RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 OR51G1Q8NGK1 321 aa8.62□□□□□ -1.03
PTPRA-203ENST00000356147 PSMF1Q92530 271 aa8.62□□□□□ -1.03
PTPRA-203ENST00000356147 CLDN23Q96B33 292 aa8.62□□□□□ -1.03
PTPRA-203ENST00000356147 ADGRG7Q96K78 797 aa8.62□□□□□ -1.03
PTPRA-203ENST00000356147 TMEM204Q9BSN7 226 aa8.62□□□□□ -1.03
PTPRA-203ENST00000356147 ATP23Q9Y6H3 246 aa8.62□□□□□ -1.03
PTPRA-203ENST00000356147 NCKAP5O14513 1909 aa8.62□□□□□ -1.03
PTPRA-203ENST00000356147 SCGB1D1O95968 90 aa8.61□□□□□ -1.03
PTPRA-203ENST00000356147 UMODP07911 640 aa8.61□□□□□ -1.03
PTPRA-203ENST00000356147 CCL4P13236 92 aa8.61□□□□□ -1.03
PTPRA-203ENST00000356147 NUBP1P53384 320 aa8.61□□□□□ -1.03
PTPRA-203ENST00000356147 CLDN15P56746 228 aa8.61□□□□□ -1.03
PTPRA-203ENST00000356147 UBE2G2P60604 165 aa8.61□□□□□ -1.03
PTPRA-203ENST00000356147 MRPL21Q7Z2W9 205 aaKnown RBP8.61□□□□□ -1.03
PTPRA-203ENST00000356147 MRPL30Q8TCC3 161 aaKnown RBP8.61□□□□□ -1.03
PTPRA-203ENST00000356147 OR5P3Q8WZ94 311 aa8.61□□□□□ -1.03
PTPRA-203ENST00000356147 SRD5A3Q9H8P0 318 aa8.61□□□□□ -1.03
PTPRA-203ENST00000356147 GPR35Q9HC97 309 aa8.61□□□□□ -1.03
PTPRA-203ENST00000356147 IL36GQ9NZH8 169 aa8.61□□□□□ -1.03
PTPRA-203ENST00000356147 TCFL5Q9UL49 500 aa8.61□□□□□ -1.03
PTPRA-203ENST00000356147 SIRPB1O00241 398 aa8.61□□□□□ -1.03
PTPRA-203ENST00000356147 KRASP01116 189 aa8.61□□□□□ -1.03
PTPRA-203ENST00000356147 RAC3P60763 192 aa8.61□□□□□ -1.03
PTPRA-203ENST00000356147 FGF12P61328 243 aa8.61□□□□□ -1.03
PTPRA-203ENST00000356147 MEF2BQ02080 365 aaPredicted RBP8.61□□□□□ -1.03
PTPRA-203ENST00000356147 TEX38Q6PEX7 206 aa8.61□□□□□ -1.03
PTPRA-203ENST00000356147 FIP1L1Q6UN15 594 aaKnown RBP8.61□□□□□ -1.03
PTPRA-203ENST00000356147 MRGPRGQ86SM5 289 aa8.61□□□□□ -1.03
PTPRA-203ENST00000356147 MKXQ8IYA7 352 aa8.61□□□□□ -1.03
PTPRA-203ENST00000356147 OR5B12Q96R08 314 aa8.61□□□□□ -1.03
PTPRA-203ENST00000356147 CLN8Q9UBY8 286 aa8.61□□□□□ -1.03
PTPRA-203ENST00000356147 OR2W1Q9Y3N9 320 aa8.61□□□□□ -1.03
PTPRA-203ENST00000356147 CLEC18AA5D8T8 446 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 NUPR1O60356 82 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 ARF1P84077 181 aaKnown RBP8.6□□□□□ -1.03
PTPRA-203ENST00000356147 CST9LP1Q5W188 147 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 ZNF324BQ6AW86 544 aaPredicted RBP8.6□□□□□ -1.03
PTPRA-203ENST00000356147 GGNQ86UU5 652 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 TMEM256Q8N2U0 113 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 CLEC18CQ8NCF0 446 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 OR5R1Q8NH85 324 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 CPT1CQ8TCG5 803 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 WDR61Q9GZS3 305 aaKnown RBP8.6□□□□□ -1.03
PTPRA-203ENST00000356147 NAT8Q9UHE5 227 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 IGHV1-45A0A0A0MS14 117 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 TRAV1-1A0A0B4J248 108 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 TRAV24A0A0B4J272 114 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 KIR2DS1A0A191URI9 304 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 PAGE4O60829 102 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 KIR2DS4P43632 304 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 PAX5Q02548 391 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 SLC38A11Q08AI6 406 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 KIR2DS1Q14954 304 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 LRRC75BQ2VPJ9 315 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 ZNF808Q8N4W9 903 aaPredicted RBP8.6□□□□□ -1.03
PTPRA-203ENST00000356147 TAF15Q92804 592 aaKnown RBP eCLIP8.6□□□□□ -1.03
PTPRA-203ENST00000356147 RAB40CQ96S21 281 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 C2orf88Q9BSF0 95 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 NDUFAF3Q9BU61 184 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 SNHG12Q9BXW3 62 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 ADAMTS20P59510 1910 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 DVL1O14640 695 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 RAMP3O60896 148 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 TFF3Q07654 80 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 ZNF816Q0VGE8 651 aaPredicted RBP8.6□□□□□ -1.03
PTPRA-203ENST00000356147 FOXO1Q12778 655 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 SLC10A1Q14973 349 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 ZNF585BQ52M93 769 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 TMEM41BQ5BJD5 291 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 FAM78BQ5VT40 261 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 MRPL14Q6P1L8 145 aaKnown RBP8.6□□□□□ -1.03
PTPRA-203ENST00000356147 TCF23Q7RTU1 214 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 CARFQ8N187 725 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 MBD3L1Q8WWY6 194 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 DERL1Q9BUN8 251 aa8.6□□□□□ -1.03
PTPRA-203ENST00000356147 LOC400499M0QZD8 3231 aa8.59□□□□□ -1.03
PTPRA-203ENST00000356147 A6NNC1 897 aa8.59□□□□□ -1.03
PTPRA-203ENST00000356147 CBR3O75828 277 aa8.59□□□□□ -1.03
PTPRA-203ENST00000356147 IGLV2-14P01704 120 aa8.59□□□□□ -1.03
PTPRA-203ENST00000356147 TFF1P04155 84 aa8.59□□□□□ -1.03
PTPRA-203ENST00000356147 COX6A1P12074 109 aa8.59□□□□□ -1.03
PTPRA-203ENST00000356147 B3GALT5-AS1P59052 145 aa8.59□□□□□ -1.03
PTPRA-203ENST00000356147 GCSAMLQ5JQS6 135 aa8.59□□□□□ -1.03
PTPRA-203ENST00000356147 ZDHHC16Q969W1 377 aa8.59□□□□□ -1.03
PTPRA-203ENST00000356147 TMEM242Q9NWH2 141 aa8.59□□□□□ -1.03
PTPRA-203ENST00000356147 GRIFINA4D1Z8 144 aa8.59□□□□□ -1.03
PTPRA-203ENST00000356147 PINLYPA6NC86 204 aa8.59□□□□□ -1.03
PTPRA-203ENST00000356147 GYPAP02724 150 aa8.59□□□□□ -1.03
PTPRA-203ENST00000356147 G6PCP35575 357 aa8.59□□□□□ -1.03
PTPRA-203ENST00000356147 RPL29P47914 159 aaKnown RBP8.59□□□□□ -1.03
PTPRA-203ENST00000356147 CEBPDP49716 269 aaPredicted RBP8.59□□□□□ -1.03
PTPRA-203ENST00000356147 COL19A1Q14993 1142 aa8.59□□□□□ -1.03
PTPRA-203ENST00000356147 ABLIM2Q6H8Q1 611 aa8.59□□□□□ -1.03
PTPRA-203ENST00000356147 BTNL3Q6UXE8 466 aa8.59□□□□□ -1.03
PTPRA-203ENST00000356147 DPPA3Q6W0C5 159 aa8.59□□□□□ -1.03
PTPRA-203ENST00000356147 CYP2G1PQ6ZSU1 146 aa8.59□□□□□ -1.03
PTPRA-203ENST00000356147 CADM4Q8NFZ8 388 aa8.59□□□□□ -1.03
PTPRA-203ENST00000356147 OR10G4Q8NGN3 311 aa8.59□□□□□ -1.03
PTPRA-203ENST00000356147 RAB24Q969Q5 203 aa8.59□□□□□ -1.03
PTPRA-203ENST00000356147 PRDM6Q9NQX0 595 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms