RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 FGF5P12034 268 aa13.34□□□□□ -0.27
PTPRU-201ENST00000345512 C18orf12Q96KH6 178 aa13.34□□□□□ -0.27
PTPRU-201ENST00000345512 RNF122Q9H9V4 155 aa13.34□□□□□ -0.27
PTPRU-201ENST00000345512 MYPOPQ86VE0 399 aaPredicted RBP13.33□□□□□ -0.27
PTPRU-201ENST00000345512 TAF15Q92804 592 aaKnown RBP eCLIP13.33□□□□□ -0.27
PTPRU-201ENST00000345512 DLL3Q9NYJ7 618 aa13.33□□□□□ -0.27
PTPRU-201ENST00000345512 OR1A1Q9P1Q5 309 aa13.33□□□□□ -0.27
PTPRU-201ENST00000345512 ICE1Q9Y2F5 2266 aa13.33□□□□□ -0.28
PTPRU-201ENST00000345512 KRTDAPP60985 99 aa13.33□□□□□ -0.28
PTPRU-201ENST00000345512 Q8WTZ3 238 aa13.33□□□□□ -0.28
PTPRU-201ENST00000345512 ANAPC16Q96DE5 110 aa13.33□□□□□ -0.28
PTPRU-201ENST00000345512 ZNF331Q9NQX6 463 aaPredicted RBP13.33□□□□□ -0.28
PTPRU-201ENST00000345512 ZNF586Q9NXT0 402 aa13.33□□□□□ -0.28
PTPRU-201ENST00000345512 HAND1O96004 215 aa13.33□□□□□ -0.28
PTPRU-201ENST00000345512 CYC1P08574 325 aa13.33□□□□□ -0.28
PTPRU-201ENST00000345512 RFPL3SP0C7P2 107 aa13.33□□□□□ -0.28
PTPRU-201ENST00000345512 FOSL1P15407 271 aa13.33□□□□□ -0.28
PTPRU-201ENST00000345512 KDF1Q8NAX2 398 aaPredicted RBP13.33□□□□□ -0.28
PTPRU-201ENST00000345512 ZPBPQ9BS86 351 aa13.33□□□□□ -0.28
PTPRU-201ENST00000345512 RBKSQ9H477 322 aa13.33□□□□□ -0.28
PTPRU-201ENST00000345512 PNRC2Q9NPJ4 139 aaKnown RBP13.33□□□□□ -0.28
PTPRU-201ENST00000345512 WIPF3A6NGB9 483 aa13.33□□□□□ -0.28
PTPRU-201ENST00000345512 GYPAP02724 150 aa13.33□□□□□ -0.28
PTPRU-201ENST00000345512 PCGF1Q9BSM1 259 aa13.33□□□□□ -0.28
PTPRU-201ENST00000345512 PRDM14Q9GZV8 571 aa13.33□□□□□ -0.28
PTPRU-201ENST00000345512 K7N7A8 449 aa13.32□□□□□ -0.28
PTPRU-201ENST00000345512 UCP1P25874 307 aa13.32□□□□□ -0.28
PTPRU-201ENST00000345512 TPPP2P59282 170 aa13.32□□□□□ -0.28
PTPRU-201ENST00000345512 CDCP2Q5VXM1 449 aa13.32□□□□□ -0.28
PTPRU-201ENST00000345512 FGFRL1Q8N441 504 aa13.32□□□□□ -0.28
PTPRU-201ENST00000345512 ZNF439Q8NDP4 499 aa13.32□□□□□ -0.28
PTPRU-201ENST00000345512 TREM2Q9NZC2 230 aa13.32□□□□□ -0.28
PTPRU-201ENST00000345512 A0A1W2PPE3 182 aa13.32□□□□□ -0.28
PTPRU-201ENST00000345512 HOXA5P20719 270 aa13.32□□□□□ -0.28
PTPRU-201ENST00000345512 LINC00596Q86U02 117 aa13.32□□□□□ -0.28
PTPRU-201ENST00000345512 OR2M7Q8NG81 312 aa13.32□□□□□ -0.28
PTPRU-201ENST00000345512 OR2J1Q9GZK6 312 aa13.32□□□□□ -0.28
PTPRU-201ENST00000345512 IL36RNQ9UBH0 155 aa13.32□□□□□ -0.28
PTPRU-201ENST00000345512 RFNGQ9Y644 331 aa13.32□□□□□ -0.28
PTPRU-201ENST00000345512 DOCK8Q8NF50 2099 aa13.32□□□□□ -0.28
PTPRU-201ENST00000345512 AESQ08117 197 aa13.32□□□□□ -0.28
PTPRU-201ENST00000345512 RBMXL3Q8N7X1 1067 aaKnown RBP13.32□□□□□ -0.28
PTPRU-201ENST00000345512 SAP25Q8TEE9 199 aa13.32□□□□□ -0.28
PTPRU-201ENST00000345512 IGKV1-12A0A0C4DH73 117 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 LOC102723971A0A1B0GUV8 181 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 IGKV1D-12P01611 117 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 FOLR2P14207 255 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 HOXA6P31267 233 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 MAFAQ8NHW3 353 aaPredicted RBP13.31□□□□□ -0.28
PTPRU-201ENST00000345512 CORO2AQ92828 525 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 DAZAP1Q96EP5 407 aaKnown RBP13.31□□□□□ -0.28
PTPRU-201ENST00000345512 PARD6AQ9NPB6 346 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 CISD1Q9NZ45 108 aaKnown RBP13.31□□□□□ -0.28
PTPRU-201ENST00000345512 SPTA1P02549 2419 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 TNFSF15O95150 251 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 GAMTQ14353 236 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 IGFBP7Q16270 282 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 ZNF385CQ66K41 422 aaPredicted RBP13.31□□□□□ -0.28
PTPRU-201ENST00000345512 MDP1Q86V88 176 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 C17orf82Q86X59 251 aaPredicted RBP13.31□□□□□ -0.28
PTPRU-201ENST00000345512 OR2Z1Q8NG97 314 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 R3HDM4Q96D70 268 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 ZNF552Q9H707 407 aaPredicted RBP13.31□□□□□ -0.28
PTPRU-201ENST00000345512 ZNF581Q9P0T4 197 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 IGLV3-32A0A0A0MS00 114 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 HOXB1P14653 301 aaPredicted RBP13.31□□□□□ -0.28
PTPRU-201ENST00000345512 NDUFB7P17568 137 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 DDTP30046 118 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 TPRX1Q8N7U7 411 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 RCC1LQ96I51 464 aaKnown RBP13.31□□□□□ -0.28
PTPRU-201ENST00000345512 CENPFP49454 3210 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 IGKV1D-13A0A0B4J2D9 117 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 IGKV1-13P0DP09 117 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 LYL1P12980 280 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 CD81P60033 236 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 SSMEM1Q8WWF3 244 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 MSL2Q9HCI7 577 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 PLSCR2Q9NRY7 297 aa13.31□□□□□ -0.28
PTPRU-201ENST00000345512 FCN1O00602 326 aa13.3□□□□□ -0.28
PTPRU-201ENST00000345512 OR2H2O95918 312 aa13.3□□□□□ -0.28
PTPRU-201ENST00000345512 THBS3P49746 956 aa13.3□□□□□ -0.28
PTPRU-201ENST00000345512 P2RX4Q99571 388 aa13.3□□□□□ -0.28
PTPRU-201ENST00000345512 FAM3BP58499 235 aaPredicted RBP13.3□□□□□ -0.28
PTPRU-201ENST00000345512 OR8G5Q8NG78 346 aa13.3□□□□□ -0.28
PTPRU-201ENST00000345512 C1orf147Q96MC9 270 aaPredicted RBP13.3□□□□□ -0.28
PTPRU-201ENST00000345512 ARRDC1-AS1Q9H2J1 176 aa13.3□□□□□ -0.28
PTPRU-201ENST00000345512 HSBP1L1C9JCN9 74 aa13.3□□□□□ -0.28
PTPRU-201ENST00000345512 SSTP61278 116 aa13.3□□□□□ -0.28
PTPRU-201ENST00000345512 UBALD2Q8IYN6 164 aa13.3□□□□□ -0.28
PTPRU-201ENST00000345512 FKBP11Q9NYL4 201 aa13.3□□□□□ -0.28
PTPRU-201ENST00000345512 OOEPA6NGQ2 149 aa13.29□□□□□ -0.28
PTPRU-201ENST00000345512 CEACAM18A8MTB9 384 aa13.29□□□□□ -0.28
PTPRU-201ENST00000345512 KIAA1324LA8MWY0 1029 aaPredicted RBP13.29□□□□□ -0.28
PTPRU-201ENST00000345512 E9PLN8 166 aa13.29□□□□□ -0.28
PTPRU-201ENST00000345512 AGAP20933 346 aa13.29□□□□□ -0.28
PTPRU-201ENST00000345512 TAS2R45P59539 299 aa13.29□□□□□ -0.28
PTPRU-201ENST00000345512 CLDND2Q8NHS1 167 aa13.29□□□□□ -0.28
PTPRU-201ENST00000345512 SLC25A40Q8TBP6 338 aa13.29□□□□□ -0.28
PTPRU-201ENST00000345512 NAT8BQ9UHF3 227 aa13.29□□□□□ -0.28
PTPRU-201ENST00000345512 IGKV1-27A0A075B6S5 117 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms