RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 FXYD3Q14802 87 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 FAM216AQ8WUB2 273 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 C8orf44Q96CB5 159 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 ZNF414Q96IQ9 312 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 PLSCR4Q9NRQ2 329 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 NCOR1O75376 2440 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 SSTR5P35346 364 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 SUMO3P55854 103 aaPredicted RBP7.08□□□□□ -1.28
SCN8A-201ENST00000354534 DMRT1Q9Y5R6 373 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 SNAI1O95863 264 aaPredicted RBP7.08□□□□□ -1.28
SCN8A-201ENST00000354534 SPSB1Q96BD6 273 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 IL36RNQ9UBH0 155 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 MBD1Q9UIS9 605 aaPredicted RBP7.08□□□□□ -1.28
SCN8A-201ENST00000354534 SHISA7A6NL88 538 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 FAM90A27PA6NNH2 459 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 UPK1AO00322 258 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 PQLC2Q6ZP29 291 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 SLC25A10Q9UBX3 287 aaPredicted RBP7.08□□□□□ -1.28
SCN8A-201ENST00000354534 ORAOV1Q8WV07 137 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 LAT2Q9GZY6 243 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 FRG2CA6NGY1 282 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 OCIAD2Q56VL3 154 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 OR4A5Q8NH83 315 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 GPR27Q9NS67 375 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 FFAR1O14842 300 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 HOXA3O43365 443 aaPredicted RBP7.08□□□□□ -1.28
SCN8A-201ENST00000354534 FGF17O60258 216 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 HLA-DQA1P01909 254 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 TDGF1P3P51864 188 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 MVDP53602 400 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 NAAAQ02083 359 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 SIGLEC14Q08ET2 396 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 EWSR1Q01844 656 aaKnown RBP eCLIP7.08□□□□□ -1.28
SCN8A-201ENST00000354534 TRDCB7Z8K6 153 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 TCF23Q7RTU1 214 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 MRGPRFQ96AM1 343 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 SARAFQ96BY9 339 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 DOK1Q99704 481 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 SLC26A1Q9H2B4 701 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 TNFRSF6BO95407 300 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 ZNF688P0C7X2 276 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 ACVR1Q04771 509 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 CEACAM16Q2WEN9 425 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 DEGS2Q6QHC5 323 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 OR2V1Q8NHB1 315 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 KCNS1Q96KK3 526 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 CAMTA1Q9Y6Y1 1673 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 TRAV8-1A0A0A6YYK1 113 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 GGTLC3B5MD39 225 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 CTAG2O75638 210 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 TRBV20OR9-2A0A075B6H5 130 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 GRIFINA4D1Z8 144 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 TMEM177Q53S58 311 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 ANKRD33Q7Z3H0 272 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 PUSL1Q8N0Z8 303 aaKnown RBP7.07□□□□□ -1.28
SCN8A-201ENST00000354534 MGST2Q99735 147 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 CLN8Q9UBY8 286 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 HCFC2Q9Y5Z7 792 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 TMEM250H0YL14 139 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 ZNF250P15622 560 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 C1orf220Q5T0J3 134 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 TTC9CQ8N5M4 171 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 C1RLQ9NZP8 487 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 PPT2Q9UMR5 302 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 CTXND1A0A1B0GTU2 59 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 C1orf122Q6ZSJ8 110 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 OR6X1Q8NH79 312 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 ZNF296Q8WUU4 475 aaPredicted RBP7.07□□□□□ -1.28
SCN8A-201ENST00000354534 SRSF12Q8WXF0 261 aaKnown RBP7.07□□□□□ -1.28
SCN8A-201ENST00000354534 TM4SF19Q96DZ7 209 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 HARBI1Q96MB7 349 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 TSPAN32Q96QS1 320 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 DNAJC4Q9NNZ3 241 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 MCM3APO60318 1980 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 WNT9BO14905 357 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 CCL2P13500 99 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 H3BUT2 72 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 ATP6V0CP27449 155 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 PFN3P60673 137 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 KLF16Q9BXK1 252 aaPredicted RBP7.07□□□□□ -1.28
SCN8A-201ENST00000354534 MTFP1Q9UDX5 166 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 CD1AP06126 327 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 RAE1P78406 368 aaKnown RBP7.07□□□□□ -1.28
SCN8A-201ENST00000354534 INSL4Q14641 139 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 LDLRAD2Q5SZI1 272 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 ADAD2Q8NCV1 583 aaKnown RBP7.07□□□□□ -1.28
SCN8A-201ENST00000354534 FGF13Q92913 245 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 SLC25A19Q9HC21 320 aa7.07□□□□□ -1.28
SCN8A-201ENST00000354534 SCN4AP35499 1836 aa7.06□□□□□ -1.28
SCN8A-201ENST00000354534 TNFSF10P50591 281 aa7.06□□□□□ -1.28
SCN8A-201ENST00000354534 RFLNAQ6ZTI6 216 aa7.06□□□□□ -1.28
SCN8A-201ENST00000354534 OVCH2Q7RTZ1 564 aa7.06□□□□□ -1.28
SCN8A-201ENST00000354534 VKORC1L1Q8N0U8 176 aa7.06□□□□□ -1.28
SCN8A-201ENST00000354534 ZNF205O95201 554 aa7.06□□□□□ -1.28
SCN8A-201ENST00000354534 RCC1P18754 421 aaPredicted RBP7.06□□□□□ -1.28
SCN8A-201ENST00000354534 STARD10Q9Y365 291 aa7.06□□□□□ -1.28
SCN8A-201ENST00000354534 MRPS21P82921 87 aaKnown RBP7.06□□□□□ -1.28
SCN8A-201ENST00000354534 MARVELD3Q96A59 401 aa7.06□□□□□ -1.28
SCN8A-201ENST00000354534 ZNF714Q96N38 554 aa7.06□□□□□ -1.28
SCN8A-201ENST00000354534 TMEM56-RWDD3S4R434 201 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms