RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 SWI5Q1ZZU3 235 aa13.53□□□□□ -0.24
HPS1-202ENST00000338546 ZNF672Q499Z4 452 aaPredicted RBP13.53□□□□□ -0.24
HPS1-202ENST00000338546 C4orf17Q53FE4 359 aa13.53□□□□□ -0.24
HPS1-202ENST00000338546 NMSQ5H8A3 153 aa13.53□□□□□ -0.24
HPS1-202ENST00000338546 OR8H3Q8N146 312 aa13.53□□□□□ -0.24
HPS1-202ENST00000338546 GALNT11Q8NCW6 608 aa13.53□□□□□ -0.24
HPS1-202ENST00000338546 OR52L2PQ8NGH6 319 aa13.53□□□□□ -0.24
HPS1-202ENST00000338546 OR4D5Q8NGN0 318 aa13.53□□□□□ -0.24
HPS1-202ENST00000338546 CORO2AQ92828 525 aa13.53□□□□□ -0.24
HPS1-202ENST00000338546 LSM10Q969L4 123 aaKnown RBP13.53□□□□□ -0.24
HPS1-202ENST00000338546 FAM210AQ96ND0 272 aa13.53□□□□□ -0.24
HPS1-202ENST00000338546 LINC00574Q9H8X3 128 aa13.53□□□□□ -0.24
HPS1-202ENST00000338546 OR5AC2Q9NZP5 309 aa13.53□□□□□ -0.24
HPS1-202ENST00000338546 NSG2Q9Y328 171 aa13.53□□□□□ -0.24
HPS1-202ENST00000338546 PPIAL4EA0A075B759 164 aa13.52□□□□□ -0.25
HPS1-202ENST00000338546 PPIAL4DF5H284 164 aa13.52□□□□□ -0.25
HPS1-202ENST00000338546 FSTL3O95633 263 aa13.52□□□□□ -0.25
HPS1-202ENST00000338546 PPIAL4FP0DN26 164 aa13.52□□□□□ -0.25
HPS1-202ENST00000338546 THOC7Q6I9Y2 204 aaKnown RBP13.52□□□□□ -0.25
HPS1-202ENST00000338546 TPRX1Q8N7U7 411 aa13.52□□□□□ -0.25
HPS1-202ENST00000338546 STOML3Q8TAV4 291 aa13.52□□□□□ -0.25
HPS1-202ENST00000338546 TMEM106BQ9NUM4 274 aa13.52□□□□□ -0.25
HPS1-202ENST00000338546 KCNS2Q9ULS6 477 aa13.52□□□□□ -0.25
HPS1-202ENST00000338546 PPIAL4AQ9Y536 164 aa13.52□□□□□ -0.25
HPS1-202ENST00000338546 ATRXP46100 2492 aa13.52□□□□□ -0.25
HPS1-202ENST00000338546 CACNA1DQ01668 2161 aa13.52□□□□□ -0.25
HPS1-202ENST00000338546 TRGV10A0A0A0MS01 117 aa13.51□□□□□ -0.25
HPS1-202ENST00000338546 LINC00862A6NCI5 91 aa13.51□□□□□ -0.25
HPS1-202ENST00000338546 K7EPK0 472 aa13.51□□□□□ -0.25
HPS1-202ENST00000338546 TNFSF12O43508 249 aa13.51□□□□□ -0.25
HPS1-202ENST00000338546 NDUFA2O43678 99 aa13.51□□□□□ -0.25
HPS1-202ENST00000338546 MBPP02686 304 aaPredicted RBP13.51□□□□□ -0.25
HPS1-202ENST00000338546 LOXP28300 417 aaPredicted RBP13.51□□□□□ -0.25
HPS1-202ENST00000338546 GRNP28799 593 aaKnown RBP13.51□□□□□ -0.25
HPS1-202ENST00000338546 CATR1Q13166 79 aa13.51□□□□□ -0.25
HPS1-202ENST00000338546 EIF4EBP1Q13541 118 aaPredicted RBP13.51□□□□□ -0.25
HPS1-202ENST00000338546 FAM201AQ5SY85 155 aa13.51□□□□□ -0.25
HPS1-202ENST00000338546 GPR157Q5UAW9 335 aa13.51□□□□□ -0.25
HPS1-202ENST00000338546 ZNF66Q6ZN08 573 aa13.51□□□□□ -0.25
HPS1-202ENST00000338546 FAM71E2Q8N5Q1 922 aa13.51□□□□□ -0.25
HPS1-202ENST00000338546 UBALD1Q8TB05 177 aa13.51□□□□□ -0.25
HPS1-202ENST00000338546 ST8SIA2Q92186 375 aa13.51□□□□□ -0.25
HPS1-202ENST00000338546 RRNAD1Q96FB5 475 aaKnown RBP13.51□□□□□ -0.25
HPS1-202ENST00000338546 GAB2Q9UQC2 676 aa13.51□□□□□ -0.25
HPS1-202ENST00000338546 POMT1Q9Y6A1 747 aa13.51□□□□□ -0.25
HPS1-202ENST00000338546 DSCAMO60469 2012 aa13.51□□□□□ -0.25
HPS1-202ENST00000338546 KBTBD11-OT1A0A1B0GTJ5 212 aa13.5□□□□□ -0.25
HPS1-202ENST00000338546 A0A1B0GU03 582 aa13.5□□□□□ -0.25
HPS1-202ENST00000338546 DEFB108AA8MXU0 73 aa13.5□□□□□ -0.25
HPS1-202ENST00000338546 ATG12O94817 140 aa13.5□□□□□ -0.25
HPS1-202ENST00000338546 GYPAP02724 150 aa13.5□□□□□ -0.25
HPS1-202ENST00000338546 MMP9P14780 707 aa13.5□□□□□ -0.25
HPS1-202ENST00000338546 EDDM3BP56851 147 aa13.5□□□□□ -0.25
HPS1-202ENST00000338546 EIF5AP63241 154 aaKnown RBP13.5□□□□□ -0.25
HPS1-202ENST00000338546 MEF2CQ06413 473 aaPredicted RBP13.5□□□□□ -0.25
HPS1-202ENST00000338546 MUC15Q8N387 334 aa13.5□□□□□ -0.25
HPS1-202ENST00000338546 NEUROG1Q92886 237 aa13.5□□□□□ -0.25
HPS1-202ENST00000338546 AGMATQ9BSE5 352 aa13.5□□□□□ -0.25
HPS1-202ENST00000338546 PARP12Q9H0J9 701 aaKnown RBP13.5□□□□□ -0.25
HPS1-202ENST00000338546 OR2D2Q9H210 308 aa13.5□□□□□ -0.25
HPS1-202ENST00000338546 CALYQ9NYX4 217 aa13.5□□□□□ -0.25
HPS1-202ENST00000338546 CLN8Q9UBY8 286 aa13.5□□□□□ -0.25
HPS1-202ENST00000338546 RPS10-NUDT3A0A1W2PQS6 291 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 ZNF729A6NN14 1252 aaPredicted RBP13.49□□□□□ -0.25
HPS1-202ENST00000338546 F5H0A9 414 aaPredicted RBP13.49□□□□□ -0.25
HPS1-202ENST00000338546 TNFRSF13BO14836 293 aaPredicted RBP13.49□□□□□ -0.25
HPS1-202ENST00000338546 CLDN14O95500 239 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 PPP1CCP36873 323 aaKnown RBP13.49□□□□□ -0.25
HPS1-202ENST00000338546 P2RY1P47900 373 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 PPOXP50336 477 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 LOXL3P58215 753 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 GNMTQ14749 295 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 CDSNQ15517 529 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 MORN2Q502X0 79 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 DEFB108BQ8NET1 73 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 OR10A7Q8NGE5 316 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 OR52M1Q8NGK5 317 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 OR51H1Q8NH63 302 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 CCL13Q99616 98 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 HSD17B10Q99714 261 aaKnown RBP13.49□□□□□ -0.25
HPS1-202ENST00000338546 ZNF471Q9BX82 626 aaPredicted RBP13.49□□□□□ -0.25
HPS1-202ENST00000338546 KAAG1Q9UBP8 84 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 LPAR3Q9UBY5 353 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 LSM5Q9Y4Y9 91 aaKnown RBP13.49□□□□□ -0.25
HPS1-202ENST00000338546 hADV38S2A0JD32 116 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 SIAH2O43255 324 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 ADAM20O43506 726 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 HKR1P10072 659 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 PVALBP20472 110 aaPredicted RBP13.49□□□□□ -0.25
HPS1-202ENST00000338546 RPL12P30050 165 aaKnown RBP13.49□□□□□ -0.25
HPS1-202ENST00000338546 NKX2-1P43699 371 aaPredicted RBP13.49□□□□□ -0.25
HPS1-202ENST00000338546 RAB7AP51149 207 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 ID3Q02535 119 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 ZCCHC24Q8N2G6 241 aaKnown RBP13.49□□□□□ -0.25
HPS1-202ENST00000338546 RFESDQ8TAC1 157 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 DCTN5Q9BTE1 182 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 TAS2R3Q9NYW6 316 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 GNG12Q9UBI6 72 aa13.49□□□□□ -0.25
HPS1-202ENST00000338546 ANKHD1Q8IWZ3 2542 aaKnown RBP13.49□□□□□ -0.25
HPS1-202ENST00000338546 TANC2Q9HCD6 1990 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms