RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 DHRS7CA6NNS2 312 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 M0QZ24 198 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 TMEM50BP56557 158 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 IZUMO4Q1ZYL8 232 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 VSTM2AQ8TAG5 236 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 C14orf79Q96F83 325 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 PERPQ96FX8 193 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 AKR1E2Q96JD6 320 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 FKBP11Q9NYL4 201 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 ELOVL5Q9NYP7 299 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 RCC2Q9P258 522 aaKnown RBP11.72□□□□□ -0.53
SMC6-201ENST00000351948 ZG16O60844 167 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 SCO1O75880 301 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 MT-ND4LP03901 98 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 CDKN1AP38936 164 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 PTGDSP41222 190 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 GAMTQ14353 236 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 FDX2Q6P4F2 183 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 SSX8Q7RTT4 187 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 GGNQ86UU5 652 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 BSCL2Q96G97 398 aaPredicted RBP11.72□□□□□ -0.53
SMC6-201ENST00000351948 SNX22Q96L94 193 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 OPN4Q9UHM6 478 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 FRMPD3Q5JV73 1810 aa11.71□□□□□ -0.53
SMC6-201ENST00000351948 IGLV3-32A0A0A0MS00 114 aa11.71□□□□□ -0.53
SMC6-201ENST00000351948 ZNF705FA8MVS1 300 aaPredicted RBP11.71□□□□□ -0.53
SMC6-201ENST00000351948 RAB29O14966 203 aa11.71□□□□□ -0.53
SMC6-201ENST00000351948 GOSR1O95249 250 aa11.71□□□□□ -0.53
SMC6-201ENST00000351948 ZNF705DP0CH99 300 aaPredicted RBP11.71□□□□□ -0.53
SMC6-201ENST00000351948 ZNF705BP0CI00 300 aaPredicted RBP11.71□□□□□ -0.53
SMC6-201ENST00000351948 PKIBQ9C010 78 aa11.71□□□□□ -0.53
SMC6-201ENST00000351948 MS4A7Q9GZW8 240 aaPredicted RBP11.71□□□□□ -0.53
SMC6-201ENST00000351948 PATZ1Q9HBE1 687 aaKnown RBP11.71□□□□□ -0.53
SMC6-201ENST00000351948 GP6Q9HCN6 339 aa11.71□□□□□ -0.53
SMC6-201ENST00000351948 CALYQ9NYX4 217 aa11.71□□□□□ -0.53
SMC6-201ENST00000351948 SEMA5BQ9P283 1151 aa11.71□□□□□ -0.53
SMC6-201ENST00000351948 ZNF319Q9P2F9 582 aa11.71□□□□□ -0.53
SMC6-201ENST00000351948 TIGITQ495A1 244 aa11.71□□□□□ -0.53
SMC6-201ENST00000351948 DCAF12L2Q5VW00 463 aa11.71□□□□□ -0.53
SMC6-201ENST00000351948 ZIC4Q8N9L1 334 aa11.71□□□□□ -0.53
SMC6-201ENST00000351948 H7BYZ3 331 aa11.71□□□□□ -0.54
SMC6-201ENST00000351948 PLAC9Q5JTB6 97 aa11.71□□□□□ -0.54
SMC6-201ENST00000351948 TMEM65Q6PI78 240 aa11.71□□□□□ -0.54
SMC6-201ENST00000351948 SMIM15Q7Z3B0 74 aa11.71□□□□□ -0.54
SMC6-201ENST00000351948 PFDN5Q99471 154 aa11.71□□□□□ -0.54
SMC6-201ENST00000351948 CDRT15L2A8MXV6 281 aa11.71□□□□□ -0.54
SMC6-201ENST00000351948 TMEM88Q6PEY1 159 aa11.71□□□□□ -0.54
SMC6-201ENST00000351948 FAM216BQ8N7L0 139 aa11.71□□□□□ -0.54
SMC6-201ENST00000351948 MEGF10Q96KG7 1140 aa11.71□□□□□ -0.54
SMC6-201ENST00000351948 DCTN5Q9BTE1 182 aa11.71□□□□□ -0.54
SMC6-201ENST00000351948 PPIAL4CA0A0B4J2A2 164 aa11.7□□□□□ -0.54
SMC6-201ENST00000351948 PPIAL4GP0DN37 164 aa11.7□□□□□ -0.54
SMC6-201ENST00000351948 LGALS7P47929 136 aa11.7□□□□□ -0.54
SMC6-201ENST00000351948 UNC119Q13432 240 aa11.7□□□□□ -0.54
SMC6-201ENST00000351948 RHOFQ9HBH0 211 aa11.7□□□□□ -0.54
SMC6-201ENST00000351948 PIEZO1Q92508 2521 aa11.7□□□□□ -0.54
SMC6-201ENST00000351948 LYNX1G3V0Z9 82 aa11.7□□□□□ -0.54
SMC6-201ENST00000351948 SMAD7O15105 426 aaKnown RBP11.7□□□□□ -0.54
SMC6-201ENST00000351948 CLN5O75503 358 aa11.7□□□□□ -0.54
SMC6-201ENST00000351948 LYNX1P0DP58 116 aa11.7□□□□□ -0.54
SMC6-201ENST00000351948 OR1B1Q8NGR6 318 aa11.7□□□□□ -0.54
SMC6-201ENST00000351948 CACFD1Q9UGQ2 172 aa11.7□□□□□ -0.54
SMC6-201ENST00000351948 RAB4AP20338 218 aa11.7□□□□□ -0.54
SMC6-201ENST00000351948 APOBEC3AP31941 199 aaPredicted RBP11.7□□□□□ -0.54
SMC6-201ENST00000351948 NCR3LG1Q68D85 454 aa11.7□□□□□ -0.54
SMC6-201ENST00000351948 UNQ6494/PRO21346Q6UXR6 183 aa11.7□□□□□ -0.54
SMC6-201ENST00000351948 DBX2Q6ZNG2 339 aa11.7□□□□□ -0.54
SMC6-201ENST00000351948 TMEM147Q9BVK8 224 aa11.7□□□□□ -0.54
SMC6-201ENST00000351948 H0Y8G0 127 aa11.7□□□□□ -0.54
SMC6-201ENST00000351948 GFRA1P56159 465 aa11.7□□□□□ -0.54
SMC6-201ENST00000351948 HMGN3Q15651 99 aa11.7□□□□□ -0.54
SMC6-201ENST00000351948 AQP3Q92482 292 aa11.7□□□□□ -0.54
SMC6-201ENST00000351948 CCL19Q99731 98 aa11.7□□□□□ -0.54
SMC6-201ENST00000351948 KPTNQ9Y664 436 aa11.7□□□□□ -0.54
SMC6-201ENST00000351948 MYLKQ15746 1914 aa11.69□□□□□ -0.54
SMC6-201ENST00000351948 CREBBPQ92793 2442 aa11.69□□□□□ -0.54
SMC6-201ENST00000351948 A0A1B0GTI1 187 aa11.69□□□□□ -0.54
SMC6-201ENST00000351948 RPS11P62280 158 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMC6-201ENST00000351948 THYN1Q9P016 225 aa11.69□□□□□ -0.54
SMC6-201ENST00000351948 IL19Q9UHD0 177 aa11.69□□□□□ -0.54
SMC6-201ENST00000351948 MRPS18CQ9Y3D5 142 aaKnown RBP11.69□□□□□ -0.54
SMC6-201ENST00000351948 TMEM14DPA8MWL7 114 aa11.69□□□□□ -0.54
SMC6-201ENST00000351948 J3QR06 171 aa11.69□□□□□ -0.54
SMC6-201ENST00000351948 NEIL1Q96FI4 390 aaPredicted RBP11.69□□□□□ -0.54
SMC6-201ENST00000351948 CLEC5AQ9NY25 188 aa11.69□□□□□ -0.54
SMC6-201ENST00000351948 B9A039 149 aa11.69□□□□□ -0.54
SMC6-201ENST00000351948 ERVFRD-1P60508 538 aa11.69□□□□□ -0.54
SMC6-201ENST00000351948 TMEM41BQ5BJD5 291 aa11.69□□□□□ -0.54
SMC6-201ENST00000351948 VKORC1L1Q8N0U8 176 aa11.69□□□□□ -0.54
SMC6-201ENST00000351948 ASB13Q8WXK3 278 aa11.69□□□□□ -0.54
SMC6-201ENST00000351948 RHOVQ96L33 236 aa11.69□□□□□ -0.54
SMC6-201ENST00000351948 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.69□□□□□ -0.54
SMC6-201ENST00000351948 MAP1LC3B2A6NCE7 125 aa11.69□□□□□ -0.54
SMC6-201ENST00000351948 INHBBP09529 407 aa11.69□□□□□ -0.54
SMC6-201ENST00000351948 OR10Z1Q8NGY1 313 aa11.69□□□□□ -0.54
SMC6-201ENST00000351948 NTNG2Q96CW9 530 aa11.69□□□□□ -0.54
SMC6-201ENST00000351948 MAP1LC3BQ9GZQ8 125 aa11.69□□□□□ -0.54
SMC6-201ENST00000351948 C1RLQ9NZP8 487 aa11.69□□□□□ -0.54
SMC6-201ENST00000351948 NOTCH3Q9UM47 2321 aa11.68□□□□□ -0.54
SMC6-201ENST00000351948 GNG7O60262 68 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms