RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 OR3A2P47893 321 aa4.61□□□□□ -1.67
CD47-201ENST00000355354 GLIPR1P48060 266 aa4.61□□□□□ -1.67
CD47-201ENST00000355354 ZNF616Q08AN1 781 aa4.61□□□□□ -1.67
CD47-201ENST00000355354 RNF113BQ8IZP6 322 aaKnown RBP4.61□□□□□ -1.67
CD47-201ENST00000355354 ABHD12Q8N2K0 398 aa4.61□□□□□ -1.67
CD47-201ENST00000355354 RYR2Q92736 4967 aa4.61□□□□□ -1.67
CD47-201ENST00000355354 ZNF850A8MQ14 1090 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 C2orf74A8MZ97 194 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 PTBP3O95758 552 aaKnown RBP4.6□□□□□ -1.67
CD47-201ENST00000355354 CSTBP04080 98 aaKnown RBP4.6□□□□□ -1.67
CD47-201ENST00000355354 MSX1P28360 303 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 ZNF84P51523 738 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 GFRA1P56159 465 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 RNASE10Q5GAN6 216 aaKnown RBP4.6□□□□□ -1.67
CD47-201ENST00000355354 ZNF611Q8N823 705 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 OR56B2PQ8NGI1 322 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 RTN4IP1Q8WWV3 396 aaPredicted RBP4.6□□□□□ -1.67
CD47-201ENST00000355354 LURAP1Q96LR2 239 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 TBL1XR1Q9BZK7 514 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 ST3GAL6Q9Y274 331 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 R4GMQ9 66 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 HMSDA8MTL9 139 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 DISC1C4P0D8 188 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 ETV2O00321 342 aaPredicted RBP4.6□□□□□ -1.67
CD47-201ENST00000355354 MED6O75586 246 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 KRASP01116 189 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 CRABP1P29762 137 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 BDH1Q02338 343 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 LOXL1Q08397 574 aaPredicted RBP4.6□□□□□ -1.67
CD47-201ENST00000355354 LEMD1Q68G75 181 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 RAB3CQ96E17 227 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 ACY3Q96HD9 319 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 TSNAXQ99598 290 aaKnown RBP4.6□□□□□ -1.67
CD47-201ENST00000355354 OR2J1Q9GZK6 312 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 OPA3Q9H6K4 179 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 PLEK2Q9NYT0 353 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 SPRR3Q9UBC9 169 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 PIGLQ9Y2B2 252 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 WDR1O75083 606 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 HOXB6P17509 224 aaKnown RBP4.6□□□□□ -1.67
CD47-201ENST00000355354 SNCAP37840 140 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 CA7P43166 264 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 BAXQ07812 192 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 PMCHL1Q16048 86 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 KRBOX4Q5JUW0 171 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 OR5C1Q8NGR4 320 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 HIST1H2BLQ99880 126 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 AHSPQ9NZD4 102 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 PHF11Q9UIL8 331 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 ANXA10Q9UJ72 324 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 TRAV5A0A0B4J249 113 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 TMEM225BP0DP42 221 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 HSD17B7P56937 341 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 AESQ08117 197 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 MED9Q9NWA0 146 aa4.6□□□□□ -1.67
CD47-201ENST00000355354 CYB5AP00167 134 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 CXCR1P25024 350 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 RAP2BP61225 183 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 RPS27AP62979 156 aaKnown RBP4.59□□□□□ -1.67
CD47-201ENST00000355354 RPL39P5Q59GN2 51 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 HAGHLQ6PII5 290 aaPredicted RBP4.59□□□□□ -1.67
CD47-201ENST00000355354 NUP54Q7Z3B4 507 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 FAM19A2Q8N3H0 131 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 RERGQ96A58 199 aaPredicted RBP4.59□□□□□ -1.67
CD47-201ENST00000355354 OR5B12Q96R08 314 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 TEX12Q9BXU0 123 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 ZDHHC11Q9H8X9 412 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 STARD9Q9P2P6 4700 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 DMBT1Q9UGM3 2413 aaPredicted RBP4.59□□□□□ -1.67
CD47-201ENST00000355354 hCG_38984A0A1B0GV85 526 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 DUXAA6NLW8 204 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 A8MVM7 634 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 SSSCA1O60232 199 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 AMBPP02760 352 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 GCH1P30793 250 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 HTR5AP47898 357 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 RIPPLY3P57055 190 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 NDUFA9Q16795 377 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 ACTBL2Q562R1 376 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 DHRS7BQ6IAN0 325 aaPredicted RBP4.59□□□□□ -1.67
CD47-201ENST00000355354 ZNF808Q8N4W9 903 aaPredicted RBP4.59□□□□□ -1.67
CD47-201ENST00000355354 CAMKVQ8NCB2 501 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 OR4D5Q8NGN0 318 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 BOD1Q96IK1 185 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 HHLA2Q9UM44 414 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 DNAH11Q96DT5 4516 aa4.59□□□□□ -1.67
CD47-201ENST00000355354 IGHV3OR15-7A0A075B7D8 119 aa4.59□□□□□ -1.68
CD47-201ENST00000355354 CORTO00230 105 aa4.59□□□□□ -1.68
CD47-201ENST00000355354 SCRG1O75711 98 aa4.59□□□□□ -1.68
CD47-201ENST00000355354 IGHG3P01860 377 aa4.59□□□□□ -1.68
CD47-201ENST00000355354 TRA2BP62995 288 aaKnown RBP4.59□□□□□ -1.68
CD47-201ENST00000355354 IGFL4Q6B9Z1 124 aa4.59□□□□□ -1.68
CD47-201ENST00000355354 ZNF600Q6ZNG1 722 aa4.59□□□□□ -1.68
CD47-201ENST00000355354 HSD17B13Q7Z5P4 300 aaPredicted RBP4.59□□□□□ -1.68
CD47-201ENST00000355354 COMMD2Q86X83 199 aa4.59□□□□□ -1.68
CD47-201ENST00000355354 OR10D3Q8NH80 312 aa4.59□□□□□ -1.68
CD47-201ENST00000355354 OR4C12Q96R67 309 aa4.59□□□□□ -1.68
CD47-201ENST00000355354 TECRQ9NZ01 308 aaKnown RBP4.59□□□□□ -1.68
CD47-201ENST00000355354 ANAPC10Q9UM13 185 aa4.59□□□□□ -1.68
CD47-201ENST00000355354 DHDHQ9UQ10 334 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms