RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 CD1BP29016 333 aa11.41□□□□□ -0.58
HMGN3-202ENST00000344726 OR10A3P58181 314 aa11.41□□□□□ -0.58
HMGN3-202ENST00000344726 C2orf76Q3KRA6 126 aa11.41□□□□□ -0.58
HMGN3-202ENST00000344726 HES5Q5TA89 166 aa11.41□□□□□ -0.58
HMGN3-202ENST00000344726 STEAP3Q658P3 488 aa11.41□□□□□ -0.58
HMGN3-202ENST00000344726 CD200R1LQ6Q8B3 271 aa11.41□□□□□ -0.58
HMGN3-202ENST00000344726 TGIF2LXQ8IUE1 241 aa11.41□□□□□ -0.58
HMGN3-202ENST00000344726 FAM3DQ96BQ1 224 aa11.41□□□□□ -0.58
HMGN3-202ENST00000344726 NOL4LQ96MY1 436 aaPredicted RBP11.41□□□□□ -0.58
HMGN3-202ENST00000344726 ABHD14AQ9BUJ0 271 aa11.41□□□□□ -0.58
HMGN3-202ENST00000344726 PLEKHJ1Q9NW61 149 aa11.41□□□□□ -0.58
HMGN3-202ENST00000344726 AK3Q9UIJ7 227 aa11.41□□□□□ -0.58
HMGN3-202ENST00000344726 V9GY05 133 aa11.41□□□□□ -0.58
HMGN3-202ENST00000344726 TMEM272A0A1B0GTI8 110 aa11.4□□□□□ -0.58
HMGN3-202ENST00000344726 YPEL1O60688 119 aa11.4□□□□□ -0.58
HMGN3-202ENST00000344726 VEGFCP49767 419 aa11.4□□□□□ -0.58
HMGN3-202ENST00000344726 SPARTQ8N0X7 666 aa11.4□□□□□ -0.58
HMGN3-202ENST00000344726 Q8N9W7 124 aa11.4□□□□□ -0.58
HMGN3-202ENST00000344726 OR2T10Q8NGZ9 312 aa11.4□□□□□ -0.58
HMGN3-202ENST00000344726 GALMQ96C23 342 aa11.4□□□□□ -0.58
HMGN3-202ENST00000344726 YPEL2Q96QA6 119 aa11.4□□□□□ -0.58
HMGN3-202ENST00000344726 URM1Q9BTM9 101 aaKnown RBP11.4□□□□□ -0.58
HMGN3-202ENST00000344726 LINC00527Q9UJ94 153 aa11.4□□□□□ -0.58
HMGN3-202ENST00000344726 TRBV6-6A0A0A6YYG2 114 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 TRAV1-2A0A0B4J238 106 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 TRDV1A0A1B0GX56 115 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 TCRBV4S1A1TA0A5B7 111 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 NCBP2LA6PVI3 153 aaKnown RBP11.39□□□□□ -0.59
HMGN3-202ENST00000344726 TXNL1O43396 289 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 LANCL1O43813 399 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 MOSP00540 346 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 IGHG2P01859 326 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 OR3A3P47888 321 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 F2RL1P55085 397 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 LSAMPQ13449 338 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 PLAC9Q5JTB6 97 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 LY6G6FQ5SQ64 297 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 UBE2UQ5VVX9 321 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 ZNF329Q86UD4 541 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 NR2C2APQ86WQ0 139 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 OR4F17Q8NGA8 305 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 SETD6Q8TBK2 473 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 IL1F10Q8WWZ1 152 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 ARHGAP5-AS1Q96IT6 56 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 OR4F4Q96R69 305 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 PECRQ9BY49 303 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 PARP12Q9H0J9 701 aaKnown RBP11.39□□□□□ -0.59
HMGN3-202ENST00000344726 IFI27L2Q9H2X8 130 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 CHMP1AQ9HD42 196 aaPredicted RBP11.39□□□□□ -0.59
HMGN3-202ENST00000344726 STEAP1Q9UHE8 339 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 HSF4Q9ULV5 492 aa11.39□□□□□ -0.59
HMGN3-202ENST00000344726 TSSC4Q9Y5U2 329 aaPredicted RBP11.39□□□□□ -0.59
HMGN3-202ENST00000344726 PSMB11A5LHX3 300 aa11.38□□□□□ -0.59
HMGN3-202ENST00000344726 MRPS14O60783 128 aaKnown RBP11.38□□□□□ -0.59
HMGN3-202ENST00000344726 C22orf42Q6IC83 251 aa11.38□□□□□ -0.59
HMGN3-202ENST00000344726 SLC35E3Q7Z769 313 aa11.38□□□□□ -0.59
HMGN3-202ENST00000344726 OR4X2Q8NGF9 303 aa11.38□□□□□ -0.59
HMGN3-202ENST00000344726 RITA1Q96K30 269 aa11.38□□□□□ -0.59
HMGN3-202ENST00000344726 S1PR3Q99500 378 aa11.38□□□□□ -0.59
HMGN3-202ENST00000344726 MRPL20Q9BYC9 149 aaKnown RBP11.38□□□□□ -0.59
HMGN3-202ENST00000344726 ABCG5Q9H222 651 aa11.38□□□□□ -0.59
HMGN3-202ENST00000344726 LIN7CQ9NUP9 197 aaKnown RBP11.38□□□□□ -0.59
HMGN3-202ENST00000344726 LRRC42Q9Y546 428 aa11.38□□□□□ -0.59
HMGN3-202ENST00000344726 SAA2-SAA4A0A096LPE2 208 aa11.37□□□□□ -0.59
HMGN3-202ENST00000344726 A0A0B4J203 849 aa11.37□□□□□ -0.59
HMGN3-202ENST00000344726 IFITM5A6NNB3 132 aa11.37□□□□□ -0.59
HMGN3-202ENST00000344726 SERPINE3A8MV23 424 aa11.37□□□□□ -0.59
HMGN3-202ENST00000344726 ST8SIA5O15466 376 aa11.37□□□□□ -0.59
HMGN3-202ENST00000344726 SAA2P0DJI9 122 aaPredicted RBP11.37□□□□□ -0.59
HMGN3-202ENST00000344726 GPR12P47775 334 aa11.37□□□□□ -0.59
HMGN3-202ENST00000344726 MOGAT2Q3SYC2 334 aa11.37□□□□□ -0.59
HMGN3-202ENST00000344726 ZNF833PQ6ZTB9 187 aa11.37□□□□□ -0.59
HMGN3-202ENST00000344726 MOB1BQ7L9L4 216 aa11.37□□□□□ -0.59
HMGN3-202ENST00000344726 FAM71E2Q8N5Q1 922 aa11.37□□□□□ -0.59
HMGN3-202ENST00000344726 WFDC9Q8NEX5 89 aa11.37□□□□□ -0.59
HMGN3-202ENST00000344726 PHF21AQ96BD5 680 aa11.37□□□□□ -0.59
HMGN3-202ENST00000344726 NABP2Q9BQ15 211 aa11.37□□□□□ -0.59
HMGN3-202ENST00000344726 HSPB9Q9BQS6 159 aa11.37□□□□□ -0.59
HMGN3-202ENST00000344726 ZNF251Q9BRH9 671 aa11.37□□□□□ -0.59
HMGN3-202ENST00000344726 Q9N2K0 584 aa11.37□□□□□ -0.59
HMGN3-202ENST00000344726 ABRACLQ9P1F3 81 aa11.37□□□□□ -0.59
HMGN3-202ENST00000344726 OR1A1Q9P1Q5 309 aa11.37□□□□□ -0.59
HMGN3-202ENST00000344726 KCNK7Q9Y2U2 307 aa11.37□□□□□ -0.59
HMGN3-202ENST00000344726 SMIM30A4D0T7 59 aa11.36□□□□□ -0.59
HMGN3-202ENST00000344726 PDCD5O14737 125 aa11.36□□□□□ -0.59
HMGN3-202ENST00000344726 RGS11O94810 467 aa11.36□□□□□ -0.59
HMGN3-202ENST00000344726 SCTP09683 121 aa11.36□□□□□ -0.59
HMGN3-202ENST00000344726 IGLL1P15814 213 aa11.36□□□□□ -0.59
HMGN3-202ENST00000344726 RAB3BP20337 219 aa11.36□□□□□ -0.59
HMGN3-202ENST00000344726 GALP22466 123 aa11.36□□□□□ -0.59
HMGN3-202ENST00000344726 CNTFRP26992 372 aa11.36□□□□□ -0.59
HMGN3-202ENST00000344726 PSMB9P28065 219 aa11.36□□□□□ -0.59
HMGN3-202ENST00000344726 PSMD7P51665 324 aa11.36□□□□□ -0.59
HMGN3-202ENST00000344726 HLA-DRB3P79483 266 aa11.36□□□□□ -0.59
HMGN3-202ENST00000344726 KHDC1LQ5JSQ8 128 aa11.36□□□□□ -0.59
HMGN3-202ENST00000344726 C18orf65Q6ZTR6 163 aa11.36□□□□□ -0.59
HMGN3-202ENST00000344726 STPG2Q8N412 459 aa11.36□□□□□ -0.59
HMGN3-202ENST00000344726 OR2AK2Q8NG84 335 aa11.36□□□□□ -0.59
HMGN3-202ENST00000344726 OR56B1Q8NGI3 324 aa11.36□□□□□ -0.59
HMGN3-202ENST00000344726 CHPT1Q8WUD6 406 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms