RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 DTYMKP23919 212 aa16.8■□□□□ 0.28
SMARCB1-202ENST00000344921 IL3RAP26951 378 aa16.8■□□□□ 0.28
SMARCB1-202ENST00000344921 CEACAM6P40199 344 aa16.8■□□□□ 0.28
SMARCB1-202ENST00000344921 ZNF134P52741 427 aa16.8■□□□□ 0.28
SMARCB1-202ENST00000344921 CT45A1Q5HYN5 189 aa16.8■□□□□ 0.28
SMARCB1-202ENST00000344921 CCDC144NLQ6NUI1 221 aa16.8■□□□□ 0.28
SMARCB1-202ENST00000344921 SLC25A48Q6ZT89 311 aaKnown RBP16.8■□□□□ 0.28
SMARCB1-202ENST00000344921 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.8■□□□□ 0.28
SMARCB1-202ENST00000344921 OR2AK2Q8NG84 335 aa16.8■□□□□ 0.28
SMARCB1-202ENST00000344921 OR4A4PQ8NGN8 299 aa16.8■□□□□ 0.28
SMARCB1-202ENST00000344921 CT45A3Q8NHU0 189 aa16.8■□□□□ 0.28
SMARCB1-202ENST00000344921 AUNIPQ9H7T9 357 aa16.8■□□□□ 0.28
SMARCB1-202ENST00000344921 FBN1P35555 2871 aaKnown RBP16.8■□□□□ 0.28
SMARCB1-202ENST00000344921 LY6LH3BQJ8 138 aa16.79■□□□□ 0.28
SMARCB1-202ENST00000344921 RGS5O15539 181 aa16.79■□□□□ 0.28
SMARCB1-202ENST00000344921 GSTT2P0CG29 244 aa16.79■□□□□ 0.28
SMARCB1-202ENST00000344921 GSTT2BP0CG30 244 aa16.79■□□□□ 0.28
SMARCB1-202ENST00000344921 ZNF439Q8NDP4 499 aa16.79■□□□□ 0.28
SMARCB1-202ENST00000344921 DYNC2LI1Q8TCX1 351 aa16.79■□□□□ 0.28
SMARCB1-202ENST00000344921 DGCR14Q96DF8 476 aaKnown RBP16.79■□□□□ 0.28
SMARCB1-202ENST00000344921 ABHD14AQ9BUJ0 271 aa16.79■□□□□ 0.28
SMARCB1-202ENST00000344921 C19orf24Q9BVV8 132 aa16.79■□□□□ 0.28
SMARCB1-202ENST00000344921 OR1A1Q9P1Q5 309 aa16.79■□□□□ 0.28
SMARCB1-202ENST00000344921 MRPS7Q9Y2R9 242 aaKnown RBP16.79■□□□□ 0.28
SMARCB1-202ENST00000344921 FAM181BA6NEQ2 426 aa16.79■□□□□ 0.28
SMARCB1-202ENST00000344921 OOSP1A8MZH6 123 aa16.79■□□□□ 0.28
SMARCB1-202ENST00000344921 BET1O15155 118 aa16.79■□□□□ 0.28
SMARCB1-202ENST00000344921 PTHLHP12272 177 aa16.79■□□□□ 0.28
SMARCB1-202ENST00000344921 ELK1P19419 428 aa16.79■□□□□ 0.28
SMARCB1-202ENST00000344921 BRS3P32247 399 aa16.79■□□□□ 0.28
SMARCB1-202ENST00000344921 LYG1Q8N1E2 194 aa16.79■□□□□ 0.28
SMARCB1-202ENST00000344921 MDFIQ99750 246 aa16.79■□□□□ 0.28
SMARCB1-202ENST00000344921 RSL24D1Q9UHA3 163 aaKnown RBP16.79■□□□□ 0.28
SMARCB1-202ENST00000344921 TAS2R20P59543 309 aa16.78■□□□□ 0.28
SMARCB1-202ENST00000344921 DIAPH2-AS1Q14236 149 aa16.78■□□□□ 0.28
SMARCB1-202ENST00000344921 SRSF7Q16629 238 aaKnown RBP eCLIP16.78■□□□□ 0.28
SMARCB1-202ENST00000344921 PTTG2Q9NZH5 202 aa16.78■□□□□ 0.28
SMARCB1-202ENST00000344921 CCDC59Q9P031 241 aaKnown RBP16.78■□□□□ 0.28
SMARCB1-202ENST00000344921 HSD17B6O14756 317 aa16.77■□□□□ 0.28
SMARCB1-202ENST00000344921 SSX5O60225 188 aa16.77■□□□□ 0.28
SMARCB1-202ENST00000344921 GPR137BO60478 399 aa16.77■□□□□ 0.28
SMARCB1-202ENST00000344921 REG1BP48304 166 aa16.77■□□□□ 0.28
SMARCB1-202ENST00000344921 RAB7AP51149 207 aa16.77■□□□□ 0.28
SMARCB1-202ENST00000344921 IGSF11Q5DX21 431 aa16.77■□□□□ 0.28
SMARCB1-202ENST00000344921 OR10J5Q8NHC4 309 aa16.77■□□□□ 0.28
SMARCB1-202ENST00000344921 IGKV1-6A0A0C4DH72 117 aa16.76■□□□□ 0.27
SMARCB1-202ENST00000344921 GAPDHP04406 335 aaKnown RBP16.76■□□□□ 0.27
SMARCB1-202ENST00000344921 LPLP06858 475 aa16.76■□□□□ 0.27
SMARCB1-202ENST00000344921 CD24P25063 80 aa16.76■□□□□ 0.27
SMARCB1-202ENST00000344921 DYNLT3P51808 116 aa16.76■□□□□ 0.27
SMARCB1-202ENST00000344921 HERPUD1Q15011 391 aa16.76■□□□□ 0.27
SMARCB1-202ENST00000344921 PIFOQ8TCI5 191 aa16.76■□□□□ 0.27
SMARCB1-202ENST00000344921 EDARADDQ8WWZ3 215 aa16.76■□□□□ 0.27
SMARCB1-202ENST00000344921 GCDHQ92947 438 aaPredicted RBP16.76■□□□□ 0.27
SMARCB1-202ENST00000344921 GINS4Q9BRT9 223 aa16.76■□□□□ 0.27
SMARCB1-202ENST00000344921 IGKV1D-8A0A087WSZ0 117 aa16.76■□□□□ 0.27
SMARCB1-202ENST00000344921 LY6G6FQ5SQ64 297 aa16.76■□□□□ 0.27
SMARCB1-202ENST00000344921 Q6ZS49 121 aa16.76■□□□□ 0.27
SMARCB1-202ENST00000344921 RBM38Q9H0Z9 239 aaKnown RBP16.76■□□□□ 0.27
SMARCB1-202ENST00000344921 PITPNC1Q9UKF7 332 aa16.76■□□□□ 0.27
SMARCB1-202ENST00000344921 MEIS3P1A6NDR6 274 aa16.75■□□□□ 0.27
SMARCB1-202ENST00000344921 ST8SIA5O15466 376 aa16.75■□□□□ 0.27
SMARCB1-202ENST00000344921 FCER2P06734 321 aa16.75■□□□□ 0.27
SMARCB1-202ENST00000344921 DHRS7BQ6IAN0 325 aaPredicted RBP16.75■□□□□ 0.27
SMARCB1-202ENST00000344921 MOB3BQ86TA1 216 aa16.75■□□□□ 0.27
SMARCB1-202ENST00000344921 OR8H3Q8N146 312 aa16.75■□□□□ 0.27
SMARCB1-202ENST00000344921 GVQW1Q8N7I0 195 aa16.75■□□□□ 0.27
SMARCB1-202ENST00000344921 CAPSLQ8WWF8 208 aa16.75■□□□□ 0.27
SMARCB1-202ENST00000344921 C6orf62Q9GZU0 229 aaPredicted RBP16.75■□□□□ 0.27
SMARCB1-202ENST00000344921 RDH8Q9NYR8 311 aa16.75■□□□□ 0.27
SMARCB1-202ENST00000344921 TCF19Q9Y242 345 aa16.75■□□□□ 0.27
SMARCB1-202ENST00000344921 CTDSP2O14595 271 aa16.74■□□□□ 0.27
SMARCB1-202ENST00000344921 TIMM23O14925 209 aa16.74■□□□□ 0.27
SMARCB1-202ENST00000344921 PRSS3P35030 304 aa16.74■□□□□ 0.27
SMARCB1-202ENST00000344921 CBX5P45973 191 aa16.74■□□□□ 0.27
SMARCB1-202ENST00000344921 ZNF816Q0VGE8 651 aaPredicted RBP16.74■□□□□ 0.27
SMARCB1-202ENST00000344921 TMEM219Q86XT9 240 aa16.74■□□□□ 0.27
SMARCB1-202ENST00000344921 TGIF2LXQ8IUE1 241 aa16.74■□□□□ 0.27
SMARCB1-202ENST00000344921 SNX29P2Q8IUI4 249 aa16.74■□□□□ 0.27
SMARCB1-202ENST00000344921 BEST4Q8NFU0 473 aa16.74■□□□□ 0.27
SMARCB1-202ENST00000344921 OR56B4Q8NH76 319 aa16.74■□□□□ 0.27
SMARCB1-202ENST00000344921 TAF15Q92804 592 aaKnown RBP eCLIP16.74■□□□□ 0.27
SMARCB1-202ENST00000344921 DCUN1D5Q9BTE7 237 aa16.74■□□□□ 0.27
SMARCB1-202ENST00000344921 CABLES2Q9BTV7 478 aa16.74■□□□□ 0.27
SMARCB1-202ENST00000344921 PARP12Q9H0J9 701 aaKnown RBP16.74■□□□□ 0.27
SMARCB1-202ENST00000344921 IFT46Q9NQC8 304 aa16.74■□□□□ 0.27
SMARCB1-202ENST00000344921 EXTL2Q9UBQ6 330 aa16.74■□□□□ 0.27
SMARCB1-202ENST00000344921 ADAM30Q9UKF2 790 aa16.74■□□□□ 0.27
SMARCB1-202ENST00000344921 TRBV6-7A0A0A0MS04 114 aa16.73■□□□□ 0.27
SMARCB1-202ENST00000344921 IGHV1-3A0A0C4DH29 117 aa16.73■□□□□ 0.27
SMARCB1-202ENST00000344921 RPL15P61313 204 aaKnown RBP16.73■□□□□ 0.27
SMARCB1-202ENST00000344921 DRAM1Q8N682 238 aa16.73■□□□□ 0.27
SMARCB1-202ENST00000344921 RTN4IP1Q8WWV3 396 aaPredicted RBP16.73■□□□□ 0.27
SMARCB1-202ENST00000344921 ST6GALNAC6Q969X2 333 aa16.73■□□□□ 0.27
SMARCB1-202ENST00000344921 C11orf54Q9H0W9 315 aaPredicted RBP16.73■□□□□ 0.27
SMARCB1-202ENST00000344921 RAB18Q9NP72 206 aa16.73■□□□□ 0.27
SMARCB1-202ENST00000344921 PIPOXQ9P0Z9 390 aa16.73■□□□□ 0.27
SMARCB1-202ENST00000344921 ANXA10Q9UJ72 324 aa16.73■□□□□ 0.27
SMARCB1-202ENST00000344921 A0A1W2PPI3 338 aa16.73■□□□□ 0.27
SMARCB1-202ENST00000344921 ZNF701M0R085 212 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms