RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 OR8G5Q8NG78 346 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 ISOC2Q96AB3 205 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 POM121Q96HA1 1249 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 SLC25A31Q9H0C2 315 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 ARV1Q9H2C2 271 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 TREM2Q9NZC2 230 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 PROCRQ9UNN8 238 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 POLEQ07864 2286 aa8.71□□□□□ -1.01
LIMA1-201ENST00000341247 PKDREJQ9NTG1 2253 aa8.71□□□□□ -1.02
LIMA1-201ENST00000341247 IGHV3OR15-7A0A075B7D8 119 aa8.71□□□□□ -1.02
LIMA1-201ENST00000341247 NUDT19A8MXV4 375 aa8.71□□□□□ -1.02
LIMA1-201ENST00000341247 PRR33A8MZF0 331 aa8.71□□□□□ -1.02
LIMA1-201ENST00000341247 C12orf77C9JDV5 145 aa8.71□□□□□ -1.02
LIMA1-201ENST00000341247 RAMP3O60896 148 aa8.71□□□□□ -1.02
LIMA1-201ENST00000341247 PAX9P55771 341 aa8.71□□□□□ -1.02
LIMA1-201ENST00000341247 TCF15Q12870 199 aa8.71□□□□□ -1.02
LIMA1-201ENST00000341247 ZNF266Q14584 549 aa8.71□□□□□ -1.02
LIMA1-201ENST00000341247 SRSF7Q16629 238 aaKnown RBP eCLIP8.71□□□□□ -1.02
LIMA1-201ENST00000341247 ZNF880Q6PDB4 577 aa8.71□□□□□ -1.02
LIMA1-201ENST00000341247 THNSL2Q86YJ6 484 aa8.71□□□□□ -1.02
LIMA1-201ENST00000341247 C11orf53Q8IXP5 236 aa8.71□□□□□ -1.02
LIMA1-201ENST00000341247 CABLES2Q9BTV7 478 aa8.71□□□□□ -1.02
LIMA1-201ENST00000341247 C11orf1Q9H5F2 150 aa8.71□□□□□ -1.02
LIMA1-201ENST00000341247 KCNIP1Q9NZI2 227 aa8.71□□□□□ -1.02
LIMA1-201ENST00000341247 M0R1B8 84 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 IGKV1-5P01602 117 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 FBP1P09467 338 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 SHEQ5VZ18 495 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 Q8IYB0 196 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 STARD4Q96DR4 205 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 RSG1Q9BU20 258 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 DKK4Q9UBT3 224 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 IGHV1-18A0A0C4DH31 117 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.7□□□□□ -1.02
LIMA1-201ENST00000341247 AQP7O14520 342 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 IGKV3-15P01624 115 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 COL10A1Q03692 680 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 TLE1Q04724 770 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 SPRNQ5BIV9 151 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 SPANXN5Q5MJ07 72 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 ZADH2Q8N4Q0 377 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 ABHD14BQ96IU4 210 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 FAM234AQ9H0X4 552 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 SH3BGRL2Q9UJC5 107 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 PRELID1Q9Y255 219 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 CHD3Q12873 2000 aaKnown RBP8.7□□□□□ -1.02
LIMA1-201ENST00000341247 IGHV2OR16-5A0A0B4J2B6 119 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 PITX3O75364 302 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 RBMXL2O75526 392 aaKnown RBP8.7□□□□□ -1.02
LIMA1-201ENST00000341247 TNFSF13O75888 250 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 G6PCP35575 357 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 ZNF146Q15072 292 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 MSMPQ1L6U9 139 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 ZNF585BQ52M93 769 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 FAM201AQ5SY85 155 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 C10orf91Q5T1B1 145 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 FIP1L1Q6UN15 594 aaKnown RBP8.7□□□□□ -1.02
LIMA1-201ENST00000341247 WDR82Q6UXN9 313 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 ZGRF1Q86YA3 2104 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 SFT2D1Q8WV19 159 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 LRRC29Q8WV35 223 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 RNF115Q9Y4L5 304 aa8.7□□□□□ -1.02
LIMA1-201ENST00000341247 TRBV6-6A0A0A6YYG2 114 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 OR5H1A6NKK0 313 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 HBZP02008 142 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 AKR1D1P51857 326 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 PEA15Q15121 130 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 SEM1Q6ZVN7 128 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 BHLHA15Q7RTS1 189 aaPredicted RBP8.69□□□□□ -1.02
LIMA1-201ENST00000341247 STX12Q86Y82 276 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 GALMQ96C23 342 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 PUS1Q9Y606 427 aaKnown RBP eCLIP8.69□□□□□ -1.02
LIMA1-201ENST00000341247 TMEM30CPA0ZSE6 113 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 HEXAP06865 529 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 MDH2P40926 338 aaKnown RBP8.69□□□□□ -1.02
LIMA1-201ENST00000341247 RPL30P62888 115 aaKnown RBP8.69□□□□□ -1.02
LIMA1-201ENST00000341247 ZNF718Q3SXZ3 478 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 KRBOX4Q5JUW0 171 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 OR8G2PQ6IF36 304 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 FAM122CQ6P4D5 195 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 ZNF295-AS1Q8N0V1 137 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 NINJ1Q92982 152 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 C14orf79Q96F83 325 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 COQ2Q96H96 371 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 CLCC1Q96S66 551 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 PSENENQ9NZ42 101 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 NBASA2RRP1 2371 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 UMAD1C9J7I0 102 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 FAM157AC9JC47 383 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 K7N7A8 449 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 ST8SIA5O15466 376 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 KLK10O43240 276 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 RPL23AP62750 156 aaKnown RBP8.69□□□□□ -1.02
LIMA1-201ENST00000341247 ARL16Q0P5N6 197 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 GUSBP1Q15486 140 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 HFEQ30201 348 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 AWAT1Q58HT5 328 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 AKR1C8PQ5T2L2 129 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 OR13A1Q8NGR1 328 aa8.69□□□□□ -1.02
LIMA1-201ENST00000341247 RXFP4Q8TDU9 374 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms