RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 C19orf48Q6RUI8 117 aa15.6■□□□□ 0.09
COL18A1-202ENST00000355480 RFLNBQ8N5W9 214 aa15.6■□□□□ 0.09
COL18A1-202ENST00000355480 MYOZ3Q8TDC0 251 aa15.6■□□□□ 0.09
COL18A1-202ENST00000355480 APC2O95996 2303 aa15.6■□□□□ 0.09
COL18A1-202ENST00000355480 PTX4Q96A99 478 aa15.6■□□□□ 0.09
COL18A1-202ENST00000355480 ISLRO14498 428 aa15.6■□□□□ 0.09
COL18A1-202ENST00000355480 IGF2P01344 180 aa15.6■□□□□ 0.09
COL18A1-202ENST00000355480 NAT2P11245 290 aa15.6■□□□□ 0.09
COL18A1-202ENST00000355480 C16orf92Q96LL3 132 aa15.6■□□□□ 0.09
COL18A1-202ENST00000355480 TMEM204Q9BSN7 226 aa15.6■□□□□ 0.09
COL18A1-202ENST00000355480 AURKAIP1Q9NWT8 199 aaPredicted RBP15.6■□□□□ 0.09
COL18A1-202ENST00000355480 PRR19A6NJB7 356 aa15.59■□□□□ 0.09
COL18A1-202ENST00000355480 B4DEV8 164 aa15.59■□□□□ 0.09
COL18A1-202ENST00000355480 FAM74A3Q4VXF1 159 aa15.59■□□□□ 0.09
COL18A1-202ENST00000355480 SLC25A33Q9BSK2 321 aa15.59■□□□□ 0.09
COL18A1-202ENST00000355480 RNF115Q9Y4L5 304 aa15.59■□□□□ 0.09
COL18A1-202ENST00000355480 TM4SF20Q53R12 229 aa15.59■□□□□ 0.09
COL18A1-202ENST00000355480 HCP5Q6MZN7 132 aa15.59■□□□□ 0.09
COL18A1-202ENST00000355480 HSD17B13Q7Z5P4 300 aaPredicted RBP15.59■□□□□ 0.09
COL18A1-202ENST00000355480 MRPL30Q8TCC3 161 aaKnown RBP15.59■□□□□ 0.09
COL18A1-202ENST00000355480 SNX22Q96L94 193 aa15.59■□□□□ 0.09
COL18A1-202ENST00000355480 ZNF841Q6ZN19 808 aa15.59■□□□□ 0.09
COL18A1-202ENST00000355480 FAM216AQ8WUB2 273 aa15.59■□□□□ 0.09
COL18A1-202ENST00000355480 NPVFQ9HCQ7 196 aa15.59■□□□□ 0.09
COL18A1-202ENST00000355480 NUP214P35658 2090 aaPredicted RBP15.59■□□□□ 0.09
COL18A1-202ENST00000355480 SS18L1O75177 396 aaPredicted RBP15.59■□□□□ 0.09
COL18A1-202ENST00000355480 IER3P46695 156 aa15.59■□□□□ 0.09
COL18A1-202ENST00000355480 ATP5J2P56134 94 aa15.59■□□□□ 0.09
COL18A1-202ENST00000355480 RRN3P1Q2M238 152 aa15.59■□□□□ 0.09
COL18A1-202ENST00000355480 UNQ5815/PRO19632Q6UWF5 114 aa15.59■□□□□ 0.09
COL18A1-202ENST00000355480 OR11H7Q8NGC8 314 aa15.59■□□□□ 0.09
COL18A1-202ENST00000355480 CHAC2Q8WUX2 184 aa15.59■□□□□ 0.09
COL18A1-202ENST00000355480 METTL26Q96S19 204 aa15.59■□□□□ 0.09
COL18A1-202ENST00000355480 GPX7Q96SL4 187 aaPredicted RBP15.59■□□□□ 0.09
COL18A1-202ENST00000355480 CYB5R3P00387 301 aaPredicted RBP15.59■□□□□ 0.09
COL18A1-202ENST00000355480 SLC25A53Q5H9E4 307 aa15.59■□□□□ 0.09
COL18A1-202ENST00000355480 OR10J6PQ8NGY7 276 aa15.59■□□□□ 0.09
COL18A1-202ENST00000355480 ANGPTL6Q8NI99 470 aa15.59■□□□□ 0.09
COL18A1-202ENST00000355480 HIST1H1BP16401 226 aaKnown RBP15.58■□□□□ 0.09
COL18A1-202ENST00000355480 GFRA1P56159 465 aa15.58■□□□□ 0.09
COL18A1-202ENST00000355480 TMEM78Q5T7P6 136 aa15.58■□□□□ 0.09
COL18A1-202ENST00000355480 OR8A1Q8NGG7 326 aa15.58■□□□□ 0.09
COL18A1-202ENST00000355480 TRIP11Q15643 1979 aa15.58■□□□□ 0.09
COL18A1-202ENST00000355480 TMEM218A2RU14 115 aa15.58■□□□□ 0.08
COL18A1-202ENST00000355480 APCSP02743 223 aa15.58■□□□□ 0.08
COL18A1-202ENST00000355480 C1QCP02747 245 aa15.58■□□□□ 0.08
COL18A1-202ENST00000355480 ATP6V0CP27449 155 aa15.58■□□□□ 0.08
COL18A1-202ENST00000355480 CEBPDP49716 269 aaPredicted RBP15.58■□□□□ 0.08
COL18A1-202ENST00000355480 CLDN18P56856 261 aa15.58■□□□□ 0.08
COL18A1-202ENST00000355480 SRSF9Q13242 221 aaKnown RBP eCLIP15.58■□□□□ 0.086e-7■■□□□ 12.1
COL18A1-202ENST00000355480 ST6GAL2Q96JF0 529 aa15.58■□□□□ 0.08
COL18A1-202ENST00000355480 A0A1W2PS18 150 aa15.58■□□□□ 0.08
COL18A1-202ENST00000355480 CIDEAO60543 219 aa15.58■□□□□ 0.08
COL18A1-202ENST00000355480 ERGP11308 486 aa15.58■□□□□ 0.08
COL18A1-202ENST00000355480 OR10J1P30954 320 aa15.58■□□□□ 0.08
COL18A1-202ENST00000355480 OR8G5Q8NG78 346 aa15.58■□□□□ 0.08
COL18A1-202ENST00000355480 MRPS18AQ9NVS2 196 aaKnown RBP15.58■□□□□ 0.08
COL18A1-202ENST00000355480 IFNL4K9M1U5 179 aa15.58■□□□□ 0.08
COL18A1-202ENST00000355480 HAX1O00165 279 aa15.58■□□□□ 0.08
COL18A1-202ENST00000355480 COX6A1P12074 109 aa15.58■□□□□ 0.08
COL18A1-202ENST00000355480 IGHV3OR16-12A0A075B7B8 117 aa15.58■□□□□ 0.08
COL18A1-202ENST00000355480 FCARP24071 287 aa15.58■□□□□ 0.08
COL18A1-202ENST00000355480 EIF4EBP2Q13542 120 aaPredicted RBP15.58■□□□□ 0.08
COL18A1-202ENST00000355480 SLC25A47Q6Q0C1 308 aa15.58■□□□□ 0.08
COL18A1-202ENST00000355480 SCNM1Q9BWG6 230 aa15.58■□□□□ 0.08
COL18A1-202ENST00000355480 PRDM6Q9NQX0 595 aa15.58■□□□□ 0.08
COL18A1-202ENST00000355480 FUT9Q9Y231 359 aa15.58■□□□□ 0.08
COL18A1-202ENST00000355480 PCM1Q15154 2024 aa15.57■□□□□ 0.08
COL18A1-202ENST00000355480 SNURFLB1AK76 121 aa15.57■□□□□ 0.08
COL18A1-202ENST00000355480 PITX3O75364 302 aa15.57■□□□□ 0.08
COL18A1-202ENST00000355480 SIRT4Q9Y6E7 314 aaPredicted RBP15.57■□□□□ 0.08
COL18A1-202ENST00000355480 NDUFA2O43678 99 aa15.57■□□□□ 0.08
COL18A1-202ENST00000355480 SCTP09683 121 aa15.57■□□□□ 0.08
COL18A1-202ENST00000355480 ZNF645Q8N7E2 425 aa15.57■□□□□ 0.08
COL18A1-202ENST00000355480 KCNK17Q96T54 332 aa15.57■□□□□ 0.08
COL18A1-202ENST00000355480 LEUTXA8MZ59 168 aa15.57■□□□□ 0.08
COL18A1-202ENST00000355480 OVCH2Q7RTZ1 564 aa15.57■□□□□ 0.08
COL18A1-202ENST00000355480 ZNF738Q8NE65 137 aa15.57■□□□□ 0.08
COL18A1-202ENST00000355480 DNASE2BQ8WZ79 361 aa15.57■□□□□ 0.08
COL18A1-202ENST00000355480 BET1LQ9NYM9 111 aa15.57■□□□□ 0.08
COL18A1-202ENST00000355480 IL17BQ9UHF5 180 aa15.57■□□□□ 0.08
COL18A1-202ENST00000355480 KCNK7Q9Y2U2 307 aa15.57■□□□□ 0.08
COL18A1-202ENST00000355480 PXMP4Q9Y6I8 212 aa15.57■□□□□ 0.08
COL18A1-202ENST00000355480 TMEM229AB2RXF0 380 aa15.56■□□□□ 0.08
COL18A1-202ENST00000355480 RPL8P62917 257 aaKnown RBP15.56■□□□□ 0.08
COL18A1-202ENST00000355480 TWIST1Q15672 202 aa15.56■□□□□ 0.08
COL18A1-202ENST00000355480 IL19Q9UHD0 177 aa15.56■□□□□ 0.08
COL18A1-202ENST00000355480 H3BQ15 152 aa15.56■□□□□ 0.08
COL18A1-202ENST00000355480 FSTP19883 344 aa15.56■□□□□ 0.08
COL18A1-202ENST00000355480 RGPD4Q7Z3J3 1758 aa15.56■□□□□ 0.08
COL18A1-202ENST00000355480 A0A1W2PP11 408 aa15.56■□□□□ 0.08
COL18A1-202ENST00000355480 A0A1W2PQM1 296 aa15.56■□□□□ 0.08
COL18A1-202ENST00000355480 MMD2Q8IY49 270 aa15.56■□□□□ 0.08
COL18A1-202ENST00000355480 ARID1AO14497 2285 aa15.56■□□□□ 0.08
COL18A1-202ENST00000355480 M0R143 59 aa15.56■□□□□ 0.08
COL18A1-202ENST00000355480 WISP3O95389 354 aaPredicted RBP15.56■□□□□ 0.08
COL18A1-202ENST00000355480 NUBP1P53384 320 aa15.56■□□□□ 0.08
COL18A1-202ENST00000355480 FHL5Q5TD97 284 aa15.56■□□□□ 0.08
COL18A1-202ENST00000355480 TMEM74BQ9NUR3 256 aa15.56■□□□□ 0.08
COL18A1-202ENST00000355480 ZMAT5Q9UDW3 170 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms