RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 ZNF221Q9UK13 617 aa5.76□□□□□ -1.49
VPS13A-201ENST00000355766 CMYA5Q8N3K9 4069 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 TRAV6A0A075B6T7 132 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 ZSCAN5BA6NJL1 495 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 LRRC30A6NM36 301 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 B9A039 149 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 M0R233 179 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 CDIPTO14735 213 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 ARPC1BO15143 372 aaKnown RBP5.75□□□□□ -1.49
VPS13A-201ENST00000355766 TK1P04183 234 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 WNT2P09544 360 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 HLA-GP17693 338 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 GLP1RP43220 463 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 ZNF81P51508 661 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 DHODHQ02127 395 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 MSMO1Q15800 293 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 TMEM128Q5BJH2 165 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 ATPAF1Q5TC12 328 aaPredicted RBP5.75□□□□□ -1.49
VPS13A-201ENST00000355766 ZNF660Q6AZW8 331 aaPredicted RBP5.75□□□□□ -1.49
VPS13A-201ENST00000355766 SFRP4Q6FHJ7 346 aaPredicted RBP5.75□□□□□ -1.49
VPS13A-201ENST00000355766 Q6P435 159 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 ACP7Q6ZNF0 438 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 SLC25A42Q86VD7 318 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 C11orf53Q8IXP5 236 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 SUMF2Q8NBJ7 301 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 OR4S1Q8NGB4 309 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 OR4A4PQ8NGN8 299 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 OR13C8Q8NGS7 320 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 OR11L1Q8NGX0 322 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 ZNF431Q8TF32 576 aaPredicted RBP5.75□□□□□ -1.49
VPS13A-201ENST00000355766 SLC6A7Q99884 636 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 CABLES2Q9BTV7 478 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 C1QTNF6Q9BXI9 259 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 EGLN1Q9GZT9 426 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 FAM234AQ9H0X4 552 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 MS4A5Q9H3V2 200 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 Q9N2K0 584 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 ETAA1Q9NY74 926 aa5.75□□□□□ -1.49
VPS13A-201ENST00000355766 MEIKINA0A087WXM9 373 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 TRAV24A0A0B4J272 114 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 TMEM30CPA0ZSE6 113 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 MEIS3P1A6NDR6 274 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 A6NLC8 198 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 C17orf100A8MU93 164 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 B4DSR2 109 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 TRDCB7Z8K6 153 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 F5H5P2 479 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 M0QYG6 137 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 SLC33A1O00400 549 aaPredicted RBP5.74□□□□□ -1.49
VPS13A-201ENST00000355766 SSNA1O43805 119 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 RHBDL1O75783 438 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 DUS4LO95620 317 aaKnown RBP5.74□□□□□ -1.49
VPS13A-201ENST00000355766 OR2H2O95918 312 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 HAND1O96004 215 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 LHBP01229 141 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 RLN1P04808 185 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 CTSDP07339 412 aaPredicted RBP5.74□□□□□ -1.49
VPS13A-201ENST00000355766 GIPP09681 153 aaPredicted RBP5.74□□□□□ -1.49
VPS13A-201ENST00000355766 OR5H8P0DN80 308 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 HKR1P10072 659 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 MUC1P15941 1255 aaPredicted RBP5.74□□□□□ -1.49
VPS13A-201ENST00000355766 ERP29P30040 261 aaKnown RBP5.74□□□□□ -1.49
VPS13A-201ENST00000355766 SERPINF1P36955 418 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 PPOXP50336 477 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 RAP2BP61225 183 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 TSPAN5P62079 268 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 UBA52P62987 128 aaKnown RBP5.74□□□□□ -1.49
VPS13A-201ENST00000355766 SRPXP78539 464 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 MRPS11P82912 194 aaKnown RBP5.74□□□□□ -1.49
VPS13A-201ENST00000355766 ADIPOQQ15848 244 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 ALKBH6Q3KRA9 238 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 PAN3Q58A45 887 aaKnown RBP5.74□□□□□ -1.49
VPS13A-201ENST00000355766 ATAD3CQ5T2N8 411 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 C6orf183Q5T699 404 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 SLC35E4Q6ICL7 350 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 OR52W1Q6IF63 320 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 ZNF497Q6ZNH5 498 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 SLC36A1Q7Z2H8 476 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 SLC38A6Q8IZM9 456 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 C1orf87Q8N0U7 546 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 GVQW1Q8N7I0 195 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 DRAXINQ8NBI3 349 aaPredicted RBP5.74□□□□□ -1.49
VPS13A-201ENST00000355766 OR2Z1Q8NG97 314 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 MITD1Q8WV92 249 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 TMEM186Q96B77 213 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 MOB3AQ96BX8 217 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 ST6GAL2Q96JF0 529 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 OR2V2Q96R30 315 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 FAAP24Q9BTP7 215 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 ST6GALNAC5Q9BVH7 336 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 SUCNR1Q9BXA5 334 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 MRPL37Q9BZE1 423 aaKnown RBP5.74□□□□□ -1.49
VPS13A-201ENST00000355766 TOLLIPQ9H0E2 274 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 ESM1Q9NQ30 184 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 EHFQ9NZC4 300 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 TAAR3PQ9P1P4 343 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 ELF5Q9UKW6 265 aaPredicted RBP5.74□□□□□ -1.49
VPS13A-201ENST00000355766 GPR132Q9UNW8 380 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 WIPI2Q9Y4P8 454 aa5.74□□□□□ -1.49
VPS13A-201ENST00000355766 OR2AT4A6NND4 320 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms