RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 A0A1B0GU03 582 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 ZFP36L1Q07352 338 aaKnown RBP10.62□□□□□ -0.71
COLCA1-201ENST00000355430 ARL16Q0P5N6 197 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 ZNF880Q6PDB4 577 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 ETV3LQ6ZN32 361 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 SLC25A40Q8TBP6 338 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 ZNF586Q9NXT0 402 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 IGKV3D-11A0A0A0MRZ8 115 aa10.61□□□□□ -0.71
COLCA1-201ENST00000355430 C9orf172C9J069 976 aa10.61□□□□□ -0.71
COLCA1-201ENST00000355430 ERVFC1-1P60608 527 aa10.61□□□□□ -0.71
COLCA1-201ENST00000355430 KHDC3LQ587J8 217 aa10.61□□□□□ -0.71
COLCA1-201ENST00000355430 TOMM20LQ6UXN7 152 aa10.61□□□□□ -0.71
COLCA1-201ENST00000355430 RSG1Q9BU20 258 aa10.61□□□□□ -0.71
COLCA1-201ENST00000355430 C1RLQ9NZP8 487 aa10.61□□□□□ -0.71
COLCA1-201ENST00000355430 APC2O95996 2303 aa10.61□□□□□ -0.71
COLCA1-201ENST00000355430 TP53BP1Q12888 1972 aaPredicted RBP10.61□□□□□ -0.71
COLCA1-201ENST00000355430 TIMP4Q99727 224 aa10.61□□□□□ -0.71
COLCA1-201ENST00000355430 LPAR2Q9HBW0 351 aa10.61□□□□□ -0.71
COLCA1-201ENST00000355430 PARD6AQ9NPB6 346 aa10.61□□□□□ -0.71
COLCA1-201ENST00000355430 TGIF2-C20orf24A0A0A6YYL0 155 aa10.61□□□□□ -0.71
COLCA1-201ENST00000355430 FBP1P09467 338 aa10.61□□□□□ -0.71
COLCA1-201ENST00000355430 CHODLQ9H9P2 273 aa10.61□□□□□ -0.71
COLCA1-201ENST00000355430 TRGC2P03986 189 aa10.61□□□□□ -0.71
COLCA1-201ENST00000355430 HLA-GP17693 338 aa10.61□□□□□ -0.71
COLCA1-201ENST00000355430 MST1P26927 711 aa10.61□□□□□ -0.71
COLCA1-201ENST00000355430 OR2T10Q8NGZ9 312 aa10.61□□□□□ -0.71
COLCA1-201ENST00000355430 PPIAL4EA0A075B759 164 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 TRBV23-1A0A0A0MS06 115 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 PQLC2LA1A4F0 135 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 TMEM210A6NLX4 147 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 PPIAL4DF5H284 164 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 NTN3O00634 580 aaPredicted RBP10.6□□□□□ -0.71
COLCA1-201ENST00000355430 PPIAL4FP0DN26 164 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 TAS2R45P59539 299 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 SMDT1Q9H4I9 107 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 PPIAL4AQ9Y536 164 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 GNG10P50151 68 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 TBR1Q16650 682 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 ATP6V1FQ16864 119 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 ASPHD2Q6ICH7 369 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 DPPA3Q6W0C5 159 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 SELENOHQ8IZQ5 122 aaKnown RBP10.6□□□□□ -0.71
COLCA1-201ENST00000355430 OR4A4PQ8NGN8 299 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 MEGF10Q96KG7 1140 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 DUXBA0A1W2PPF3 345 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 NPIPB13A6NJU9 1138 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 NPIPB4C9JG80 1138 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 SPINK4O60575 86 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 IGHV3-13P01766 116 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 IGHV3-7P01780 117 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 G6PCP35575 357 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 TNFSF10P50591 281 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 BIVMQ86UB2 503 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 POM121Q96HA1 1249 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 MANBALQ9NQG1 85 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 K7EQM0 130 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 OR10J4P0C629 311 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 BCL2P10415 239 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 MMP9P14780 707 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 GABRA4P48169 554 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 RND3P61587 244 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 C16orf82Q7Z2V1 217 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 MYPOPQ86VE0 399 aaPredicted RBP10.6□□□□□ -0.71
COLCA1-201ENST00000355430 TINAGQ9UJW2 476 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 FUT9Q9Y231 359 aa10.6□□□□□ -0.71
COLCA1-201ENST00000355430 C11orf94C9JXX5 98 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 MMP7P09237 267 aaPredicted RBP10.59□□□□□ -0.71
COLCA1-201ENST00000355430 UBE2G1P62253 170 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 HIST1H3AP68431 136 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 STUMQ69YW2 141 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 APCDD1LQ8NCL9 501 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 MS4A10Q96PG2 267 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 KLHDC3Q9BQ90 382 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 CTDSP1Q9GZU7 261 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 LYRM2Q9NU23 88 aaPredicted RBP10.59□□□□□ -0.71
COLCA1-201ENST00000355430 RNF24Q9Y225 148 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 OR5H1A6NKK0 313 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 H0YIZ8 118 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 CDIPTO14735 213 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 PAGE4O60829 102 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 IGFBP7Q16270 282 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 SMIM15Q7Z3B0 74 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 PAQR4Q8N4S7 273 aaPredicted RBP10.59□□□□□ -0.71
COLCA1-201ENST00000355430 CMTM2Q8TAZ6 248 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 TMEM230Q96A57 120 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 CLCF1Q9UBD9 225 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 C20orf202A1L168 122 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 SUMO1P63165 101 aaKnown RBP10.59□□□□□ -0.71
COLCA1-201ENST00000355430 H1FOOQ8IZA3 346 aaPredicted RBP10.59□□□□□ -0.71
COLCA1-201ENST00000355430 OR5A2Q8NGI9 324 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 DTD1Q8TEA8 209 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 IL22RA2Q969J5 263 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 SMIM8Q96KF7 97 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 SLX1AQ9BQ83 275 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 OR51M1Q9H341 326 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 OR4A8P0C604 315 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 NBL1P41271 181 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 LYG1Q8N1E2 194 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 TPPP3Q9BW30 176 aa10.59□□□□□ -0.71
COLCA1-201ENST00000355430 SRXN1Q9BYN0 137 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms