RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 TMPRSS7Q7RTY8 843 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 NUFIP2Q7Z417 695 aaKnown RBP12.24□□□□□ -0.45
CPSF7-201ENST00000340437 TPRX1Q8N7U7 411 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 GATAD1Q8WUU5 269 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 MAP1LC3B2A6NCE7 125 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 H0Y980 276 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 CDIPTO14735 213 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 CYTIPO60759 359 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 PCSK4Q6UW60 755 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 OR5D13Q8NGL4 314 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 SNIP1Q8TAD8 396 aaKnown RBP12.24□□□□□ -0.45
CPSF7-201ENST00000340437 WFIKKN1Q96NZ8 548 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 MAP1LC3BQ9GZQ8 125 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 SH2D2AQ9NP31 389 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 BOKQ9UMX3 212 aaPredicted RBP12.24□□□□□ -0.45
CPSF7-201ENST00000340437 LOC102723971A0A1B0GUV8 181 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 CLEC18AA5D8T8 446 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 DEFB108AA8MXU0 73 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 PHOX2AO14813 284 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 NXPH2O95156 264 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 BAXQ07812 192 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 FOXO1Q12778 655 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 ABLIM2Q6H8Q1 611 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 CLEC18CQ8NCF0 446 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 RFESDQ8TAC1 157 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 ABHD5Q8WTS1 349 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 RCC1LQ96I51 464 aaKnown RBP12.24□□□□□ -0.45
CPSF7-201ENST00000340437 MEGF10Q96KG7 1140 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 PRDM14Q9GZV8 571 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 FAM234AQ9H0X4 552 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 LAMP3Q9UQV4 416 aa12.24□□□□□ -0.45
CPSF7-201ENST00000340437 ZNF737O75373 536 aa12.23□□□□□ -0.45
CPSF7-201ENST00000340437 BCL2P10415 239 aa12.23□□□□□ -0.45
CPSF7-201ENST00000340437 G6PCP35575 357 aa12.23□□□□□ -0.45
CPSF7-201ENST00000340437 C11orf1Q9H5F2 150 aa12.23□□□□□ -0.45
CPSF7-201ENST00000340437 GFOD1Q9NXC2 390 aa12.23□□□□□ -0.45
CPSF7-201ENST00000340437 CLN8Q9UBY8 286 aa12.23□□□□□ -0.45
CPSF7-201ENST00000340437 RNF115Q9Y4L5 304 aa12.23□□□□□ -0.45
CPSF7-201ENST00000340437 IGHV3-43A0A0B4J1X8 118 aa12.23□□□□□ -0.45
CPSF7-201ENST00000340437 CLDN34H7C241 214 aa12.23□□□□□ -0.45
CPSF7-201ENST00000340437 IGHV3-43DP0DP04 118 aa12.23□□□□□ -0.45
CPSF7-201ENST00000340437 EGR1P18146 543 aa12.23□□□□□ -0.45
CPSF7-201ENST00000340437 RIPPLY2Q5TAB7 128 aa12.23□□□□□ -0.45
CPSF7-201ENST00000340437 PMS2CLQ68D20 193 aa12.23□□□□□ -0.45
CPSF7-201ENST00000340437 SDSLQ96GA7 329 aa12.23□□□□□ -0.45
CPSF7-201ENST00000340437 LOXL2Q9Y4K0 774 aa12.23□□□□□ -0.45
CPSF7-201ENST00000340437 A0A1W2PPQ1 181 aa12.23□□□□□ -0.45
CPSF7-201ENST00000340437 IGKV1-39P01597 117 aa12.23□□□□□ -0.45
CPSF7-201ENST00000340437 IGKV1D-39P04432 117 aa12.23□□□□□ -0.45
CPSF7-201ENST00000340437 CTXN2P0C2S0 81 aa12.23□□□□□ -0.45
CPSF7-201ENST00000340437 IDH3GP51553 393 aaPredicted RBP12.23□□□□□ -0.45
CPSF7-201ENST00000340437 ZNF726P1Q15940 193 aa12.23□□□□□ -0.45
CPSF7-201ENST00000340437 TMEM37Q8WXS4 190 aa12.23□□□□□ -0.45
CPSF7-201ENST00000340437 FZR1Q9UM11 496 aa12.23□□□□□ -0.45
CPSF7-201ENST00000340437 HEATR1Q9H583 2144 aaKnown RBP12.22□□□□□ -0.45
CPSF7-201ENST00000340437 ATP1A1-AS1Q5TC04 95 aa12.22□□□□□ -0.45
CPSF7-201ENST00000340437 GCNT2Q8N0V5 402 aa12.22□□□□□ -0.45
CPSF7-201ENST00000340437 OR4F5Q8NH21 305 aa12.22□□□□□ -0.45
CPSF7-201ENST00000340437 MALSU1Q96EH3 234 aa12.22□□□□□ -0.45
CPSF7-201ENST00000340437 OR4F4Q96R69 305 aa12.22□□□□□ -0.45
CPSF7-201ENST00000340437 A0A0U1RQK1 487 aa12.22□□□□□ -0.45
CPSF7-201ENST00000340437 MDH2P40926 338 aaKnown RBP12.22□□□□□ -0.45
CPSF7-201ENST00000340437 ALKBH6Q3KRA9 238 aa12.22□□□□□ -0.45
CPSF7-201ENST00000340437 ZNF324BQ6AW86 544 aaPredicted RBP12.22□□□□□ -0.45
CPSF7-201ENST00000340437 C6orf15Q6UXA7 325 aaPredicted RBP12.22□□□□□ -0.45
CPSF7-201ENST00000340437 WNK2Q9Y3S1 2297 aa12.22□□□□□ -0.45
CPSF7-201ENST00000340437 MT-CO3P00414 261 aa12.22□□□□□ -0.45
CPSF7-201ENST00000340437 IGKV1-5P01602 117 aa12.22□□□□□ -0.45
CPSF7-201ENST00000340437 HNF1AP20823 631 aa12.22□□□□□ -0.45
CPSF7-201ENST00000340437 PMELP40967 661 aa12.22□□□□□ -0.45
CPSF7-201ENST00000340437 UBE2G2P60604 165 aa12.22□□□□□ -0.45
CPSF7-201ENST00000340437 GNG3P63215 75 aa12.22□□□□□ -0.45
CPSF7-201ENST00000340437 HBG1P69891 147 aa12.22□□□□□ -0.45
CPSF7-201ENST00000340437 HBG2P69892 147 aa12.22□□□□□ -0.45
CPSF7-201ENST00000340437 SLC38A11Q08AI6 406 aa12.22□□□□□ -0.45
CPSF7-201ENST00000340437 TMEM164Q5U3C3 297 aa12.22□□□□□ -0.45
CPSF7-201ENST00000340437 FIP1L1Q6UN15 594 aaKnown RBP12.22□□□□□ -0.45
CPSF7-201ENST00000340437 ZNF573Q86YE8 665 aa12.22□□□□□ -0.45
CPSF7-201ENST00000340437 KDF1Q8NAX2 398 aaPredicted RBP12.22□□□□□ -0.45
CPSF7-201ENST00000340437 RAB40CQ96S21 281 aa12.22□□□□□ -0.45
CPSF7-201ENST00000340437 SMCO3A2RU48 225 aa12.21□□□□□ -0.45
CPSF7-201ENST00000340437 USF2Q15853 346 aaPredicted RBP12.21□□□□□ -0.45
CPSF7-201ENST00000340437 FAM90A2PQ658T7 463 aa12.21□□□□□ -0.45
CPSF7-201ENST00000340437 ZNF826PQ6ZT77 177 aa12.21□□□□□ -0.45
CPSF7-201ENST00000340437 OR5A2Q8NGI9 324 aa12.21□□□□□ -0.45
CPSF7-201ENST00000340437 TECTBQ96PL2 329 aa12.21□□□□□ -0.45
CPSF7-201ENST00000340437 SH3BGRL2Q9UJC5 107 aa12.21□□□□□ -0.45
CPSF7-201ENST00000340437 SEC14L6B5MCN3 397 aa12.21□□□□□ -0.46
CPSF7-201ENST00000340437 DNPH1O43598 174 aa12.21□□□□□ -0.46
CPSF7-201ENST00000340437 CELA3BP08861 270 aa12.21□□□□□ -0.46
CPSF7-201ENST00000340437 ADAMTS20P59510 1910 aa12.21□□□□□ -0.46
CPSF7-201ENST00000340437 SSX9Q7RTT3 188 aa12.21□□□□□ -0.46
CPSF7-201ENST00000340437 CNEP1R1Q8N9A8 125 aa12.21□□□□□ -0.46
CPSF7-201ENST00000340437 OR2M7Q8NG81 312 aa12.21□□□□□ -0.46
CPSF7-201ENST00000340437 PACRGQ96M98 296 aaPredicted RBP12.21□□□□□ -0.46
CPSF7-201ENST00000340437 OR5H1A6NKK0 313 aa12.21□□□□□ -0.46
CPSF7-201ENST00000340437 RAMP3O60896 148 aa12.21□□□□□ -0.46
CPSF7-201ENST00000340437 LMO1P25800 156 aa12.21□□□□□ -0.46
CPSF7-201ENST00000340437 WNT5AP41221 380 aa12.21□□□□□ -0.46
CPSF7-201ENST00000340437 DUSP3P51452 185 aaPredicted RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms