RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 HIST1H2BCP62807 126 aa20.34■□□□□ 0.85
NELFB-201ENST00000343053 HIST2H2BEQ16778 126 aa20.34■□□□□ 0.85
NELFB-201ENST00000343053 HIST2H2BFQ5QNW6 126 aaPredicted RBP20.34■□□□□ 0.85
NELFB-201ENST00000343053 FAM90A2PQ658T7 463 aa20.34■□□□□ 0.85
NELFB-201ENST00000343053 CXorf67Q86X51 503 aaPredicted RBP20.34■□□□□ 0.85
NELFB-201ENST00000343053 HIST1H2BHQ93079 126 aa20.34■□□□□ 0.85
NELFB-201ENST00000343053 IL22RA2Q969J5 263 aa20.34■□□□□ 0.85
NELFB-201ENST00000343053 HIST1H2BNQ99877 126 aa20.34■□□□□ 0.85
NELFB-201ENST00000343053 HIST1H2BMQ99879 126 aa20.34■□□□□ 0.85
NELFB-201ENST00000343053 A0A1W2PNU3 283 aaPredicted RBP20.33■□□□□ 0.85
NELFB-201ENST00000343053 ZNF585BQ52M93 769 aa20.33■□□□□ 0.85
NELFB-201ENST00000343053 PYY3Q5JQD4 70 aa20.33■□□□□ 0.85
NELFB-201ENST00000343053 ZNF525Q8N782 197 aa20.33■□□□□ 0.85
NELFB-201ENST00000343053 RCC1LQ96I51 464 aaKnown RBP20.33■□□□□ 0.85
NELFB-201ENST00000343053 CEBPZOSA8MTT3 80 aa20.33■□□□□ 0.84
NELFB-201ENST00000343053 CDIPTO14735 213 aa20.33■□□□□ 0.84
NELFB-201ENST00000343053 MAS1LP35410 378 aa20.33■□□□□ 0.84
NELFB-201ENST00000343053 KHDC3LQ587J8 217 aa20.33■□□□□ 0.84
NELFB-201ENST00000343053 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.33■□□□□ 0.84
NELFB-201ENST00000343053 C1QL4Q86Z23 238 aa20.33■□□□□ 0.84
NELFB-201ENST00000343053 RAB40CQ96S21 281 aa20.33■□□□□ 0.84
NELFB-201ENST00000343053 OR51I2Q9H344 312 aa20.33■□□□□ 0.84
NELFB-201ENST00000343053 C9orf152Q5JTZ5 239 aa20.32■□□□□ 0.84
NELFB-201ENST00000343053 Q6P435 159 aa20.32■□□□□ 0.84
NELFB-201ENST00000343053 ZNF808Q8N4W9 903 aaPredicted RBP20.32■□□□□ 0.84
NELFB-201ENST00000343053 BCL2P10415 239 aa20.32■□□□□ 0.84
NELFB-201ENST00000343053 HOXA5P20719 270 aa20.32■□□□□ 0.84
NELFB-201ENST00000343053 CEACAM6P40199 344 aa20.32■□□□□ 0.84
NELFB-201ENST00000343053 GLIPR1P48060 266 aa20.32■□□□□ 0.84
NELFB-201ENST00000343053 OR8G1Q15617 311 aa20.32■□□□□ 0.84
NELFB-201ENST00000343053 CDX2Q99626 313 aaPredicted RBP20.32■□□□□ 0.84
NELFB-201ENST00000343053 TECTAO75443 2155 aa20.32■□□□□ 0.84
NELFB-201ENST00000343053 COL27A1Q8IZC6 1860 aaPredicted RBP20.32■□□□□ 0.84
NELFB-201ENST00000343053 NDUFS6O75380 124 aaKnown RBP20.31■□□□□ 0.84
NELFB-201ENST00000343053 GRPP07492 148 aa20.31■□□□□ 0.84
NELFB-201ENST00000343053 ZNF880Q6PDB4 577 aa20.31■□□□□ 0.84
NELFB-201ENST00000343053 CABLES2Q9BTV7 478 aa20.31■□□□□ 0.84
NELFB-201ENST00000343053 OR2J1Q9GZK6 312 aa20.31■□□□□ 0.84
NELFB-201ENST00000343053 RIMS4Q9H426 269 aaPredicted RBP20.31■□□□□ 0.84
NELFB-201ENST00000343053 COX5BP10606 129 aa20.31■□□□□ 0.84
NELFB-201ENST00000343053 SCCPDHQ8NBX0 429 aa20.31■□□□□ 0.84
NELFB-201ENST00000343053 SNIP1Q8TAD8 396 aaKnown RBP20.31■□□□□ 0.84
NELFB-201ENST00000343053 IL17BQ9UHF5 180 aa20.31■□□□□ 0.84
NELFB-201ENST00000343053 OR5B21A6NL26 309 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 RAMP3O60896 148 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 CD55P08174 381 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 DEFA4P12838 97 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 MEOX1P50221 254 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 SPINK9Q5DT21 86 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 ATP1A1-AS1Q5TC04 95 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 OR4C12Q96R67 309 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 GPR61Q9BZJ8 451 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 MPC1Q9Y5U8 109 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 SVILO95425 2214 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 NXPH2O95156 264 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 IGHV2-70P01814 119 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 HOXA6P31267 233 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 ZNF816Q0VGE8 651 aaPredicted RBP20.3■□□□□ 0.84
NELFB-201ENST00000343053 DCAF10Q5QP82 559 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 DRAM1Q8N682 238 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 OR10D4PQ8NGN7 298 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 POM121Q96HA1 1249 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 A0A087WWC5 75 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 J3QT63 122 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 CLDN1O95832 211 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 SOD3P08294 240 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 IDH3GP51553 393 aaPredicted RBP20.3■□□□□ 0.84
NELFB-201ENST00000343053 SLC35E3Q7Z769 313 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 UBALD2Q8IYN6 164 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 RBKSQ9H477 322 aa20.3■□□□□ 0.84
NELFB-201ENST00000343053 KRASP01116 189 aa20.29■□□□□ 0.84
NELFB-201ENST00000343053 S100PP25815 95 aa20.29■□□□□ 0.84
NELFB-201ENST00000343053 NECAP1Q8NC96 275 aa20.29■□□□□ 0.84
NELFB-201ENST00000343053 S100A2P29034 98 aa20.29■□□□□ 0.84
NELFB-201ENST00000343053 CDX1P47902 265 aaPredicted RBP20.29■□□□□ 0.84
NELFB-201ENST00000343053 LINC00205P59089 165 aa20.29■□□□□ 0.84
NELFB-201ENST00000343053 RNPS1Q15287 305 aaKnown RBP20.29■□□□□ 0.84
NELFB-201ENST00000343053 CLEC12BQ2HXU8 276 aa20.29■□□□□ 0.84
NELFB-201ENST00000343053 ACP1P24666 158 aa20.28■□□□□ 0.84
NELFB-201ENST00000343053 MDH2P40926 338 aaKnown RBP20.28■□□□□ 0.84
NELFB-201ENST00000343053 PEAR1Q5VY43 1037 aaPredicted RBP20.28■□□□□ 0.84
NELFB-201ENST00000343053 FRZBQ92765 325 aa20.28■□□□□ 0.84
NELFB-201ENST00000343053 TMEM9BQ9NQ34 198 aa20.28■□□□□ 0.84
NELFB-201ENST00000343053 MAP1LC3B2A6NCE7 125 aa20.28■□□□□ 0.84
NELFB-201ENST00000343053 IGKV1D-33P01593 117 aa20.28■□□□□ 0.84
NELFB-201ENST00000343053 IGKV1-33P01594 117 aa20.28■□□□□ 0.84
NELFB-201ENST00000343053 G6PCP35575 357 aa20.28■□□□□ 0.84
NELFB-201ENST00000343053 BTNL3Q6UXE8 466 aa20.28■□□□□ 0.84
NELFB-201ENST00000343053 GCNT2Q8N0V5 402 aa20.28■□□□□ 0.84
NELFB-201ENST00000343053 WDYHV1Q96HA8 205 aa20.28■□□□□ 0.84
NELFB-201ENST00000343053 MAP1LC3BQ9GZQ8 125 aa20.28■□□□□ 0.84
NELFB-201ENST00000343053 WNT9BO14905 357 aa20.27■□□□□ 0.84
NELFB-201ENST00000343053 NKX6-1P78426 367 aaPredicted RBP20.27■□□□□ 0.84
NELFB-201ENST00000343053 ZNF497Q6ZNH5 498 aa20.27■□□□□ 0.84
NELFB-201ENST00000343053 ZNF826PQ6ZT77 177 aa20.27■□□□□ 0.84
NELFB-201ENST00000343053 LINC00596Q86U02 117 aa20.27■□□□□ 0.84
NELFB-201ENST00000343053 OR1L1Q8NH94 360 aa20.27■□□□□ 0.84
NELFB-201ENST00000343053 CA5BP1Q8WTZ4 195 aa20.27■□□□□ 0.84
NELFB-201ENST00000343053 FAM210BQ96KR6 192 aa20.27■□□□□ 0.84
NELFB-201ENST00000343053 SLC25A22Q9H936 323 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms