RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 HSD17B10Q99714 261 aaKnown RBP6.19□□□□□ -1.42
VCAN-202ENST00000342785 TM2D1Q9BX74 207 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 SLC35D1Q9NTN3 355 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 MDC1Q14676 2089 aaKnown RBP6.19□□□□□ -1.42
VCAN-202ENST00000342785 SCN5AQ14524 2016 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 hCG_38984A0A1B0GV85 526 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 RRP8O43159 456 aaKnown RBP6.19□□□□□ -1.42
VCAN-202ENST00000342785 TMEM56Q96MV1 263 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 LYRM2Q9NU23 88 aaPredicted RBP6.19□□□□□ -1.42
VCAN-202ENST00000342785 CLN8Q9UBY8 286 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 ZNF835Q9Y2P0 537 aa6.19□□□□□ -1.42
VCAN-202ENST00000342785 PCNX1Q96RV3 2341 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 XKRY2A2RUG3 117 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 H0YL77 283 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 K7EQM0 130 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 SPINK4O60575 86 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 DANCRP0C864 163 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 COX5BP10606 129 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 MMP9P14780 707 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 UCP2P55851 309 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 TMEM108Q6UXF1 575 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 SIGLECL1Q8N7X8 197 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 OR10A7Q8NGE5 316 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 ABHD14BQ96IU4 210 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 ADTRPQ96IZ2 230 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 FAM166AQ6J272 317 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 GFRALQ6UXV0 394 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 TP53RKQ96S44 253 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 PRDM6Q9NQX0 595 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 COL6A6A6NMZ7 2263 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 LRRC10Q5BKY1 277 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 SLC23A3Q6PIS1 610 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 FGFRL1Q8N441 504 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 OR4C12Q96R67 309 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 FAM103A1Q9BTL3 118 aaKnown RBP6.18□□□□□ -1.42
VCAN-202ENST00000342785 PKIBQ9C010 78 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 PRO1933Q9H354 126 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 HSBP1O75506 76 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 CT45A10P0DMU9 189 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 CTRB1P17538 263 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 RND3P61587 244 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 CTRB2Q6GPI1 263 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 ACSM6Q6P461 480 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 ZNF818PQ6ZRF7 136 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 SELENOHQ8IZQ5 122 aaKnown RBP6.18□□□□□ -1.42
VCAN-202ENST00000342785 EIF4E3Q8N5X7 224 aaKnown RBP6.18□□□□□ -1.42
VCAN-202ENST00000342785 OR52L2PQ8NGH6 319 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 RNF126Q9BV68 326 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 AURKAIP1Q9NWT8 199 aaPredicted RBP6.18□□□□□ -1.42
VCAN-202ENST00000342785 CLDN16Q9Y5I7 305 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 TMEM210A6NLX4 147 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 C9orf152Q5JTZ5 239 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 FADS6Q8N9I5 356 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 POM121Q96HA1 1249 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 SH3BGRL3Q9H299 93 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 OR1A1Q9P1Q5 309 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 NAT8BQ9UHF3 227 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 WDR81Q562E7 1941 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 SYNGR3O43761 229 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 HBZP02008 142 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 MDKP21741 143 aaPredicted RBP6.18□□□□□ -1.42
VCAN-202ENST00000342785 SUCLG1P53597 346 aaKnown RBP6.18□□□□□ -1.42
VCAN-202ENST00000342785 FAM89BQ8N5H3 189 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 OR1L1Q8NH94 360 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 TMEM230Q96A57 120 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 RHOVQ96L33 236 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 SH2D2AQ9NP31 389 aa6.18□□□□□ -1.42
VCAN-202ENST00000342785 NOTCH3Q9UM47 2321 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 NKX2-8O15522 239 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 EIF3GO75821 320 aaKnown RBP eCLIP6.17□□□□□ -1.42
VCAN-202ENST00000342785 CELA3AP09093 270 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 GABRA6Q16445 453 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 NAT1P18440 290 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 PRDX2P32119 198 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 B2MP61769 119 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 HIST1H3AP68431 136 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 BHLHA15Q7RTS1 189 aaPredicted RBP6.17□□□□□ -1.42
VCAN-202ENST00000342785 SAXO1Q8IYX7 474 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 DDA1Q9BW61 102 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 ZNF552Q9H707 407 aaPredicted RBP6.17□□□□□ -1.42
VCAN-202ENST00000342785 DOCK7Q96N67 2140 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 SHANK1Q9Y566 2161 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 IGLV3-32A0A0A0MS00 114 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 MARS2Q96GW9 593 aaKnown RBP6.17□□□□□ -1.42
VCAN-202ENST00000342785 MS4A10Q96PG2 267 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 MANBALQ9NQG1 85 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 RNF7Q9UBF6 113 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 CADP27708 2225 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 A0A1W2PPE3 182 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 FCN1O00602 326 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 MGST3O14880 152 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 HSPB1P04792 205 aaKnown RBP6.17□□□□□ -1.42
VCAN-202ENST00000342785 UMODP07911 640 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 KRTDAPP60985 99 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 NSUN5P2Q63ZY6 315 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 GAL3ST2Q9H3Q3 398 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 TSC2P49815 1807 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 RALGAPA1Q6GYQ0 2036 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 LOC102723996A0A087X1L8 192 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 CTSSP25774 331 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms