RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 NPAS1Q99742 590 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 ELOVL1Q9BW60 279 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 CST7O76096 145 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 HTN1P15515 57 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 LINC00303Q3SY05 128 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 RAB40CQ96S21 281 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 PRSS22Q9GZN4 317 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 JPT1Q9UK76 154 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 ADAM11O75078 769 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 CRYBA2P53672 197 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 TPPP2P59282 170 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 ZNF529Q6P280 563 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 SLC25A17O43808 307 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 FSTP19883 344 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 HTR2BP41595 481 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 RPEL1Q2QD12 228 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 COLCA1Q6ZS62 124 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 LINC01356Q8N9X3 169 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 OR1L4Q8NGR5 311 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 TMEM165Q9HC07 324 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 Q9N2K0 584 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 DIDO1Q9BTC0 2240 aaKnown RBP10.9□□□□□ -0.66
LIN54-201ENST00000340417 HPRT1P00492 218 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 IGHV1-46P01743 117 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 TRAPPC2P0DI81 140 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 TRAPPC2BP0DI82 140 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 SMIM17P0DL12 118 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 PAX6P26367 422 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 NPBWR2P48146 333 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 ZNF273Q14593 569 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 C12orf54Q6X4T0 127 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 RPRMLQ8N4K4 120 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 ZIC4Q8N9L1 334 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 G6PC2Q9NQR9 355 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 MLXQ9UH92 298 aa10.9□□□□□ -0.66
LIN54-201ENST00000340417 RTTNQ86VV8 2226 aa10.9□□□□□ -0.67
LIN54-201ENST00000340417 A0A087WV48 116 aa10.9□□□□□ -0.67
LIN54-201ENST00000340417 F8W036 122 aa10.9□□□□□ -0.67
LIN54-201ENST00000340417 AKR1D1P51857 326 aa10.9□□□□□ -0.67
LIN54-201ENST00000340417 ZFAND2BQ8WV99 257 aa10.9□□□□□ -0.67
LIN54-201ENST00000340417 KCNAB3O43448 404 aa10.89□□□□□ -0.67
LIN54-201ENST00000340417 GSTZ1O43708 216 aaPredicted RBP10.89□□□□□ -0.67
LIN54-201ENST00000340417 FCGR3AP08637 254 aa10.89□□□□□ -0.67
LIN54-201ENST00000340417 NKX2-5P52952 324 aaPredicted RBP10.89□□□□□ -0.67
LIN54-201ENST00000340417 UBE2V2Q15819 145 aa10.89□□□□□ -0.67
LIN54-201ENST00000340417 OR8I2Q8N0Y5 310 aa10.89□□□□□ -0.67
LIN54-201ENST00000340417 POC1AQ8NBT0 407 aa10.89□□□□□ -0.67
LIN54-201ENST00000340417 DUS4LO95620 317 aaKnown RBP10.89□□□□□ -0.67
LIN54-201ENST00000340417 CTSDP07339 412 aaPredicted RBP10.89□□□□□ -0.67
LIN54-201ENST00000340417 FOXG1P55316 489 aaPredicted RBP10.89□□□□□ -0.67
LIN54-201ENST00000340417 SLC38A11Q08AI6 406 aa10.89□□□□□ -0.67
LIN54-201ENST00000340417 CALHM1Q8IU99 346 aa10.89□□□□□ -0.67
LIN54-201ENST00000340417 WBP1Q96G27 269 aa10.89□□□□□ -0.67
LIN54-201ENST00000340417 MRPS18AQ9NVS2 196 aaKnown RBP10.89□□□□□ -0.67
LIN54-201ENST00000340417 XKRY2A2RUG3 117 aa10.89□□□□□ -0.67
LIN54-201ENST00000340417 SLC35E3Q7Z769 313 aa10.89□□□□□ -0.67
LIN54-201ENST00000340417 COL4A4P53420 1690 aaPredicted RBP10.89□□□□□ -0.67
LIN54-201ENST00000340417 TM4SF5O14894 197 aa10.89□□□□□ -0.67
LIN54-201ENST00000340417 EFNA2O43921 213 aa10.89□□□□□ -0.67
LIN54-201ENST00000340417 SFT2D2O95562 160 aa10.89□□□□□ -0.67
LIN54-201ENST00000340417 LCN15Q6UWW0 184 aa10.89□□□□□ -0.67
LIN54-201ENST00000340417 LINC00114Q6XXX2 140 aa10.89□□□□□ -0.67
LIN54-201ENST00000340417 CCDC190Q86UF4 302 aa10.89□□□□□ -0.67
LIN54-201ENST00000340417 NAGKQ9UJ70 344 aa10.89□□□□□ -0.67
LIN54-201ENST00000340417 DNM1P46Q6ZS02 220 aa10.88□□□□□ -0.67
LIN54-201ENST00000340417 ZNF486Q96H40 463 aaPredicted RBP10.88□□□□□ -0.67
LIN54-201ENST00000340417 PTPRDP23468 1912 aa10.88□□□□□ -0.67
LIN54-201ENST00000340417 RHBDL1O75783 438 aa10.88□□□□□ -0.67
LIN54-201ENST00000340417 LINC01590Q5TEZ4 76 aa10.88□□□□□ -0.67
LIN54-201ENST00000340417 BLNKQ8WV28 456 aa10.88□□□□□ -0.67
LIN54-201ENST00000340417 REPIN1Q9BWE0 567 aaKnown RBP10.88□□□□□ -0.67
LIN54-201ENST00000340417 PCNX2A6NKB5 2137 aa10.88□□□□□ -0.67
LIN54-201ENST00000340417 K7EM74 188 aa10.88□□□□□ -0.67
LIN54-201ENST00000340417 LRP11Q86VZ4 500 aa10.88□□□□□ -0.67
LIN54-201ENST00000340417 ZNF525Q8N782 197 aa10.88□□□□□ -0.67
LIN54-201ENST00000340417 MEF2CQ06413 473 aaPredicted RBP10.88□□□□□ -0.67
LIN54-201ENST00000340417 MRGPRFQ96AM1 343 aa10.88□□□□□ -0.67
LIN54-201ENST00000340417 A0A1W2PP11 408 aa10.88□□□□□ -0.67
LIN54-201ENST00000340417 A0A1W2PS18 150 aa10.88□□□□□ -0.67
LIN54-201ENST00000340417 TAAR5O14804 337 aa10.88□□□□□ -0.67
LIN54-201ENST00000340417 COL8A1P27658 744 aa10.88□□□□□ -0.67
LIN54-201ENST00000340417 NSUN5P1Q3KNT7 163 aa10.88□□□□□ -0.67
LIN54-201ENST00000340417 ZNF66Q6ZN08 573 aa10.88□□□□□ -0.67
LIN54-201ENST00000340417 SSX7Q7RTT5 188 aa10.88□□□□□ -0.67
LIN54-201ENST00000340417 LYSMD2Q8IV50 215 aa10.88□□□□□ -0.67
LIN54-201ENST00000340417 ZNF645Q8N7E2 425 aa10.88□□□□□ -0.67
LIN54-201ENST00000340417 OR52B4Q8NGK2 314 aa10.88□□□□□ -0.67
LIN54-201ENST00000340417 MED9Q9NWA0 146 aa10.88□□□□□ -0.67
LIN54-201ENST00000340417 H2AFB1P0C5Y9 115 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 ASAH1Q13510 395 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 FAM90A1Q86YD7 464 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 PRELID1Q9Y255 219 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 TRAV20A0A0B4J274 112 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 IGKV1D-33P01593 117 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 IGKV1-33P01594 117 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 SCTP09683 121 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 AKR1C3P42330 323 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 GAS1P54826 345 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 B3GALT5-AS1P59052 145 aa10.87□□□□□ -0.67
LIN54-201ENST00000340417 RANGRFQ9HD47 186 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms