RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 PDGFBP01127 241 aaPredicted RBP12.75□□□□□ -0.37
TRAF3-202ENST00000351691 S100GP29377 79 aa12.75□□□□□ -0.37
TRAF3-202ENST00000351691 SOX8P57073 446 aa12.75□□□□□ -0.37
TRAF3-202ENST00000351691 FOXL2P58012 376 aa12.75□□□□□ -0.37
TRAF3-202ENST00000351691 RTP5Q14D33 572 aa12.75□□□□□ -0.37
TRAF3-202ENST00000351691 BRICD5Q6PL45 260 aa12.75□□□□□ -0.37
TRAF3-202ENST00000351691 TMEM54Q969K7 222 aa12.75□□□□□ -0.37
TRAF3-202ENST00000351691 LSM10Q969L4 123 aaKnown RBP12.75□□□□□ -0.37
TRAF3-202ENST00000351691 NABP1Q96AH0 204 aa12.75□□□□□ -0.37
TRAF3-202ENST00000351691 SPACA9Q96E40 222 aaPredicted RBP12.75□□□□□ -0.37
TRAF3-202ENST00000351691 NEIL1Q96FI4 390 aaPredicted RBP12.75□□□□□ -0.37
TRAF3-202ENST00000351691 ZNF442Q9H7R0 627 aa12.75□□□□□ -0.37
TRAF3-202ENST00000351691 VPS13AQ96RL7 3174 aa12.75□□□□□ -0.37
TRAF3-202ENST00000351691 SHISA8B8ZZ34 492 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 TIAF1O95411 115 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 SYNGR4O95473 234 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 WNT5AP41221 380 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 CXCL12P48061 93 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 RAB7AP51149 207 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 PRSS8Q16651 343 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 OR10G3Q8NGC4 313 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 ORAOV1Q8WV07 137 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 TAF15Q92804 592 aaKnown RBP eCLIP12.74□□□□□ -0.37
TRAF3-202ENST00000351691 VAMP8Q9BV40 100 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 DEFB126Q9BYW3 111 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 RIMS4Q9H426 269 aaPredicted RBP12.74□□□□□ -0.37
TRAF3-202ENST00000351691 PSENENQ9NZ42 101 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 ZNF391Q9UJN7 358 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 CCDC163A0A0D9SF12 145 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 TCF21O43680 179 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 SYNGR2O43760 224 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 FUT6P51993 359 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 RPS18P62269 152 aaKnown RBP12.74□□□□□ -0.37
TRAF3-202ENST00000351691 CCL7P80098 99 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 RPP25LQ8N5L8 163 aaKnown RBP12.74□□□□□ -0.37
TRAF3-202ENST00000351691 Q8NFD4 153 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 WFIKKN1Q96NZ8 548 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 TECTBQ96PL2 329 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 DNAJC4Q9NNZ3 241 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 TMEM9BQ9NQ34 198 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 UNC13CQ8NB66 2214 aa12.74□□□□□ -0.37
TRAF3-202ENST00000351691 IGHV5-10-1A0A0J9YXX1 117 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 K7ESF4 209 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 TMPRSS2O15393 492 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 NUPR1O60356 82 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 PGLYRP1O75594 196 aaPredicted RBP12.73□□□□□ -0.37
TRAF3-202ENST00000351691 TDGF1P13385 188 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 F2RP25116 425 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 GCH1P30793 250 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 RBX1P62877 108 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 ARL16Q0P5N6 197 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 SNAI3Q3KNW1 292 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 Q6ZWC4 215 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 HAPLN4Q86UW8 402 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 C11orf42Q8N5U0 333 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 SLC35E1Q96K37 410 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 NCOA6Q14686 2063 aaPredicted RBP12.73□□□□□ -0.37
TRAF3-202ENST00000351691 A0A0U1RQK1 487 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 ZNF320A2RRD8 509 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 ZNF814B7Z6K7 855 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 H3BP45 60 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 IFNL4K9M1U5 179 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 HS3ST1O14792 307 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 NRASP01111 189 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 OPN1LWP04000 364 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 CRYGSP22914 178 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 FAM78BQ5VT40 261 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 GUSBP11Q6P575 273 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 OR4B1Q8NGF8 309 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 OR4F5Q8NH21 305 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 C22orf15Q8WYQ4 148 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 OR4F4Q96R69 305 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 WDR54Q9H977 334 aa12.73□□□□□ -0.37
TRAF3-202ENST00000351691 TRAV9-1A0A075B6T8 112 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 TRAV39A0A0B4J263 110 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 IGKV1D-13A0A0B4J2D9 117 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 A0A0G2JRQ6 117 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 KIR2DS1A0A191URI9 304 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 A0A1W2PQM1 296 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 LRP5LA4QPB2 252 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 K7EP13 123 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 NXPH3O95157 252 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 NAPSAO96009 420 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 IGKV1-13P0DP09 117 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 CHRNB4P30926 498 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 KIR2DS4P43632 304 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 CDKN1BP46527 198 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 KIR2DS1Q14954 304 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 CLEC12BQ2HXU8 276 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 MRPL14Q6P1L8 145 aaKnown RBP12.72□□□□□ -0.37
TRAF3-202ENST00000351691 CCDC74BQ96LY2 380 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 OR4C12Q96R67 309 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 CCL28Q9NRJ3 127 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 RYDENQ9NUL5 291 aaKnown RBP12.72□□□□□ -0.37
TRAF3-202ENST00000351691 WDFY4Q6ZS81 3184 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 LOC102723996A0A087X1L8 192 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 LY6G6EA0A0G2JKS1 128 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 CLDN15P56746 228 aa12.72□□□□□ -0.37
TRAF3-202ENST00000351691 KLF3P57682 345 aaPredicted RBP12.72□□□□□ -0.37
TRAF3-202ENST00000351691 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms