RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 DUX4L5P0CJ88 424 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 DUX4L6P0CJ89 424 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 DUX4L7P0CJ90 424 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 IGHV3-43DP0DP04 118 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 MDKP21741 143 aaPredicted RBP5.08□□□□□ -1.6
CLCN3-201ENST00000347613 HOXA1P49639 335 aaPredicted RBP5.08□□□□□ -1.6
CLCN3-201ENST00000347613 NCMAPQ5T1S8 102 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 PRAMEF6Q5VXH4 476 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 MKXQ8IYA7 352 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 IL22RA1Q8N6P7 574 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 FAM169BQ8N8A8 192 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 WFDC12Q8WWY7 111 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 TMPRSS5Q9H3S3 457 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 PLEKHF2Q9H8W4 249 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 MSL2Q9HCI7 577 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 RPRMQ9NS64 109 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 DUX4Q9UBX2 424 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 OR14J1Q9UGF5 321 aa5.08□□□□□ -1.6
CLCN3-201ENST00000347613 ROS1P08922 2347 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 TGIF2-C20orf24A0A0A6YYL0 155 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 RBFOX3A6NFN3 312 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 DEFB108AA8MXU0 73 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 NUDT19A8MXV4 375 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 DEGS1O15121 323 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 PPIHO43447 177 aaKnown RBP5.07□□□□□ -1.6
CLCN3-201ENST00000347613 WDR1O75083 606 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 PTBP3O95758 552 aaKnown RBP5.07□□□□□ -1.6
CLCN3-201ENST00000347613 VDAC1P21796 283 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 CEACAM6P40199 344 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 PMELP40967 661 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 HLA-DRB3P79483 266 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 IL24Q13007 206 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 EIF4EBP1Q13541 118 aaPredicted RBP5.07□□□□□ -1.6
CLCN3-201ENST00000347613 SLC10A1Q14973 349 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 C1orf185Q5T7R7 199 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 GFI1BQ5VTD9 330 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 LRP11Q86VZ4 500 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 TGIF2LYQ8IUE0 185 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 SAXO1Q8IYX7 474 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 DRAM1Q8N682 238 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 FDCSPQ8NFU4 85 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 OR5D13Q8NGL4 314 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 CLDND2Q8NHS1 167 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 NANPQ8TBE9 248 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 ZDHHC16Q969W1 377 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 RAB39BQ96DA2 213 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 COQ2Q96H96 371 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 URGCP-MRPS24S4R325 110 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 LINC00473A8K010 186 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 H0Y980 276 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 H3BQ15 152 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 M0R296 226 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 SYNGR4O95473 234 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 IGHV2-5P01817 119 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 NQO2P16083 231 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 SOX8P57073 446 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 PRSS8Q16651 343 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 WDR31Q8NA23 367 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 OR10J5Q8NHC4 309 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 Q8WTZ3 238 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 CABLES2Q9BTV7 478 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 SLC35B3Q9H1N7 401 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 ZNF665Q9H7R5 613 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 KCNJ16Q9NPI9 418 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 GVINP1Q7Z2Y8 2422 aa5.07□□□□□ -1.6
CLCN3-201ENST00000347613 C17orf98A8MV24 154 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 YIF1AO95070 293 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 COX5BP10606 129 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 FOLR2P14207 255 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 SSTR5P35346 364 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 G6PCP35575 357 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 GNG3P63215 75 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 DUX4L9Q6RFH8 374 aaPredicted RBP5.06□□□□□ -1.6
CLCN3-201ENST00000347613 SEM1Q6ZVN7 128 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 ZNF808Q8N4W9 903 aaPredicted RBP5.06□□□□□ -1.6
CLCN3-201ENST00000347613 CCDC71LQ8N9Z2 235 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 C9orf106Q8NAJ2 232 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 OR10V1Q8NGI7 309 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 RFESDQ8TAC1 157 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 EDARADDQ8WWZ3 215 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 MUCL1Q96DR8 90 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 ZDHHC11Q9H8X9 412 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 UFSP2Q9NUQ7 469 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 RAI1Q7Z5J4 1906 aaPredicted RBP5.06□□□□□ -1.6
CLCN3-201ENST00000347613 FAM90A10PA6NDY2 464 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 FAM90A18PA6NE21 464 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 FAM90A16PA6NEW6 464 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 FAM90A20PA6NIJ5 464 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 FAM90A8PA6NJQ4 464 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 FAM90A7PA6NKC0 464 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 FAM90A22PA8MWA6 464 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 FAM90A12PA8MX19 464 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 FAM90A5PA8MXJ8 464 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 FAM90A23PA8MXZ1 464 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 C12orf77C9JDV5 145 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 K7EM74 188 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 SCAF4O95104 1147 aaKnown RBP5.06□□□□□ -1.6
CLCN3-201ENST00000347613 FAM90A15PP0C7V4 464 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 FAM90A13PP0C7W8 464 aa5.06□□□□□ -1.6
CLCN3-201ENST00000347613 FAM90A14PP0C7W9 464 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms