ENST00000357943 Q6ZNX1 250 aa12.07□□□□□ -0.48
CCNE1-202ENST00000357943 H1FOOQ8IZA3 346 aaPredicted RBP12.07□□□□□ -0.48
CCNE1-202ENST00000357943 BCL6BQ8N143 479 aaPredicted RBP12.07□□□□□ -0.48
CCNE1-202ENST00000357943 CENPSQ8N2Z9 138 aa12.07□□□□□ -0.48
CCNE1-202ENST00000357943 TEX29Q8N6K0 151 aa12.07□□□□□ -0.48
CCNE1-202ENST00000357943 POC5Q8NA72 575 aa12.07□□□□□ -0.48
CCNE1-202ENST00000357943 TMEM229BQ8NBD8 167 aa12.07□□□□□ -0.48
CCNE1-202ENST00000357943 OR2AK2Q8NG84 335 aa12.07□□□□□ -0.48
CCNE1-202ENST00000357943 OR4D10Q8NGI6 311 aa12.07□□□□□ -0.48
CCNE1-202ENST00000357943 ZNF596Q8TC21 504 aa12.07□□□□□ -0.48
CCNE1-202ENST00000357943 TINAGL1Q9GZM7 467 aaPredicted RBP12.07□□□□□ -0.48
CCNE1-202ENST00000357943 TOLLIPQ9H0E2 274 aa12.07□□□□□ -0.48
CCNE1-202ENST00000357943 C11orf54Q9H0W9 315 aaPredicted RBP12.07□□□□□ -0.48
CCNE1-202ENST00000357943 CDC42EP3Q9UKI2 254 aa12.07□□□□□ -0.48
CCNE1-202ENST00000357943 ANKRD20A5PA0PJZ0 165 aa12.06□□□□□ -0.48
CCNE1-202ENST00000357943 BUB1B-PAK6H3BSN5 160 aa12.06□□□□□ -0.48
CCNE1-202ENST00000357943 CSF1P09603 554 aa12.06□□□□□ -0.48
CCNE1-202ENST00000357943 LGALS4P56470 323 aa12.06□□□□□ -0.48
CCNE1-202ENST00000357943 DEFA1P59665 94 aa12.06□□□□□ -0.48
CCNE1-202ENST00000357943 DEFA3P59666 94 aa12.06□□□□□ -0.48
CCNE1-202ENST00000357943 DYRK1AQ13627 763 aa12.06□□□□□ -0.48
CCNE1-202ENST00000357943 MIDNQ504T8 468 aa12.06□□□□□ -0.48
CCNE1-202ENST00000357943 LY6G6FQ5SQ64 297 aa12.06□□□□□ -0.48
CCNE1-202ENST00000357943 FAAP20Q6NZ36 180 aa12.06□□□□□ -0.48
CCNE1-202ENST00000357943 STEAP1BQ6NZ63 245 aa12.06□□□□□ -0.48
CCNE1-202ENST00000357943 LINC00311Q8N616 119 aa12.06□□□□□ -0.48
CCNE1-202ENST00000357943 C8orf31Q8N9H6 132 aa12.06□□□□□ -0.48
CCNE1-202ENST00000357943 OR10X1Q8NGY0 326 aa12.06□□□□□ -0.48
CCNE1-202ENST00000357943 AJUBAQ96IF1 538 aa12.06□□□□□ -0.48
CCNE1-202ENST00000357943 AGMATQ9BSE5 352 aa12.06□□□□□ -0.48
CCNE1-202ENST00000357943 MS4A7Q9GZW8 240 aaPredicted RBP12.06□□□□□ -0.48
CCNE1-202ENST00000357943 TAS2R8Q9NYW2 309 aa12.06□□□□□ -0.48
CCNE1-202ENST00000357943 ZNF107Q9UII5 783 aaPredicted RBP12.06□□□□□ -0.48
CCNE1-202ENST00000357943 FN1P02751 2386 aaKnown RBP12.06□□□□□ -0.48
CCNE1-202ENST00000357943 A0A0U1RQK1 487 aa12.05□□□□□ -0.48
CCNE1-202ENST00000357943 CD74P04233 296 aa12.05□□□□□ -0.48
CCNE1-202ENST00000357943 EPHA1P21709 976 aa12.05□□□□□ -0.48
CCNE1-202ENST00000357943 HTR1DP28221 377 aa12.05□□□□□ -0.48
CCNE1-202ENST00000357943 FCGR2CP31995 323 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms