RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 OR5AC1P0C628 307 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 CCL3L1P16619 93 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 LOXL3P58215 753 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 MORN2Q502X0 79 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 TBC1D26Q86UD7 250 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 ZNF295-AS1Q8N0V1 137 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 ZNF525Q8N782 197 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 NEIL1Q96FI4 390 aaPredicted RBP12.13□□□□□ -0.47
CBX3-201ENST00000337620 ZNF714Q96N38 554 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 TOLLIPQ9H0E2 274 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 GAL3ST2Q9H3Q3 398 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 TAS2R3Q9NYW6 316 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 IDI2-AS1Q9NZ38 188 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 LPAR3Q9UBY5 353 aa12.13□□□□□ -0.47
CBX3-201ENST00000337620 YLPM1P49750 1951 aaKnown RBP12.12□□□□□ -0.47
CBX3-201ENST00000337620 SMLR1H3BR10 107 aa12.12□□□□□ -0.47
CBX3-201ENST00000337620 CCSO14618 274 aa12.12□□□□□ -0.47
CBX3-201ENST00000337620 IGHV4-39P01824 125 aa12.12□□□□□ -0.47
CBX3-201ENST00000337620 WNT2P09544 360 aa12.12□□□□□ -0.47
CBX3-201ENST00000337620 S100GP29377 79 aa12.12□□□□□ -0.47
CBX3-201ENST00000337620 EIF2B2P49770 351 aaKnown RBP12.12□□□□□ -0.47
CBX3-201ENST00000337620 ERVFRD-1P60508 538 aa12.12□□□□□ -0.47
CBX3-201ENST00000337620 PRAMEF5Q5TYX0 476 aa12.12□□□□□ -0.47
CBX3-201ENST00000337620 LEAP2Q969E1 77 aa12.12□□□□□ -0.47
CBX3-201ENST00000337620 OR2D2Q9H210 308 aa12.12□□□□□ -0.47
CBX3-201ENST00000337620 PSG11Q9UQ72 335 aa12.12□□□□□ -0.47
CBX3-201ENST00000337620 C3orf85A0A1B0GTC6 90 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 ST8SIA5O15466 376 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 PHF1O43189 567 aaPredicted RBP12.11□□□□□ -0.47
CBX3-201ENST00000337620 YPEL1O60688 119 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 PGLYRP1O75594 196 aaPredicted RBP12.11□□□□□ -0.47
CBX3-201ENST00000337620 MMP23AO75900 390 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 IGLV2-14P01704 120 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 RND3P61587 244 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 TCTE3Q8IZS6 198 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 BVESQ8NE79 360 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 EDARADDQ8WWZ3 215 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 NRGNQ92686 78 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 YPEL2Q96QA6 119 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 GFOD1Q9NXC2 390 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 USP9YO00507 2555 aaPredicted RBP12.11□□□□□ -0.47
CBX3-201ENST00000337620 FAM25EA8MYX2 175 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 RGS11O94810 467 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 H2BFSP57053 126 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 ZFP69Q49AA0 526 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 UTF1Q5T230 341 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 DCAF12L2Q5VW00 463 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 WDR25Q64LD2 544 aaPredicted RBP12.11□□□□□ -0.47
CBX3-201ENST00000337620 GALNT14Q96FL9 552 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 ABHD14BQ96IU4 210 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 AKR1E2Q96JD6 320 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 TP53RKQ96S44 253 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 LINC00574Q9H8X3 128 aa12.11□□□□□ -0.47
CBX3-201ENST00000337620 PATZ1Q9HBE1 687 aaKnown RBP12.11□□□□□ -0.47
CBX3-201ENST00000337620 TMEM187Q14656 261 aa12.1□□□□□ -0.47
CBX3-201ENST00000337620 DRAM1Q8N682 238 aa12.1□□□□□ -0.47
CBX3-201ENST00000337620 ZNF645Q8N7E2 425 aa12.1□□□□□ -0.47
CBX3-201ENST00000337620 OR51H1Q8NH63 302 aa12.1□□□□□ -0.47
CBX3-201ENST00000337620 WDR89Q96FK6 387 aaPredicted RBP12.1□□□□□ -0.47
CBX3-201ENST00000337620 SUCNR1Q9BXA5 334 aa12.1□□□□□ -0.47
CBX3-201ENST00000337620 DOCK11Q5JSL3 2073 aa12.1□□□□□ -0.47
CBX3-201ENST00000337620 CELSR2Q9HCU4 2923 aa12.1□□□□□ -0.47
CBX3-201ENST00000337620 TRBV23-1A0A0A0MS06 115 aa12.1□□□□□ -0.47
CBX3-201ENST00000337620 A0A0B4J2A0 478 aa12.1□□□□□ -0.47
CBX3-201ENST00000337620 DBX1A6NMT0 343 aa12.1□□□□□ -0.47
CBX3-201ENST00000337620 GPR37O15354 613 aa12.1□□□□□ -0.47
CBX3-201ENST00000337620 ADAP1O75689 374 aa12.1□□□□□ -0.47
CBX3-201ENST00000337620 ZNF134P52741 427 aa12.1□□□□□ -0.47
CBX3-201ENST00000337620 GNB2P62879 340 aa12.1□□□□□ -0.47
CBX3-201ENST00000337620 LY6G6FQ5SQ64 297 aa12.1□□□□□ -0.47
CBX3-201ENST00000337620 OR5M8Q8NGP6 311 aa12.1□□□□□ -0.47
CBX3-201ENST00000337620 GLYATL2Q8WU03 294 aa12.1□□□□□ -0.47
CBX3-201ENST00000337620 AGMATQ9BSE5 352 aa12.1□□□□□ -0.47
CBX3-201ENST00000337620 METTL8Q9H825 291 aaKnown RBP12.1□□□□□ -0.47
CBX3-201ENST00000337620 SHPKQ9UHJ6 478 aa12.1□□□□□ -0.47
CBX3-201ENST00000337620 CENPEQ02224 2701 aa12.09□□□□□ -0.47
CBX3-201ENST00000337620 ASH1LQ9NR48 2969 aaKnown RBP12.09□□□□□ -0.47
CBX3-201ENST00000337620 C13orf42A0A1B0GVH6 325 aa12.09□□□□□ -0.47
CBX3-201ENST00000337620 A0A1W2PPE3 182 aa12.09□□□□□ -0.47
CBX3-201ENST00000337620 HOXB5P09067 269 aa12.09□□□□□ -0.47
CBX3-201ENST00000337620 GIPP09681 153 aaPredicted RBP12.09□□□□□ -0.47
CBX3-201ENST00000337620 ZNF16P17020 682 aaPredicted RBP12.09□□□□□ -0.47
CBX3-201ENST00000337620 PDLIM4P50479 330 aa12.09□□□□□ -0.47
CBX3-201ENST00000337620 NKX2-5P52952 324 aaPredicted RBP12.09□□□□□ -0.47
CBX3-201ENST00000337620 ATP5J2P56134 94 aa12.09□□□□□ -0.47
CBX3-201ENST00000337620 HEPN1Q6WQI6 88 aa12.09□□□□□ -0.47
CBX3-201ENST00000337620 SEC22AQ96IW7 307 aa12.09□□□□□ -0.47
CBX3-201ENST00000337620 PDCD10Q9BUL8 212 aa12.09□□□□□ -0.47
CBX3-201ENST00000337620 PIPOXQ9P0Z9 390 aa12.09□□□□□ -0.47
CBX3-201ENST00000337620 RPUSD1Q9UJJ7 312 aaKnown RBP12.09□□□□□ -0.47
CBX3-201ENST00000337620 MALRD1Q5VYJ5 2156 aa12.09□□□□□ -0.47
CBX3-201ENST00000337620 C5orf51A6NDU8 294 aa12.08□□□□□ -0.47
CBX3-201ENST00000337620 SLC31A2O15432 143 aa12.08□□□□□ -0.47
CBX3-201ENST00000337620 OR2A4O95047 310 aa12.08□□□□□ -0.47
CBX3-201ENST00000337620 F2RP25116 425 aa12.08□□□□□ -0.47
CBX3-201ENST00000337620 GNG10P50151 68 aa12.08□□□□□ -0.47
CBX3-201ENST00000337620 ZNF787Q6DD87 383 aa12.08□□□□□ -0.47
CBX3-201ENST00000337620 LIAT1Q6ZQX7 453 aa12.08□□□□□ -0.47
CBX3-201ENST00000337620 OR52M1Q8NGK5 317 aa12.08□□□□□ -0.47
CBX3-201ENST00000337620 OR2T35Q8NGX2 323 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms