RNA–Protein interactions for RNA: ENST00000348124.5

TRAF6-201, Transcript of TNF receptor associated factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF6, Length 2,558 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6-201ENST00000348124 FAM90A16PA6NEW6 464 aa13.05□□□□□ -0.32
TRAF6-201ENST00000348124 FAM90A20PA6NIJ5 464 aa13.05□□□□□ -0.32
TRAF6-201ENST00000348124 FAM90A8PA6NJQ4 464 aa13.05□□□□□ -0.32
TRAF6-201ENST00000348124 FAM90A7PA6NKC0 464 aa13.05□□□□□ -0.32
TRAF6-201ENST00000348124 FAM90A22PA8MWA6 464 aa13.05□□□□□ -0.32
TRAF6-201ENST00000348124 FAM90A12PA8MX19 464 aa13.05□□□□□ -0.32
TRAF6-201ENST00000348124 FAM90A5PA8MXJ8 464 aa13.05□□□□□ -0.32
TRAF6-201ENST00000348124 FAM90A23PA8MXZ1 464 aa13.05□□□□□ -0.32
TRAF6-201ENST00000348124 PDGFBP01127 241 aaPredicted RBP13.05□□□□□ -0.32
TRAF6-201ENST00000348124 FAM90A15PP0C7V4 464 aa13.05□□□□□ -0.32
TRAF6-201ENST00000348124 FAM90A13PP0C7W8 464 aa13.05□□□□□ -0.32
TRAF6-201ENST00000348124 FAM90A14PP0C7W9 464 aa13.05□□□□□ -0.32
TRAF6-201ENST00000348124 FAM90A24PP0C7X0 464 aa13.05□□□□□ -0.32
TRAF6-201ENST00000348124 RPL15P61313 204 aaKnown RBP13.05□□□□□ -0.32
TRAF6-201ENST00000348124 TMEM38BQ9NVV0 291 aa13.05□□□□□ -0.32
TRAF6-201ENST00000348124 ERRFI1Q9UJM3 462 aaPredicted RBP13.05□□□□□ -0.32
TRAF6-201ENST00000348124 CHCHD2Q9Y6H1 151 aaPredicted RBP13.05□□□□□ -0.32
TRAF6-201ENST00000348124 ABCA7Q8IZY2 2146 aa13.05□□□□□ -0.32
TRAF6-201ENST00000348124 A0A1W2PR77 199 aa13.05□□□□□ -0.32
TRAF6-201ENST00000348124 IGKV1-5P01602 117 aa13.05□□□□□ -0.32
TRAF6-201ENST00000348124 CD33P20138 364 aa13.05□□□□□ -0.32
TRAF6-201ENST00000348124 GCH1P30793 250 aa13.05□□□□□ -0.32
TRAF6-201ENST00000348124 LCN2P80188 198 aa13.05□□□□□ -0.32
TRAF6-201ENST00000348124 ZCCHC14Q8WYQ9 949 aaKnown RBP13.05□□□□□ -0.32
TRAF6-201ENST00000348124 TECTBQ96PL2 329 aa13.05□□□□□ -0.32
TRAF6-201ENST00000348124 PARD6GQ9BYG4 376 aaPredicted RBP13.05□□□□□ -0.32
TRAF6-201ENST00000348124 DEFB126Q9BYW3 111 aa13.05□□□□□ -0.32
TRAF6-201ENST00000348124 OR2W1Q9Y3N9 320 aa13.05□□□□□ -0.32
TRAF6-201ENST00000348124 CTXND1A0A1B0GTU2 59 aa13.04□□□□□ -0.32
TRAF6-201ENST00000348124 TNFSF11O14788 317 aa13.04□□□□□ -0.32
TRAF6-201ENST00000348124 KRTAP27-1Q3LI81 207 aa13.04□□□□□ -0.32
TRAF6-201ENST00000348124 TRIM61Q5EBN2 209 aa13.04□□□□□ -0.32
TRAF6-201ENST00000348124 ZNF324BQ6AW86 544 aaPredicted RBP13.04□□□□□ -0.32
TRAF6-201ENST00000348124 Q8NFD4 153 aa13.04□□□□□ -0.32
TRAF6-201ENST00000348124 FGFBP3Q8TAT2 258 aa13.04□□□□□ -0.32
TRAF6-201ENST00000348124 LSM10Q969L4 123 aaKnown RBP13.04□□□□□ -0.32
TRAF6-201ENST00000348124 NEIL1Q96FI4 390 aaPredicted RBP13.04□□□□□ -0.32
TRAF6-201ENST00000348124 ALKBH3Q96Q83 286 aaPredicted RBP13.04□□□□□ -0.32
TRAF6-201ENST00000348124 WNT5BQ9H1J7 359 aa13.04□□□□□ -0.32
TRAF6-201ENST00000348124 EML6Q6ZMW3 1958 aa13.04□□□□□ -0.32
TRAF6-201ENST00000348124 ZNF407Q9C0G0 2248 aa13.04□□□□□ -0.32
TRAF6-201ENST00000348124 TP53I11O14683 189 aa13.04□□□□□ -0.32
TRAF6-201ENST00000348124 PAGE4O60829 102 aa13.04□□□□□ -0.32
TRAF6-201ENST00000348124 DKK1O94907 266 aa13.04□□□□□ -0.32
TRAF6-201ENST00000348124 TIAF1O95411 115 aa13.04□□□□□ -0.32
TRAF6-201ENST00000348124 EDN3P14138 238 aa13.04□□□□□ -0.32
TRAF6-201ENST00000348124 FGF12P61328 243 aa13.04□□□□□ -0.32
TRAF6-201ENST00000348124 PRDX4Q13162 271 aa13.04□□□□□ -0.32
TRAF6-201ENST00000348124 TOMM20LQ6UXN7 152 aa13.04□□□□□ -0.32
TRAF6-201ENST00000348124 C20orf204Q6ZNR8 217 aa13.04□□□□□ -0.32
TRAF6-201ENST00000348124 DIRC2Q96SL1 478 aa13.04□□□□□ -0.32
TRAF6-201ENST00000348124 OR2H1Q9GZK4 316 aa13.04□□□□□ -0.32
TRAF6-201ENST00000348124 PARD6AQ9NPB6 346 aa13.04□□□□□ -0.32
TRAF6-201ENST00000348124 MANBALQ9NQG1 85 aa13.04□□□□□ -0.32
TRAF6-201ENST00000348124 AURKAIP1Q9NWT8 199 aaPredicted RBP13.04□□□□□ -0.32
TRAF6-201ENST00000348124 PIGBOS1A0A0B4J2F0 54 aa13.03□□□□□ -0.32
TRAF6-201ENST00000348124 C1QTNF9BB2RNN3 333 aa13.03□□□□□ -0.32
TRAF6-201ENST00000348124 VENTXO95231 258 aa13.03□□□□□ -0.32
TRAF6-201ENST00000348124 CRYABP02511 175 aaKnown RBP13.03□□□□□ -0.32
TRAF6-201ENST00000348124 NTF4P34130 210 aa13.03□□□□□ -0.32
TRAF6-201ENST00000348124 PCP4P48539 62 aa13.03□□□□□ -0.32
TRAF6-201ENST00000348124 HNRNPKP61978 463 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRAF6-201ENST00000348124 ARSJQ5FYB0 599 aaPredicted RBP13.03□□□□□ -0.32
TRAF6-201ENST00000348124 ZDHHC23Q8IYP9 409 aa13.03□□□□□ -0.32
TRAF6-201ENST00000348124 OR10G9Q8NGN4 311 aa13.03□□□□□ -0.32
TRAF6-201ENST00000348124 OR10G7Q8NGN6 311 aa13.03□□□□□ -0.32
TRAF6-201ENST00000348124 CLDN23Q96B33 292 aa13.03□□□□□ -0.32
TRAF6-201ENST00000348124 SRXN1Q9BYN0 137 aa13.03□□□□□ -0.32
TRAF6-201ENST00000348124 MRPS18CQ9Y3D5 142 aaKnown RBP13.03□□□□□ -0.32
TRAF6-201ENST00000348124 TIMM9Q9Y5J7 89 aa13.03□□□□□ -0.32
TRAF6-201ENST00000348124 PXMP4Q9Y6I8 212 aa13.03□□□□□ -0.32
TRAF6-201ENST00000348124 A0A0J9YW62 118 aa13.03□□□□□ -0.32
TRAF6-201ENST00000348124 G3V3Y1 287 aa13.03□□□□□ -0.32
TRAF6-201ENST00000348124 ZNF16P17020 682 aaPredicted RBP13.03□□□□□ -0.32
TRAF6-201ENST00000348124 PPP1CBP62140 327 aa13.03□□□□□ -0.32
TRAF6-201ENST00000348124 TDRG1Q3Y452 100 aa13.03□□□□□ -0.32
TRAF6-201ENST00000348124 MYPOPQ86VE0 399 aaPredicted RBP13.03□□□□□ -0.32
TRAF6-201ENST00000348124 WDYHV1Q96HA8 205 aa13.03□□□□□ -0.32
TRAF6-201ENST00000348124 IMMP2LQ96T52 175 aa13.03□□□□□ -0.32
TRAF6-201ENST00000348124 LINC00614P0C842 121 aa13.02□□□□□ -0.32
TRAF6-201ENST00000348124 GPM6AP51674 278 aa13.02□□□□□ -0.32
TRAF6-201ENST00000348124 BATFQ16520 125 aa13.02□□□□□ -0.32
TRAF6-201ENST00000348124 MRPL52Q86TS9 123 aaKnown RBP13.02□□□□□ -0.32
TRAF6-201ENST00000348124 MIEN1Q9BRT3 115 aa13.02□□□□□ -0.32
TRAF6-201ENST00000348124 LPAR2Q9HBW0 351 aa13.02□□□□□ -0.32
TRAF6-201ENST00000348124 PPP1R3CQ9UQK1 317 aa13.02□□□□□ -0.32
TRAF6-201ENST00000348124 SDK1Q7Z5N4 2213 aa13.02□□□□□ -0.33
TRAF6-201ENST00000348124 SELEP16581 610 aa13.02□□□□□ -0.33
TRAF6-201ENST00000348124 NPPCP23582 126 aa13.02□□□□□ -0.33
TRAF6-201ENST00000348124 CD27P26842 260 aa13.02□□□□□ -0.33
TRAF6-201ENST00000348124 BRS3P32247 399 aa13.02□□□□□ -0.33
TRAF6-201ENST00000348124 PMP22Q01453 160 aa13.02□□□□□ -0.33
TRAF6-201ENST00000348124 RABEPKQ7Z6M1 372 aa13.02□□□□□ -0.33
TRAF6-201ENST00000348124 CMTM2Q8TAZ6 248 aa13.02□□□□□ -0.33
TRAF6-201ENST00000348124 IL1F10Q8WWZ1 152 aa13.02□□□□□ -0.33
TRAF6-201ENST00000348124 FGF23Q9GZV9 251 aaPredicted RBP13.02□□□□□ -0.33
TRAF6-201ENST00000348124 LAMA1P25391 3075 aa13.01□□□□□ -0.33
TRAF6-201ENST00000348124 CLDN1O95832 211 aa13.01□□□□□ -0.33
TRAF6-201ENST00000348124 MRPS11P82912 194 aaKnown RBP13.01□□□□□ -0.33
TRAF6-201ENST00000348124 TMEM144Q7Z5S9 345 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms