RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 C17orf98A8MV24 154 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 RNASEK-C17orf49H0YIS7 233 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 CLDN34H7C241 214 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 MGST3O14880 152 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 CALCBP10092 127 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 SPP1P10451 314 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 PAX5Q02548 391 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 MEF2CQ06413 473 aaPredicted RBP8.36□□□□□ -1.07
TPM3-207ENST00000341372 ACSM3Q53FZ2 586 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 RUSC1-AS1Q66K80 236 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 HCP5Q6MZN7 132 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 PQLC2Q6ZP29 291 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 Q6ZWC4 215 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 GDPD3Q7L5L3 318 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 SNX29P2Q8IUI4 249 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 PHYHIPQ92561 330 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 KIRREL1Q96J84 757 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 HARBI1Q96MB7 349 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 NKX3-1Q99801 234 aaPredicted RBP8.36□□□□□ -1.07
TPM3-207ENST00000341372 MIXL1Q9H2W2 232 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 SIRT7Q9NRC8 400 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 SOX21Q9Y651 276 aaPredicted RBP8.36□□□□□ -1.07
TPM3-207ENST00000341372 A0A0G2JK05 382 aa8.35□□□□□ -1.07
TPM3-207ENST00000341372 A0A1W2PPK0 400 aa8.35□□□□□ -1.07
TPM3-207ENST00000341372 ZNF780AO75290 641 aaPredicted RBP8.35□□□□□ -1.07
TPM3-207ENST00000341372 UCHL1P09936 223 aa8.35□□□□□ -1.07
TPM3-207ENST00000341372 CD37P11049 281 aa8.35□□□□□ -1.07
TPM3-207ENST00000341372 PRRX1P54821 245 aa8.35□□□□□ -1.07
TPM3-207ENST00000341372 P2RX3P56373 397 aa8.35□□□□□ -1.07
TPM3-207ENST00000341372 RSU1Q15404 277 aa8.35□□□□□ -1.07
TPM3-207ENST00000341372 TRAM1Q15629 374 aa8.35□□□□□ -1.07
TPM3-207ENST00000341372 GRK1Q15835 563 aa8.35□□□□□ -1.07
TPM3-207ENST00000341372 CCDC190Q86UF4 302 aa8.35□□□□□ -1.07
TPM3-207ENST00000341372 OR4M1Q8NGD0 313 aa8.35□□□□□ -1.07
TPM3-207ENST00000341372 SDHCQ99643 169 aaPredicted RBP8.35□□□□□ -1.07
TPM3-207ENST00000341372 UQCC2Q9BRT2 126 aa8.35□□□□□ -1.07
TPM3-207ENST00000341372 CHST6Q9GZX3 395 aa8.35□□□□□ -1.07
TPM3-207ENST00000341372 METTL9Q9H1A3 318 aa8.35□□□□□ -1.07
TPM3-207ENST00000341372 LINC00312Q9Y6C7 94 aa8.35□□□□□ -1.07
TPM3-207ENST00000341372 DNAJC9-AS1A6NH13 148 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 SIRPB1O00241 398 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 CCL3L1P16619 93 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 GABRR1P24046 479 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 ETV6P41212 452 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 RORCP51449 518 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 UBE2E1P51965 193 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 UBA52P62987 128 aaKnown RBP8.34□□□□□ -1.07
TPM3-207ENST00000341372 CFHR3Q02985 330 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 DEFB112Q30KQ8 113 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 LINC00596Q86U02 117 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 LRRTM1Q86UE6 522 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 LDLRAD3Q86YD5 345 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 OR10K1Q8NGX5 313 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 SPATA3Q8NHX4 192 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 BORCS5Q969J3 196 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 C19orf24Q9BVV8 132 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 C6orf62Q9GZU0 229 aaPredicted RBP8.34□□□□□ -1.07
TPM3-207ENST00000341372 MDFIC2A0A1B0GVS7 189 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 A0A1W2PPQ1 181 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 hADV38S2A0JD32 116 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 CXorf65A6NEN9 183 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 MAS1P04201 325 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 ZNF728P0DKX0 622 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 ZNF44P15621 663 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 TNFSF8P32971 234 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 DLX1P56177 255 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 EDDM3BP56851 147 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 RBM11P57052 281 aaKnown RBP8.34□□□□□ -1.07
TPM3-207ENST00000341372 KLRD1Q13241 179 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 RBMS3Q6XE24 437 aaKnown RBP8.34□□□□□ -1.07
TPM3-207ENST00000341372 CEACAM19Q7Z692 300 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 OR4D6Q8NGJ1 314 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 MRPS24Q96EL2 167 aaKnown RBP8.34□□□□□ -1.07
TPM3-207ENST00000341372 COQ2Q96H96 371 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 PPA2Q9H2U2 334 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 VCX2Q9H322 139 aa8.34□□□□□ -1.07
TPM3-207ENST00000341372 ANK2Q01484 3957 aa8.33□□□□□ -1.08
TPM3-207ENST00000341372 TRAV24A0A0B4J272 114 aa8.33□□□□□ -1.08
TPM3-207ENST00000341372 FUOMA2VDF0 154 aa8.33□□□□□ -1.08
TPM3-207ENST00000341372 DEGS1O15121 323 aa8.33□□□□□ -1.08
TPM3-207ENST00000341372 NPFFO15130 113 aa8.33□□□□□ -1.08
TPM3-207ENST00000341372 KCNJ3P48549 501 aa8.33□□□□□ -1.08
TPM3-207ENST00000341372 OR10A3P58181 314 aa8.33□□□□□ -1.08
TPM3-207ENST00000341372 GPR176Q14439 515 aa8.33□□□□□ -1.08
TPM3-207ENST00000341372 EDDM3AQ14507 147 aa8.33□□□□□ -1.08
TPM3-207ENST00000341372 ZNF846Q147U1 533 aa8.33□□□□□ -1.08
TPM3-207ENST00000341372 MPV17LQ2QL34 196 aa8.33□□□□□ -1.08
TPM3-207ENST00000341372 PIGYQ3MUY2 71 aa8.33□□□□□ -1.08
TPM3-207ENST00000341372 HSD17B12Q53GQ0 312 aa8.33□□□□□ -1.08
TPM3-207ENST00000341372 Q6YL49 198 aa8.33□□□□□ -1.08
TPM3-207ENST00000341372 OSR2Q8N2R0 312 aa8.33□□□□□ -1.08
TPM3-207ENST00000341372 JAGN1Q8N5M9 183 aa8.33□□□□□ -1.08
TPM3-207ENST00000341372 TMEM86BQ8N661 226 aa8.33□□□□□ -1.08
TPM3-207ENST00000341372 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.33□□□□□ -1.08
TPM3-207ENST00000341372 SNAPC3Q92966 411 aa8.33□□□□□ -1.08
TPM3-207ENST00000341372 ZNF714Q96N38 554 aa8.33□□□□□ -1.08
TPM3-207ENST00000341372 GFI1Q99684 422 aa8.33□□□□□ -1.08
TPM3-207ENST00000341372 MRPS28Q9Y2Q9 187 aaKnown RBP8.33□□□□□ -1.08
TPM3-207ENST00000341372 KIAA2026Q5HYC2 2103 aa8.33□□□□□ -1.08
TPM3-207ENST00000341372 TRGV11A0A075B6L2 103 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms