RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 USF3Q68DE3 2245 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 DFFBO76075 338 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 ACP1P24666 158 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 S100GP29377 79 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 CEACAM6P40199 344 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 PYY3Q5JQD4 70 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 FAM209BQ5JX69 171 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 DCAF10Q5QP82 559 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 OR4C12Q96R67 309 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 CABLES2Q9BTV7 478 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 PLK3Q9H4B4 646 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 OR14J1Q9UGF5 321 aa15.3■□□□□ 0.04
PTP4A3-202ENST00000349124 TRBV6-6A0A0A6YYG2 114 aa15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 HIST1H2BKO60814 126 aa15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 HIST1H2BJP06899 126 aa15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 HIST1H2BOP23527 126 aa15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 HIST1H2BBP33778 126 aa15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 HIST1H2BDP58876 126 aa15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 HIST1H2BCP62807 126 aa15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 HIST2H2BEQ16778 126 aa15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 SCCPDHQ8NBX0 429 aa15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 GTF3AQ92664 365 aaKnown RBP15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 HIST1H2BHQ93079 126 aa15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 RCC1LQ96I51 464 aaKnown RBP15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 HIST1H2BNQ99877 126 aa15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 HIST1H2BMQ99879 126 aa15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 MPC1Q9Y5U8 109 aa15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 TNRC6AQ8NDV7 1962 aaKnown RBP15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 DOCK11Q5JSL3 2073 aa15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 LINC00205P59089 165 aa15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 OR8G2PQ6IF36 304 aa15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 SNIP1Q8TAD8 396 aaKnown RBP15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 OR2J1Q9GZK6 312 aa15.29■□□□□ 0.04
PTP4A3-202ENST00000349124 CHD3Q12873 2000 aaKnown RBP15.28■□□□□ 0.04
PTP4A3-202ENST00000349124 A0A087WWC5 75 aa15.28■□□□□ 0.04
PTP4A3-202ENST00000349124 HBE1P02100 147 aa15.28■□□□□ 0.04
PTP4A3-202ENST00000349124 OR8G1Q15617 311 aa15.28■□□□□ 0.04
PTP4A3-202ENST00000349124 ATP1A1-AS1Q5TC04 95 aa15.28■□□□□ 0.04
PTP4A3-202ENST00000349124 CXorf67Q86X51 503 aaPredicted RBP15.28■□□□□ 0.04
PTP4A3-202ENST00000349124 DRAM1Q8N682 238 aa15.28■□□□□ 0.04
PTP4A3-202ENST00000349124 ZNF610Q8N9Z0 462 aa15.28■□□□□ 0.04
PTP4A3-202ENST00000349124 WDYHV1Q96HA8 205 aa15.28■□□□□ 0.04
PTP4A3-202ENST00000349124 TCEAL7Q9BRU2 100 aa15.28■□□□□ 0.04
PTP4A3-202ENST00000349124 OR5B21A6NL26 309 aa15.28■□□□□ 0.04
PTP4A3-202ENST00000349124 RAMP3O60896 148 aa15.28■□□□□ 0.04
PTP4A3-202ENST00000349124 IGHV2-70P01814 119 aa15.28■□□□□ 0.04
PTP4A3-202ENST00000349124 GRPP07492 148 aa15.28■□□□□ 0.04
PTP4A3-202ENST00000349124 C1orf210Q8IVY1 113 aa15.28■□□□□ 0.04
PTP4A3-202ENST00000349124 FGFRL1Q8N441 504 aa15.28■□□□□ 0.04
PTP4A3-202ENST00000349124 ABHD5Q8WTS1 349 aa15.28■□□□□ 0.04
PTP4A3-202ENST00000349124 IGKV1D-33P01593 117 aa15.27■□□□□ 0.04
PTP4A3-202ENST00000349124 IGKV1-33P01594 117 aa15.27■□□□□ 0.04
PTP4A3-202ENST00000349124 MEOX1P50221 254 aa15.27■□□□□ 0.04
PTP4A3-202ENST00000349124 SLC35E3Q7Z769 313 aa15.27■□□□□ 0.04
PTP4A3-202ENST00000349124 LILRB2Q8N423 598 aa15.27■□□□□ 0.04
PTP4A3-202ENST00000349124 CA5BP1Q8WTZ4 195 aa15.27■□□□□ 0.04
PTP4A3-202ENST00000349124 BCL2L2Q92843 193 aaPredicted RBP15.27■□□□□ 0.04
PTP4A3-202ENST00000349124 J3QT63 122 aa15.27■□□□□ 0.03
PTP4A3-202ENST00000349124 BCL2P10415 239 aa15.27■□□□□ 0.03
PTP4A3-202ENST00000349124 CDX1P47902 265 aaPredicted RBP15.27■□□□□ 0.03
PTP4A3-202ENST00000349124 RAB2AP61019 212 aa15.27■□□□□ 0.03
PTP4A3-202ENST00000349124 RNFT1Q5M7Z0 435 aa15.27■□□□□ 0.03
PTP4A3-202ENST00000349124 ZNF497Q6ZNH5 498 aa15.27■□□□□ 0.03
PTP4A3-202ENST00000349124 GPR61Q9BZJ8 451 aa15.27■□□□□ 0.03
PTP4A3-202ENST00000349124 BOD1L1Q8NFC6 3051 aa15.26■□□□□ 0.03
PTP4A3-202ENST00000349124 CEBPZOSA8MTT3 80 aa15.26■□□□□ 0.03
PTP4A3-202ENST00000349124 SOD3P08294 240 aa15.26■□□□□ 0.03
PTP4A3-202ENST00000349124 ZNF808Q8N4W9 903 aaPredicted RBP15.26■□□□□ 0.03
PTP4A3-202ENST00000349124 GP6Q9HCN6 339 aa15.26■□□□□ 0.03
PTP4A3-202ENST00000349124 TRAV1-1A0A0B4J248 108 aa15.26■□□□□ 0.03
PTP4A3-202ENST00000349124 UBE2L5PA0A1B0GUS4 154 aa15.26■□□□□ 0.03
PTP4A3-202ENST00000349124 PSPNO60542 156 aa15.26■□□□□ 0.03
PTP4A3-202ENST00000349124 KRASP01116 189 aa15.26■□□□□ 0.03
PTP4A3-202ENST00000349124 LRRC75BQ2VPJ9 315 aa15.26■□□□□ 0.03
PTP4A3-202ENST00000349124 ZNF826PQ6ZT77 177 aa15.26■□□□□ 0.03
PTP4A3-202ENST00000349124 OR1L1Q8NH94 360 aa15.26■□□□□ 0.03
PTP4A3-202ENST00000349124 FRZBQ92765 325 aa15.26■□□□□ 0.03
PTP4A3-202ENST00000349124 WNT9BO14905 357 aa15.25■□□□□ 0.03
PTP4A3-202ENST00000349124 WISP2O76076 250 aa15.25■□□□□ 0.03
PTP4A3-202ENST00000349124 NXPH2O95156 264 aa15.25■□□□□ 0.03
PTP4A3-202ENST00000349124 S100PP25815 95 aa15.25■□□□□ 0.03
PTP4A3-202ENST00000349124 MDH2P40926 338 aaKnown RBP15.25■□□□□ 0.03
PTP4A3-202ENST00000349124 IDH3GP51553 393 aaPredicted RBP15.25■□□□□ 0.03
PTP4A3-202ENST00000349124 RPL30P62888 115 aaKnown RBP15.25■□□□□ 0.03
PTP4A3-202ENST00000349124 LINC00596Q86U02 117 aa15.25■□□□□ 0.03
PTP4A3-202ENST00000349124 OR10D4PQ8NGN7 298 aa15.25■□□□□ 0.03
PTP4A3-202ENST00000349124 LSM10Q969L4 123 aaKnown RBP15.25■□□□□ 0.03
PTP4A3-202ENST00000349124 ARRDC1-AS1Q9H2J1 176 aa15.25■□□□□ 0.03
PTP4A3-202ENST00000349124 RBKSQ9H477 322 aa15.25■□□□□ 0.03
PTP4A3-202ENST00000349124 SLC25A6P12236 298 aa15.25■□□□□ 0.03
PTP4A3-202ENST00000349124 DEFA4P12838 97 aa15.25■□□□□ 0.03
PTP4A3-202ENST00000349124 G6PCP35575 357 aa15.25■□□□□ 0.03
PTP4A3-202ENST00000349124 C9orf152Q5JTZ5 239 aa15.25■□□□□ 0.03
PTP4A3-202ENST00000349124 RPP25LQ8N5L8 163 aaKnown RBP15.25■□□□□ 0.03
PTP4A3-202ENST00000349124 C5orf30Q96GV9 206 aa15.25■□□□□ 0.03
PTP4A3-202ENST00000349124 PKIBQ9C010 78 aa15.25■□□□□ 0.03
PTP4A3-202ENST00000349124 CISD1Q9NZ45 108 aaKnown RBP15.25■□□□□ 0.03
PTP4A3-202ENST00000349124 SP1P08047 785 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms