RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 SOSTQ9BQB4 213 aa12.59□□□□□ -0.39
RET-201ENST00000340058 HES4Q9HCC6 221 aa12.59□□□□□ -0.39
RET-201ENST00000340058 FHL1Q13642 323 aa12.59□□□□□ -0.39
RET-201ENST00000340058 KHDC1LQ5JSQ8 128 aa12.59□□□□□ -0.39
RET-201ENST00000340058 VKORC1L1Q8N0U8 176 aa12.59□□□□□ -0.39
RET-201ENST00000340058 CLRN3Q8NCR9 226 aa12.59□□□□□ -0.39
RET-201ENST00000340058 TMEM37Q8WXS4 190 aa12.59□□□□□ -0.39
RET-201ENST00000340058 POMT1Q9Y6A1 747 aa12.59□□□□□ -0.39
RET-201ENST00000340058 ZNF90Q03938 601 aa12.59□□□□□ -0.39
RET-201ENST00000340058 GUCA2BQ16661 112 aa12.59□□□□□ -0.39
RET-201ENST00000340058 PHYHIPLQ96FC7 376 aa12.59□□□□□ -0.39
RET-201ENST00000340058 RSRP1Q9BUV0 290 aa12.59□□□□□ -0.39
RET-201ENST00000340058 KCNIP2Q9NS61 270 aa12.59□□□□□ -0.39
RET-201ENST00000340058 IGKV1D-8A0A087WSZ0 117 aa12.58□□□□□ -0.4
RET-201ENST00000340058 C15orf54Q8N8G6 183 aa12.58□□□□□ -0.4
RET-201ENST00000340058 SLC35B3Q9H1N7 401 aa12.58□□□□□ -0.4
RET-201ENST00000340058 CDS2O95674 445 aa12.58□□□□□ -0.4
RET-201ENST00000340058 RBP4P02753 201 aa12.58□□□□□ -0.4
RET-201ENST00000340058 PRB3Q04118 309 aaPredicted RBP12.58□□□□□ -0.4
RET-201ENST00000340058 CSRP2Q16527 193 aa12.58□□□□□ -0.4
RET-201ENST00000340058 C1orf185Q5T7R7 199 aa12.58□□□□□ -0.4
RET-201ENST00000340058 BTNL8Q6UX41 500 aa12.58□□□□□ -0.4
RET-201ENST00000340058 ZNF818PQ6ZRF7 136 aa12.58□□□□□ -0.4
RET-201ENST00000340058 TP53RKQ96S44 253 aa12.58□□□□□ -0.4
RET-201ENST00000340058 PRDM14Q9GZV8 571 aa12.58□□□□□ -0.4
RET-201ENST00000340058 MKI67P46013 3256 aaKnown RBP12.58□□□□□ -0.4
RET-201ENST00000340058 BRCA2P51587 3418 aa12.58□□□□□ -0.4
RET-201ENST00000340058 TRAV38-1A0A0B4J264 116 aa12.58□□□□□ -0.4
RET-201ENST00000340058 AHRRA9YTQ3 701 aa12.58□□□□□ -0.4
RET-201ENST00000340058 H0YL77 283 aa12.58□□□□□ -0.4
RET-201ENST00000340058 IGHV3-48P01763 117 aa12.58□□□□□ -0.4
RET-201ENST00000340058 PTGDSP41222 190 aa12.58□□□□□ -0.4
RET-201ENST00000340058 LHX2P50458 406 aa12.58□□□□□ -0.4
RET-201ENST00000340058 RTP5Q14D33 572 aa12.58□□□□□ -0.4
RET-201ENST00000340058 P2RY6Q15077 328 aa12.58□□□□□ -0.4
RET-201ENST00000340058 TIGITQ495A1 244 aa12.58□□□□□ -0.4
RET-201ENST00000340058 OR51I2Q9H344 312 aa12.58□□□□□ -0.4
RET-201ENST00000340058 Q9N2K0 584 aa12.58□□□□□ -0.4
RET-201ENST00000340058 LINC00862A6NCI5 91 aa12.57□□□□□ -0.4
RET-201ENST00000340058 ZNF716A6NP11 495 aa12.57□□□□□ -0.4
RET-201ENST00000340058 COX7A2P2O60397 106 aa12.57□□□□□ -0.4
RET-201ENST00000340058 CECR9P0C854 216 aa12.57□□□□□ -0.4
RET-201ENST00000340058 ZNF708P17019 499 aa12.57□□□□□ -0.4
RET-201ENST00000340058 IGFBP3P17936 291 aaPredicted RBP12.57□□□□□ -0.4
RET-201ENST00000340058 ORM2P19652 201 aa12.57□□□□□ -0.4
RET-201ENST00000340058 UBE2G1P62253 170 aa12.57□□□□□ -0.4
RET-201ENST00000340058 HABP2Q14520 560 aaPredicted RBP12.57□□□□□ -0.4
RET-201ENST00000340058 HSD17B13Q7Z5P4 300 aaPredicted RBP12.57□□□□□ -0.4
RET-201ENST00000340058 HSD17B10Q99714 261 aaKnown RBP12.57□□□□□ -0.4
RET-201ENST00000340058 PIPOXQ9P0Z9 390 aa12.57□□□□□ -0.4
RET-201ENST00000340058 PLXNA4Q9HCM2 1894 aa12.57□□□□□ -0.4
RET-201ENST00000340058 FREM1Q5H8C1 2179 aa12.57□□□□□ -0.4
RET-201ENST00000340058 MED13Q9UHV7 2174 aa12.57□□□□□ -0.4
RET-201ENST00000340058 BTBD17A6NE02 478 aa12.57□□□□□ -0.4
RET-201ENST00000340058 F6UZH7 168 aa12.57□□□□□ -0.4
RET-201ENST00000340058 CD74P04233 296 aa12.57□□□□□ -0.4
RET-201ENST00000340058 MDKP21741 143 aaPredicted RBP12.57□□□□□ -0.4
RET-201ENST00000340058 P2RY1P47900 373 aa12.57□□□□□ -0.4
RET-201ENST00000340058 CLDN18P56856 261 aa12.57□□□□□ -0.4
RET-201ENST00000340058 AWAT1Q58HT5 328 aa12.57□□□□□ -0.4
RET-201ENST00000340058 OR5D13Q8NGL4 314 aa12.57□□□□□ -0.4
RET-201ENST00000340058 DENND4CQ5VZ89 1909 aa12.57□□□□□ -0.4
RET-201ENST00000340058 ZNF320A2RRD8 509 aa12.57□□□□□ -0.4
RET-201ENST00000340058 C9orf106Q8NAJ2 232 aa12.57□□□□□ -0.4
RET-201ENST00000340058 TMEM230Q96A57 120 aa12.57□□□□□ -0.4
RET-201ENST00000340058 BORCS7Q96B45 105 aa12.57□□□□□ -0.4
RET-201ENST00000340058 CCDC168Q8NDH2 2452 aa12.56□□□□□ -0.4
RET-201ENST00000340058 NUDT19A8MXV4 375 aa12.56□□□□□ -0.4
RET-201ENST00000340058 ZNF737O75373 536 aa12.56□□□□□ -0.4
RET-201ENST00000340058 PGLYRP1O75594 196 aaPredicted RBP12.56□□□□□ -0.4
RET-201ENST00000340058 MPV17P39210 176 aa12.56□□□□□ -0.4
RET-201ENST00000340058 IL24Q13007 206 aa12.56□□□□□ -0.4
RET-201ENST00000340058 PSG7Q13046 419 aa12.56□□□□□ -0.4
RET-201ENST00000340058 OR8G5Q8NG78 346 aa12.56□□□□□ -0.4
RET-201ENST00000340058 BLNKQ8WV28 456 aa12.56□□□□□ -0.4
RET-201ENST00000340058 ZNF581Q9P0T4 197 aa12.56□□□□□ -0.4
RET-201ENST00000340058 TICRRQ7Z2Z1 1910 aa12.56□□□□□ -0.4
RET-201ENST00000340058 RBFOX3A6NFN3 312 aa12.56□□□□□ -0.4
RET-201ENST00000340058 ZNF883P0CG24 379 aa12.56□□□□□ -0.4
RET-201ENST00000340058 GAMTQ14353 236 aa12.56□□□□□ -0.4
RET-201ENST00000340058 TNXAQ16473 311 aa12.56□□□□□ -0.4
RET-201ENST00000340058 SLC25A53Q5H9E4 307 aa12.56□□□□□ -0.4
RET-201ENST00000340058 OR4S2Q8NH73 311 aa12.56□□□□□ -0.4
RET-201ENST00000340058 MOB3AQ96BX8 217 aa12.56□□□□□ -0.4
RET-201ENST00000340058 ABHD17AQ96GS6 310 aa12.56□□□□□ -0.4
RET-201ENST00000340058 RHOVQ96L33 236 aa12.56□□□□□ -0.4
RET-201ENST00000340058 TMEM222Q9H0R3 208 aa12.56□□□□□ -0.4
RET-201ENST00000340058 SH3BGRL3Q9H299 93 aa12.56□□□□□ -0.4
RET-201ENST00000340058 TNFRSF19Q9NS68 423 aa12.56□□□□□ -0.4
RET-201ENST00000340058 MUC1P15941 1255 aaPredicted RBP12.56□□□□□ -0.4
RET-201ENST00000340058 NTF3P20783 257 aa12.56□□□□□ -0.4
RET-201ENST00000340058 VMA21Q3ZAQ7 101 aa12.56□□□□□ -0.4
RET-201ENST00000340058 HARBI1Q96MB7 349 aa12.56□□□□□ -0.4
RET-201ENST00000340058 ANKHD1Q8IWZ3 2542 aaKnown RBP12.56□□□□□ -0.4
RET-201ENST00000340058 DOCK11Q5JSL3 2073 aa12.56□□□□□ -0.4
RET-201ENST00000340058 OR2A4O95047 310 aa12.56□□□□□ -0.4
RET-201ENST00000340058 SNRPEP62304 92 aaKnown RBP12.56□□□□□ -0.4
RET-201ENST00000340058 GPR146Q96CH1 333 aa12.56□□□□□ -0.4
RET-201ENST00000340058 OR2A7Q96R45 310 aa12.56□□□□□ -0.4
RET-201ENST00000340058 FAM117AQ9C073 453 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms