RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 OR10A7Q8NGE5 316 aa14.06□□□□□ -0.16
SMARCA4-201ENST00000344626 C17orf50Q8WW18 174 aa14.06□□□□□ -0.16
SMARCA4-201ENST00000344626 POM121Q96HA1 1249 aa14.06□□□□□ -0.16
SMARCA4-201ENST00000344626 SLC2A9Q9NRM0 540 aa14.06□□□□□ -0.16
SMARCA4-201ENST00000344626 HPRT1P00492 218 aa14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 ZNF66Q6ZN08 573 aa14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 SMCO4Q9NRQ5 59 aa14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 KPTNQ9Y664 436 aa14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 PIEZO2Q9H5I5 2752 aa14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 FER1L5A0AVI2 2057 aa14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 KIF26BQ2KJY2 2108 aa14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 ZNF729A6NN14 1252 aaPredicted RBP14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 SYNGR2O43760 224 aa14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 THY1P04216 161 aa14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 TOR2AQ5JU69 321 aa14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 PHYHD1Q5SRE7 291 aa14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 DYRK2Q92630 601 aa14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 CALYQ9NYX4 217 aa14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 TCTEX1D1Q8N7M0 179 aa14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 IL24Q13007 206 aa14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 OR2C3Q8N628 320 aa14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 TRBV5-7A0A0A0MS05 114 aa14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 IGHV3-72A0A0B4J1Y9 119 aa14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 MST1P26927 711 aa14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 ERVS71-1P61550 626 aa14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 DTX1Q86Y01 620 aa14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 ZNF426Q9BUY5 554 aa14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 PATZ1Q9HBE1 687 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-201ENST00000344626 DUXBA0A1W2PPF3 345 aa14.04□□□□□ -0.16
SMARCA4-201ENST00000344626 TXNL1O43396 289 aa14.04□□□□□ -0.16
SMARCA4-201ENST00000344626 METTL15P1P0C7V9 234 aa14.04□□□□□ -0.16
SMARCA4-201ENST00000344626 RAB4AP20338 218 aa14.04□□□□□ -0.16
SMARCA4-201ENST00000344626 PCSK4Q6UW60 755 aa14.04□□□□□ -0.16
SMARCA4-201ENST00000344626 DTD1Q8TEA8 209 aa14.04□□□□□ -0.16
SMARCA4-201ENST00000344626 Q8WTZ3 238 aa14.04□□□□□ -0.16
SMARCA4-201ENST00000344626 ZNF331Q9NQX6 463 aaPredicted RBP14.04□□□□□ -0.16
SMARCA4-201ENST00000344626 NUPL2O15504 423 aaKnown RBP14.04□□□□□ -0.16
SMARCA4-201ENST00000344626 SPINK9Q5DT21 86 aa14.04□□□□□ -0.16
SMARCA4-201ENST00000344626 FFAR4Q5NUL3 377 aa14.04□□□□□ -0.16
SMARCA4-201ENST00000344626 WASHC3Q9Y3C0 194 aa14.04□□□□□ -0.16
SMARCA4-201ENST00000344626 PLXNA4Q9HCM2 1894 aa14.04□□□□□ -0.16
SMARCA4-201ENST00000344626 SH2D2AQ9NP31 389 aa14.04□□□□□ -0.16
SMARCA4-201ENST00000344626 OR1A1Q9P1Q5 309 aa14.04□□□□□ -0.16
SMARCA4-201ENST00000344626 OR13C7P0DN81 318 aa14.04□□□□□ -0.16
SMARCA4-201ENST00000344626 MDS2Q8NDY4 140 aa14.04□□□□□ -0.16
SMARCA4-201ENST00000344626 OR9G1Q8NH87 305 aa14.04□□□□□ -0.16
SMARCA4-201ENST00000344626 APELAP0DMC3 54 aa14.03□□□□□ -0.16
SMARCA4-201ENST00000344626 LYZP61626 148 aa14.03□□□□□ -0.16
SMARCA4-201ENST00000344626 RHOBP62745 196 aa14.03□□□□□ -0.16
SMARCA4-201ENST00000344626 HAGHQ16775 308 aa14.03□□□□□ -0.16
SMARCA4-201ENST00000344626 CLEC18BQ6UXF7 455 aa14.03□□□□□ -0.16
SMARCA4-201ENST00000344626 SCMH1Q96GD3 660 aa14.03□□□□□ -0.16
SMARCA4-201ENST00000344626 GSX2Q9BZM3 304 aa14.03□□□□□ -0.16
SMARCA4-201ENST00000344626 CBLN4Q9NTU7 201 aa14.03□□□□□ -0.16
SMARCA4-201ENST00000344626 HSF4Q9ULV5 492 aa14.03□□□□□ -0.16
SMARCA4-201ENST00000344626 EFNB2P52799 333 aa14.03□□□□□ -0.16
SMARCA4-201ENST00000344626 CXorf58Q96LI9 332 aa14.03□□□□□ -0.16
SMARCA4-201ENST00000344626 LPAR5Q9H1C0 372 aa14.03□□□□□ -0.16
SMARCA4-201ENST00000344626 IGKV3-7A0A075B6H7 116 aa14.03□□□□□ -0.16
SMARCA4-201ENST00000344626 A0A1B0GU03 582 aa14.03□□□□□ -0.16
SMARCA4-201ENST00000344626 OR5C1Q8NGR4 320 aa14.03□□□□□ -0.16
SMARCA4-201ENST00000344626 ZNF837Q96EG3 531 aaPredicted RBP14.03□□□□□ -0.16
SMARCA4-201ENST00000344626 SAMD10Q9BYL1 202 aa14.03□□□□□ -0.16
SMARCA4-201ENST00000344626 SOX15O60248 233 aa14.03□□□□□ -0.16
SMARCA4-201ENST00000344626 OR5I1Q13606 314 aa14.03□□□□□ -0.16
SMARCA4-201ENST00000344626 RAB32Q13637 225 aa14.03□□□□□ -0.16
SMARCA4-201ENST00000344626 DYNLRB2Q8TF09 96 aa14.03□□□□□ -0.16
SMARCA4-201ENST00000344626 CD37P11049 281 aa14.02□□□□□ -0.16
SMARCA4-201ENST00000344626 ZNF260Q3ZCT1 412 aa14.02□□□□□ -0.16
SMARCA4-201ENST00000344626 LRRC75AQ8NAA5 344 aa14.02□□□□□ -0.16
SMARCA4-201ENST00000344626 C1QTNF5Q9BXJ0 243 aa14.02□□□□□ -0.16
SMARCA4-201ENST00000344626 CLEC7AQ9BXN2 247 aa14.02□□□□□ -0.16
SMARCA4-201ENST00000344626 NAV3Q8IVL0 2385 aa14.02□□□□□ -0.16
SMARCA4-201ENST00000344626 RAB19A4D1S5 217 aa14.02□□□□□ -0.16
SMARCA4-201ENST00000344626 ZNF385CQ66K41 422 aaPredicted RBP14.02□□□□□ -0.16
SMARCA4-201ENST00000344626 NCR3LG1Q68D85 454 aa14.02□□□□□ -0.16
SMARCA4-201ENST00000344626 PRSS54Q6PEW0 395 aa14.02□□□□□ -0.16
SMARCA4-201ENST00000344626 TMEM123Q8N131 208 aa14.02□□□□□ -0.16
SMARCA4-201ENST00000344626 WFIKKN1Q96NZ8 548 aa14.02□□□□□ -0.16
SMARCA4-201ENST00000344626 HDHD3Q9BSH5 251 aaPredicted RBP14.02□□□□□ -0.16
SMARCA4-201ENST00000344626 JPT1Q9UK76 154 aa14.02□□□□□ -0.16
SMARCA4-201ENST00000344626 CELA3BP08861 270 aa14.02□□□□□ -0.17
SMARCA4-201ENST00000344626 PAFAH1B2P68402 229 aa14.02□□□□□ -0.17
SMARCA4-201ENST00000344626 RTN4RQ9BZR6 473 aa14.02□□□□□ -0.17
SMARCA4-201ENST00000344626 A0A0G2JNJ9 132 aa14.02□□□□□ -0.17
SMARCA4-201ENST00000344626 KLK2P20151 261 aa14.02□□□□□ -0.17
SMARCA4-201ENST00000344626 CEBPDP49716 269 aaPredicted RBP14.02□□□□□ -0.17
SMARCA4-201ENST00000344626 P2RX3P56373 397 aa14.02□□□□□ -0.17
SMARCA4-201ENST00000344626 FBLIM1Q8WUP2 373 aa14.02□□□□□ -0.17
SMARCA4-201ENST00000344626 Q9UFV3 132 aa14.02□□□□□ -0.17
SMARCA4-201ENST00000344626 LYNX1G3V0Z9 82 aa14.01□□□□□ -0.17
SMARCA4-201ENST00000344626 LYNX1P0DP58 116 aa14.01□□□□□ -0.17
SMARCA4-201ENST00000344626 RPS10P46783 165 aaKnown RBP14.01□□□□□ -0.17
SMARCA4-201ENST00000344626 ABHD12Q8N2K0 398 aa14.01□□□□□ -0.17
SMARCA4-201ENST00000344626 BVESQ8NE79 360 aa14.01□□□□□ -0.17
SMARCA4-201ENST00000344626 MRPL24Q96A35 216 aaKnown RBP14.01□□□□□ -0.17
SMARCA4-201ENST00000344626 PFDN5Q99471 154 aa14.01□□□□□ -0.17
SMARCA4-201ENST00000344626 ZNF462Q96JM2 2506 aa14.01□□□□□ -0.17
SMARCA4-201ENST00000344626 ZNF727A8MUV8 499 aa14.01□□□□□ -0.17
SMARCA4-201ENST00000344626 CDS2O95674 445 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms