RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 GABRG3Q99928 467 aa15.15■□□□□ 0.02
SPAST-202ENST00000345662 ZPBPQ9BS86 351 aa15.15■□□□□ 0.02
SPAST-202ENST00000345662 UQCRFS1P47985 274 aa15.15■□□□□ 0.02
SPAST-202ENST00000345662 UCN2Q96RP3 112 aa15.15■□□□□ 0.02
SPAST-202ENST00000345662 KCNK17Q96T54 332 aa15.15■□□□□ 0.02
SPAST-202ENST00000345662 NMUP48645 174 aa15.15■□□□□ 0.02
SPAST-202ENST00000345662 PTCRAQ6ISU1 281 aaPredicted RBP15.15■□□□□ 0.02
SPAST-202ENST00000345662 GPR146Q96CH1 333 aa15.15■□□□□ 0.02
SPAST-202ENST00000345662 GPR35Q9HC97 309 aa15.15■□□□□ 0.02
SPAST-202ENST00000345662 FAM206AQ9NX38 181 aa15.15■□□□□ 0.02
SPAST-202ENST00000345662 TMEM265A0A087WTH1 108 aa15.15■□□□□ 0.02
SPAST-202ENST00000345662 DHRS7CA6NNS2 312 aa15.15■□□□□ 0.02
SPAST-202ENST00000345662 A8MWL6 223 aa15.15■□□□□ 0.02
SPAST-202ENST00000345662 ZNF721Q8TF20 911 aa15.15■□□□□ 0.02
SPAST-202ENST00000345662 A0A087WWC5 75 aa15.14■□□□□ 0.01
SPAST-202ENST00000345662 SCTP09683 121 aa15.14■□□□□ 0.01
SPAST-202ENST00000345662 AESQ08117 197 aa15.14■□□□□ 0.01
SPAST-202ENST00000345662 SRSF9Q13242 221 aaKnown RBP eCLIP15.14■□□□□ 0.01
SPAST-202ENST00000345662 G6PC2Q9NQR9 355 aa15.14■□□□□ 0.01
SPAST-202ENST00000345662 GRIFINA4D1Z8 144 aa15.14■□□□□ 0.01
SPAST-202ENST00000345662 TMEM250H0YL14 139 aa15.14■□□□□ 0.01
SPAST-202ENST00000345662 RP1P56715 2156 aa15.14■□□□□ 0.01
SPAST-202ENST00000345662 FAM27BQ5VT28 67 aa15.14■□□□□ 0.01
SPAST-202ENST00000345662 OR2M3Q8NG83 312 aa15.14■□□□□ 0.01
SPAST-202ENST00000345662 QTRT1Q9BXR0 403 aaKnown RBP15.14■□□□□ 0.01
SPAST-202ENST00000345662 ZNF576Q9H609 170 aa15.14■□□□□ 0.01
SPAST-202ENST00000345662 UBE2CO00762 179 aa15.14■□□□□ 0.01
SPAST-202ENST00000345662 SYNGR1O43759 233 aa15.14■□□□□ 0.01
SPAST-202ENST00000345662 LEPROTL1O95214 131 aa15.14■□□□□ 0.01
SPAST-202ENST00000345662 IFI6P09912 130 aa15.14■□□□□ 0.01
SPAST-202ENST00000345662 OR10S1Q8NGN2 331 aa15.14■□□□□ 0.01
SPAST-202ENST00000345662 PGLYRP1O75594 196 aaPredicted RBP15.14■□□□□ 0.01
SPAST-202ENST00000345662 IL11P20809 199 aa15.14■□□□□ 0.01
SPAST-202ENST00000345662 NR2C2APQ86WQ0 139 aa15.14■□□□□ 0.01
SPAST-202ENST00000345662 MARS2Q96GW9 593 aaKnown RBP15.14■□□□□ 0.01
SPAST-202ENST00000345662 PHF7Q9BWX1 381 aaPredicted RBP15.14■□□□□ 0.01
SPAST-202ENST00000345662 C3orf80F5H4A9 247 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 PRRG2O14669 202 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 FGF12P61328 243 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 DOLPP1Q86YN1 238 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 K7ESF4 209 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 SNCGO76070 127 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 FOLR2P14207 255 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 HERVK_113P61574 105 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 SLC25A33Q9BSK2 321 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 MCM3APO60318 1980 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.13■□□□□ 0.01
SPAST-202ENST00000345662 TRBV9A0A0B4J1U6 114 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 FAM90A26D6RGX4 464 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 M0R296 226 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 AMY1AP04745 511 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 ACP1P24666 158 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 CADM4Q8NFZ8 388 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 RPEQ96AT9 228 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 RBM14Q96PK6 669 aaKnown RBP15.13■□□□□ 0.01
SPAST-202ENST00000345662 TMEM140Q9NV12 185 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 PLA2G3Q9NZ20 509 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 SRIP30626 198 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 WNT5AP41221 380 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 ABHD3Q8WU67 409 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 ZNF385AQ96PM9 386 aaKnown RBP15.13■□□□□ 0.01
SPAST-202ENST00000345662 UFC1Q9Y3C8 167 aa15.13■□□□□ 0.01
SPAST-202ENST00000345662 DOCK5Q9H7D0 1870 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 SRP19P09132 144 aaKnown RBP15.12■□□□□ 0.01
SPAST-202ENST00000345662 GUSBP11Q6P575 273 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 IER2Q9BTL4 223 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 NDUFAF3Q9BU61 184 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 IL36RNQ9UBH0 155 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 FAM90A10PA6NDY2 464 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 FAM90A18PA6NE21 464 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 FAM90A16PA6NEW6 464 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 FAM90A20PA6NIJ5 464 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 FAM90A8PA6NJQ4 464 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 FAM90A7PA6NKC0 464 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 FAM90A22PA8MWA6 464 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 FAM90A12PA8MX19 464 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 FAM90A5PA8MXJ8 464 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 FAM90A23PA8MXZ1 464 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 LINC01565O15544 149 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 DNPH1O43598 174 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 FAM90A15PP0C7V4 464 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 FAM90A13PP0C7W8 464 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 FAM90A14PP0C7W9 464 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 FAM90A24PP0C7X0 464 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 TMEM92Q6UXU6 159 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 PAXXQ9BUH6 204 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 PSMG3Q9BT73 122 aaPredicted RBP15.12■□□□□ 0.01
SPAST-202ENST00000345662 SPTBP11277 2137 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 LYZL6O75951 148 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 HPRT1P00492 218 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 POU2F2P09086 479 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 RELBQ01201 579 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 HYAL1Q12794 435 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 ZNF124Q15973 351 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 TMEM45BQ96B21 275 aa15.12■□□□□ 0.01
SPAST-202ENST00000345662 RP1L1Q8IWN7 2480 aaPredicted RBP15.12■□□□□ 0.01
SPAST-202ENST00000345662 VENTXO95231 258 aa15.11■□□□□ 0.01
SPAST-202ENST00000345662 UCP3P55916 312 aa15.11■□□□□ 0.01
SPAST-202ENST00000345662 LCN2P80188 198 aa15.11■□□□□ 0.01
SPAST-202ENST00000345662 TNXAQ16473 311 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms