RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 IGHV3-7P01780 117 aa18.66■□□□□ 0.58
PDLIM2-203ENST00000339162 PAX5Q02548 391 aa18.66■□□□□ 0.58
PDLIM2-203ENST00000339162 MST1LQ2TV78 715 aa18.66■□□□□ 0.58
PDLIM2-203ENST00000339162 ST8SIA2Q92186 375 aa18.66■□□□□ 0.58
PDLIM2-203ENST00000339162 RBPMSQ93062 196 aaKnown RBP18.66■□□□□ 0.58
PDLIM2-203ENST00000339162 GAFA1Q96PS6 74 aa18.66■□□□□ 0.58
PDLIM2-203ENST00000339162 ACACBO00763 2458 aa18.66■□□□□ 0.58
PDLIM2-203ENST00000339162 ABCA4P78363 2273 aa18.65■□□□□ 0.58
PDLIM2-203ENST00000339162 SPINT2O43291 252 aa18.65■□□□□ 0.58
PDLIM2-203ENST00000339162 ADAM20O43506 726 aa18.65■□□□□ 0.58
PDLIM2-203ENST00000339162 DEDDO75618 318 aa18.65■□□□□ 0.58
PDLIM2-203ENST00000339162 APOBEC3AP31941 199 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-203ENST00000339162 ESCO2Q56NI9 601 aa18.65■□□□□ 0.58
PDLIM2-203ENST00000339162 ZNF561Q8N587 486 aa18.65■□□□□ 0.58
PDLIM2-203ENST00000339162 C5orf30Q96GV9 206 aa18.65■□□□□ 0.58
PDLIM2-203ENST00000339162 SEBOXQ9HB31 216 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-203ENST00000339162 RNF115Q9Y4L5 304 aa18.65■□□□□ 0.58
PDLIM2-203ENST00000339162 HIVEP3Q5T1R4 2406 aa18.65■□□□□ 0.58
PDLIM2-203ENST00000339162 K7EPK0 472 aa18.65■□□□□ 0.58
PDLIM2-203ENST00000339162 FAM71E2Q8N5Q1 922 aa18.65■□□□□ 0.58
PDLIM2-203ENST00000339162 OR5D13Q8NGL4 314 aa18.65■□□□□ 0.58
PDLIM2-203ENST00000339162 SDSLQ96GA7 329 aa18.65■□□□□ 0.58
PDLIM2-203ENST00000339162 AKR1E2Q96JD6 320 aa18.65■□□□□ 0.58
PDLIM2-203ENST00000339162 ARPC5LQ9BPX5 153 aa18.65■□□□□ 0.58
PDLIM2-203ENST00000339162 GSX2Q9BZM3 304 aa18.65■□□□□ 0.58
PDLIM2-203ENST00000339162 EGLN1Q9GZT9 426 aa18.65■□□□□ 0.58
PDLIM2-203ENST00000339162 NXPH3O95157 252 aa18.64■□□□□ 0.57
PDLIM2-203ENST00000339162 SERPINE2P07093 398 aa18.64■□□□□ 0.57
PDLIM2-203ENST00000339162 UQCRFS1P47985 274 aa18.64■□□□□ 0.57
PDLIM2-203ENST00000339162 ABHD14BQ96IU4 210 aa18.64■□□□□ 0.57
PDLIM2-203ENST00000339162 LRRC30A6NM36 301 aa18.64■□□□□ 0.57
PDLIM2-203ENST00000339162 NUP62P37198 522 aaPredicted RBP18.64■□□□□ 0.57
PDLIM2-203ENST00000339162 SMCO1Q147U7 214 aa18.64■□□□□ 0.57
PDLIM2-203ENST00000339162 FAM209AQ5JX71 171 aa18.64■□□□□ 0.57
PDLIM2-203ENST00000339162 BTNL3Q6UXE8 466 aa18.64■□□□□ 0.57
PDLIM2-203ENST00000339162 SPTBN1Q01082 2364 aaKnown RBP18.63■□□□□ 0.57
PDLIM2-203ENST00000339162 LEUTXA8MZ59 168 aa18.63■□□□□ 0.57
PDLIM2-203ENST00000339162 TMPRSS2O15393 492 aa18.63■□□□□ 0.57
PDLIM2-203ENST00000339162 ST8SIA5O15466 376 aa18.63■□□□□ 0.57
PDLIM2-203ENST00000339162 B3GALNT1O75752 331 aa18.63■□□□□ 0.57
PDLIM2-203ENST00000339162 GZMHP20718 246 aa18.63■□□□□ 0.57
PDLIM2-203ENST00000339162 IZUMO4Q1ZYL8 232 aa18.63■□□□□ 0.57
PDLIM2-203ENST00000339162 ZNF788Q6ZQV5 615 aa18.63■□□□□ 0.57
PDLIM2-203ENST00000339162 ZNF645Q8N7E2 425 aa18.63■□□□□ 0.57
PDLIM2-203ENST00000339162 ZNF665Q9H7R5 613 aa18.63■□□□□ 0.57
PDLIM2-203ENST00000339162 ARFGEF3Q5TH69 2177 aa18.63■□□□□ 0.57
PDLIM2-203ENST00000339162 A0A0G2JRQ6 117 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 HKR1P10072 659 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 MUC1P15941 1255 aaPredicted RBP18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 RAB14P61106 215 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 OR2B11Q5JQS5 317 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 UTF1Q5T230 341 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 TEX36Q5VZQ5 186 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 CLEC9AQ6UXN8 241 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 OR4D5Q8NGN0 318 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 AQP10Q96PS8 301 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 ZC4H2Q9NQZ6 224 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 GNG12Q9UBI6 72 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 PSG11Q9UQ72 335 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 LINC00862A6NCI5 91 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 IGKV1-39P01597 117 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 IGKV1D-39P04432 117 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 EPHA1P21709 976 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 VDAC1P21796 283 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 LINC00205P59089 165 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 NMSQ5H8A3 153 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 CLLU1Q5K131 121 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 FAM74A1Q5RGS3 127 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 SCARB1Q8WTV0 552 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 FAM122AQ96E09 287 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 LRRC46Q96FV0 321 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 MS4A5Q9H3V2 200 aa18.62■□□□□ 0.57
PDLIM2-203ENST00000339162 UBA52P62987 128 aaKnown RBP18.61■□□□□ 0.57
PDLIM2-203ENST00000339162 TFF3Q07654 80 aa18.61■□□□□ 0.57
PDLIM2-203ENST00000339162 TRAT1Q6PIZ9 186 aa18.61■□□□□ 0.57
PDLIM2-203ENST00000339162 C14orf79Q96F83 325 aa18.61■□□□□ 0.57
PDLIM2-203ENST00000339162 TMEM178BH3BS89 294 aa18.61■□□□□ 0.57
PDLIM2-203ENST00000339162 RPL12P30050 165 aaKnown RBP18.61■□□□□ 0.57
PDLIM2-203ENST00000339162 RPL30P62888 115 aaKnown RBP18.61■□□□□ 0.57
PDLIM2-203ENST00000339162 HTD2P86397 168 aa18.61■□□□□ 0.57
PDLIM2-203ENST00000339162 ZNF585BQ52M93 769 aa18.61■□□□□ 0.57
PDLIM2-203ENST00000339162 CXorf66Q5JRM2 361 aaPredicted RBP18.61■□□□□ 0.57
PDLIM2-203ENST00000339162 MARVELD3Q96A59 401 aa18.61■□□□□ 0.57
PDLIM2-203ENST00000339162 TOLLIPQ9H0E2 274 aa18.61■□□□□ 0.57
PDLIM2-203ENST00000339162 MAGT1Q9H0U3 335 aa18.61■□□□□ 0.57
PDLIM2-203ENST00000339162 TMEM106BQ9NUM4 274 aa18.61■□□□□ 0.57
PDLIM2-203ENST00000339162 ST8SIA3O43173 380 aa18.6■□□□□ 0.57
PDLIM2-203ENST00000339162 CRYZL1O95825 349 aa18.6■□□□□ 0.57
PDLIM2-203ENST00000339162 LEAP2Q969E1 77 aa18.6■□□□□ 0.57
PDLIM2-203ENST00000339162 CYTL1Q9NRR1 136 aa18.6■□□□□ 0.57
PDLIM2-203ENST00000339162 CALYQ9NYX4 217 aa18.6■□□□□ 0.57
PDLIM2-203ENST00000339162 RCL1Q9Y2P8 373 aaKnown RBP18.6■□□□□ 0.57
PDLIM2-203ENST00000339162 AUP1Q9Y679 476 aa18.6■□□□□ 0.57
PDLIM2-203ENST00000339162 B8ZZF3 427 aa18.59■□□□□ 0.57
PDLIM2-203ENST00000339162 B9A039 149 aa18.59■□□□□ 0.57
PDLIM2-203ENST00000339162 CR1LQ2VPA4 569 aa18.59■□□□□ 0.57
PDLIM2-203ENST00000339162 CCDC28AQ8IWP9 274 aa18.59■□□□□ 0.57
PDLIM2-203ENST00000339162 MUC15Q8N387 334 aa18.59■□□□□ 0.57
PDLIM2-203ENST00000339162 AGMATQ9BSE5 352 aa18.59■□□□□ 0.57
PDLIM2-203ENST00000339162 PLEKHF2Q9H8W4 249 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms