RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 DFFBO76075 338 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 IGKV1-39P01597 117 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 IGKV1D-39P04432 117 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 GRPP07492 148 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 KIR2DS4P43632 304 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 FGF12P61328 243 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 KIR2DS1Q14954 304 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 SLC35E3Q7Z769 313 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 HAPLN4Q86UW8 402 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 CLEC18CQ8NCF0 446 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 GPR87Q9BY21 358 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 ATP23Q9Y6H3 246 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 IGKV1D-33P01593 117 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 IGKV1-33P01594 117 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 G6PCP35575 357 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 B3GALT5-AS1P59052 145 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 BAXQ07812 192 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 OR8B8Q15620 311 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 FOXL2NBQ6ZUU3 175 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 MCEMP1Q8IX19 187 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 FAM185AQ8N0U4 392 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 MISP3Q96FF7 219 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 OR2W1Q9Y3N9 320 aa13.72□□□□□ -0.21
SCARB1-202ENST00000339570 DEFB108AA8MXU0 73 aa13.71□□□□□ -0.21
SCARB1-202ENST00000339570 TGFBR3Q03167 851 aa13.71□□□□□ -0.21
SCARB1-202ENST00000339570 MRPL30Q8TCC3 161 aaKnown RBP13.71□□□□□ -0.21
SCARB1-202ENST00000339570 OPA3Q9H6K4 179 aa13.71□□□□□ -0.21
SCARB1-202ENST00000339570 IGHV3-43A0A0B4J1X8 118 aa13.71□□□□□ -0.21
SCARB1-202ENST00000339570 A0A1B0GU03 582 aa13.71□□□□□ -0.21
SCARB1-202ENST00000339570 IGHV3-43DP0DP04 118 aa13.71□□□□□ -0.21
SCARB1-202ENST00000339570 FKBP2P26885 142 aaKnown RBP13.71□□□□□ -0.21
SCARB1-202ENST00000339570 CEACAM6P40199 344 aa13.71□□□□□ -0.21
SCARB1-202ENST00000339570 Q0VFX4 171 aa13.71□□□□□ -0.21
SCARB1-202ENST00000339570 PCSK4Q6UW60 755 aa13.71□□□□□ -0.21
SCARB1-202ENST00000339570 MRPL41Q8IXM3 137 aaKnown RBP13.71□□□□□ -0.21
SCARB1-202ENST00000339570 KDF1Q8NAX2 398 aaPredicted RBP13.71□□□□□ -0.21
SCARB1-202ENST00000339570 RFESDQ8TAC1 157 aa13.71□□□□□ -0.21
SCARB1-202ENST00000339570 TRAV24A0A0B4J272 114 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 H7BYZ3 331 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 RAMP3O60896 148 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 NAPSAO96009 420 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 CYB5R3P00387 301 aaPredicted RBP13.7□□□□□ -0.22
SCARB1-202ENST00000339570 IGKV1-5P01602 117 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 GZMHP20718 246 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 SLC38A11Q08AI6 406 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 PMS2P11Q13670 270 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 ASCL4Q6XD76 172 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 DNASE2BQ8WZ79 361 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 ZDHHC16Q969W1 377 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 SDF2L1Q9HCN8 221 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 CST9LP1Q5W188 147 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 ZNF525Q8N782 197 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 OR10A7Q8NGE5 316 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 OR51G1Q8NGK1 321 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 TPRP12270 2363 aaKnown RBP13.7□□□□□ -0.22
SCARB1-202ENST00000339570 H0Y980 276 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 GALR1P47211 349 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 FAM58AQ8N1B3 248 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 OR5D13Q8NGL4 314 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 OR5B12Q96R08 314 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 PRSS50Q9UI38 385 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 LAMA5O15230 3695 aa13.7□□□□□ -0.22
SCARB1-202ENST00000339570 C1QTNF9BB2RNN3 333 aa13.69□□□□□ -0.22
SCARB1-202ENST00000339570 SRD5A2P31213 254 aa13.69□□□□□ -0.22
SCARB1-202ENST00000339570 RPP25LQ8N5L8 163 aaKnown RBP13.69□□□□□ -0.22
SCARB1-202ENST00000339570 MAFAQ8NHW3 353 aaPredicted RBP13.69□□□□□ -0.22
SCARB1-202ENST00000339570 SAP25Q8TEE9 199 aa13.69□□□□□ -0.22
SCARB1-202ENST00000339570 SIRT7Q9NRC8 400 aa13.69□□□□□ -0.22
SCARB1-202ENST00000339570 DLL3Q9NYJ7 618 aa13.69□□□□□ -0.22
SCARB1-202ENST00000339570 A0A087WWC5 75 aa13.69□□□□□ -0.22
SCARB1-202ENST00000339570 PPP5D1E7EU14 171 aa13.69□□□□□ -0.22
SCARB1-202ENST00000339570 PAGE4O60829 102 aa13.69□□□□□ -0.22
SCARB1-202ENST00000339570 ZFP36L1Q07352 338 aaKnown RBP13.69□□□□□ -0.22
SCARB1-202ENST00000339570 GCSAMLQ5JQS6 135 aa13.69□□□□□ -0.22
SCARB1-202ENST00000339570 H1FOOQ8IZA3 346 aaPredicted RBP13.69□□□□□ -0.22
SCARB1-202ENST00000339570 OR13D1Q8NGV5 346 aa13.69□□□□□ -0.22
SCARB1-202ENST00000339570 DUSP23Q9BVJ7 150 aa13.69□□□□□ -0.22
SCARB1-202ENST00000339570 ANKRD30BLA7E2S9 258 aa13.69□□□□□ -0.22
SCARB1-202ENST00000339570 IFNA10P01566 189 aa13.69□□□□□ -0.22
SCARB1-202ENST00000339570 TFF3Q07654 80 aa13.69□□□□□ -0.22
SCARB1-202ENST00000339570 BSXQ3C1V8 233 aa13.69□□□□□ -0.22
SCARB1-202ENST00000339570 OR2Y1Q8NGV0 311 aa13.69□□□□□ -0.22
SCARB1-202ENST00000339570 CDIPTO14735 213 aa13.68□□□□□ -0.22
SCARB1-202ENST00000339570 AMBPP02760 352 aa13.68□□□□□ -0.22
SCARB1-202ENST00000339570 CEACAM21Q3KPI0 293 aa13.68□□□□□ -0.22
SCARB1-202ENST00000339570 SF3B5Q9BWJ5 86 aaKnown RBP13.68□□□□□ -0.22
SCARB1-202ENST00000339570 A0A1B0GW64 132 aa13.68□□□□□ -0.22
SCARB1-202ENST00000339570 MAGEA5P43359 124 aa13.68□□□□□ -0.22
SCARB1-202ENST00000339570 CYB561P49447 251 aa13.68□□□□□ -0.22
SCARB1-202ENST00000339570 TMEM241Q24JQ0 296 aa13.68□□□□□ -0.22
SCARB1-202ENST00000339570 OR5P3Q8WZ94 311 aa13.68□□□□□ -0.22
SCARB1-202ENST00000339570 PLSCR2Q9NRY7 297 aa13.68□□□□□ -0.22
SCARB1-202ENST00000339570 VAX2Q9UIW0 290 aa13.68□□□□□ -0.22
SCARB1-202ENST00000339570 FZR1Q9UM11 496 aa13.68□□□□□ -0.22
SCARB1-202ENST00000339570 TOX3O15405 576 aaPredicted RBP13.67□□□□□ -0.22
SCARB1-202ENST00000339570 SCGB1D1O95968 90 aa13.67□□□□□ -0.22
SCARB1-202ENST00000339570 HBG1P69891 147 aa13.67□□□□□ -0.22
SCARB1-202ENST00000339570 HBG2P69892 147 aa13.67□□□□□ -0.22
SCARB1-202ENST00000339570 SSX2Q16385 188 aa13.67□□□□□ -0.22
SCARB1-202ENST00000339570 ZNF324BQ6AW86 544 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms